RNA–Protein interactions for RNA: ENST00000563969.5

PLEKHG4-209, Transcript of pleckstrin homology and RhoGEF domain containing G4, humanhuman

TSL 2

Gene PLEKHG4, Length 6,949 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHG4-209ENST00000563969 DCAF8L2P0C7V8 631 aa31.32■■■□□ 2.6
PLEKHG4-209ENST00000563969 EHMT2Q96KQ7 1210 aa28.64■■■□□ 2.17
PLEKHG4-209ENST00000563969 SUPT5HO00267 1087 aaKnown RBP28.61■■■□□ 2.17
PLEKHG4-209ENST00000563969 SHROOM4Q9ULL8 1493 aa28.44■■■□□ 2.14
PLEKHG4-209ENST00000563969 NISCHQ9Y2I1 1504 aa27.93■■■□□ 2.06
PLEKHG4-209ENST00000563969 RANGAP1P46060 587 aaPredicted RBP27.44■■□□□ 1.98
PLEKHG4-209ENST00000563969 TTBK1Q5TCY1 1321 aaPredicted RBP27.41■■□□□ 1.98
PLEKHG4-209ENST00000563969 FAM9AQ8IZU1 332 aaPredicted RBP27.27■■□□□ 1.96
PLEKHG4-209ENST00000563969 APLP2Q06481 763 aa27.18■■□□□ 1.94
PLEKHG4-209ENST00000563969 ATP1B4Q9UN42 357 aaPredicted RBP27.15■■□□□ 1.94
PLEKHG4-209ENST00000563969 PELP1Q8IZL8 1130 aaKnown RBP27.03■■□□□ 1.92
PLEKHG4-209ENST00000563969 MYT1LQ9UL68 1186 aa26.46■■□□□ 1.83
PLEKHG4-209ENST00000563969 ERICH6Q7L0X2 663 aa26.39■■□□□ 1.81
PLEKHG4-209ENST00000563969 CHIC1Q5VXU3 224 aa26.33■■□□□ 1.81
PLEKHG4-209ENST00000563969 UBTFP17480 764 aaKnown RBP26.27■■□□□ 1.8
PLEKHG4-209ENST00000563969 TRIM41Q8WV44 630 aa26.22■■□□□ 1.79
PLEKHG4-209ENST00000563969 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.18■■□□□ 1.78
PLEKHG4-209ENST00000563969 HNRNPUL2Q1KMD3 747 aaKnown RBP26.18■■□□□ 1.78
PLEKHG4-209ENST00000563969 PCGF6Q9BYE7 350 aa26.18■■□□□ 1.78
PLEKHG4-209ENST00000563969 PPARGC1BQ86YN6 1023 aaKnown RBP26.01■■□□□ 1.75
PLEKHG4-209ENST00000563969 CCER1Q8TC90 406 aaPredicted RBP25.94■■□□□ 1.74
PLEKHG4-209ENST00000563969 PABPN1Q86U42 306 aaKnown RBP eCLIP25.83■■□□□ 1.732e-7■■■■■ 27.8
PLEKHG4-209ENST00000563969 POLR3GLQ9BT43 218 aa25.8■■□□□ 1.72
PLEKHG4-209ENST00000563969 ITGAEP38570 1179 aa25.76■■□□□ 1.71
PLEKHG4-209ENST00000563969 SLC4A1APQ9BWU0 796 aaKnown RBP25.7■■□□□ 1.7
PLEKHG4-209ENST00000563969 CNGB1Q14028 1251 aaPredicted RBP25.68■■□□□ 1.7
PLEKHG4-209ENST00000563969 ABCC9O60706 1549 aa25.66■■□□□ 1.7
PLEKHG4-209ENST00000563969 NEFLP07196 543 aa25.54■■□□□ 1.68
PLEKHG4-209ENST00000563969 YTHDC1Q96MU7 727 aaKnown RBP25.52■■□□□ 1.68
PLEKHG4-209ENST00000563969 MYT1Q01538 1121 aa25.5■■□□□ 1.67
PLEKHG4-209ENST00000563969 FBLN2P98095 1184 aa25.49■■□□□ 1.67
PLEKHG4-209ENST00000563969 CENPBP07199 599 aaPredicted RBP25.39■■□□□ 1.66
PLEKHG4-209ENST00000563969 DAXXQ9UER7 740 aaPredicted RBP25.35■■□□□ 1.65
PLEKHG4-209ENST00000563969 PLPPR3Q6T4P5 718 aa25.25■■□□□ 1.63
PLEKHG4-209ENST00000563969 SLC24A1O60721 1099 aa25.1■■□□□ 1.61
PLEKHG4-209ENST00000563969 ARID3CA6NKF2 412 aa25.06■■□□□ 1.6
PLEKHG4-209ENST00000563969 BCANQ96GW7 911 aa25■■□□□ 1.59
PLEKHG4-209ENST00000563969 BCL11AQ9H165 835 aa24.94■■□□□ 1.58
PLEKHG4-209ENST00000563969 LOC105371045A0A1W2PR82 267 aa24.92■■□□□ 1.58
PLEKHG4-209ENST00000563969 FAM50AQ14320 339 aaKnown RBP24.91■■□□□ 1.58
PLEKHG4-209ENST00000563969 CLSPNQ9HAW4 1339 aa24.9■■□□□ 1.58
PLEKHG4-209ENST00000563969 TRIM52Q96A61 297 aa24.82■■□□□ 1.56
PLEKHG4-209ENST00000563969 ZEB1P37275 1124 aaPredicted RBP24.79■■□□□ 1.56
PLEKHG4-209ENST00000563969 P3H3Q8IVL6 736 aa24.72■■□□□ 1.55
PLEKHG4-209ENST00000563969 ZNF326Q5BKZ1 582 aaKnown RBP24.69■■□□□ 1.54
PLEKHG4-209ENST00000563969 ZNF316A6NFI3 1004 aaPredicted RBP24.64■■□□□ 1.54
PLEKHG4-209ENST00000563969 NEUROD1Q13562 356 aa24.56■■□□□ 1.52
PLEKHG4-209ENST00000563969 ZNF777Q9ULD5 760 aaPredicted RBP24.54■■□□□ 1.52
PLEKHG4-209ENST00000563969 ZBTB47Q9UFB7 747 aaPredicted RBP24.52■■□□□ 1.52
PLEKHG4-209ENST00000563969 ESF1Q9H501 851 aaKnown RBP24.5■■□□□ 1.51
PLEKHG4-209ENST00000563969 SENP3Q9H4L4 574 aaPredicted RBP24.38■■□□□ 1.49
PLEKHG4-209ENST00000563969 TRIM26Q12899 539 aaPredicted RBP24.35■■□□□ 1.49
PLEKHG4-209ENST00000563969 CHGAP10645 457 aaKnown RBP24.33■■□□□ 1.49
PLEKHG4-209ENST00000563969 STAG3Q9UJ98 1225 aa24.32■■□□□ 1.48
PLEKHG4-209ENST00000563969 NPM1P06748 294 aaKnown RBP eCLIP24.3■■□□□ 1.48
PLEKHG4-209ENST00000563969 PLEKHG5O94827 1062 aa24.3■■□□□ 1.48
PLEKHG4-209ENST00000563969 A0A0G2JS52 829 aa24.28■■□□□ 1.48
PLEKHG4-209ENST00000563969 SCAF1Q9H7N4 1312 aaKnown RBP24.24■■□□□ 1.47
PLEKHG4-209ENST00000563969 RTL5Q5HYW3 569 aaPredicted RBP24.18■■□□□ 1.46
PLEKHG4-209ENST00000563969 NEFMP07197 916 aa24.17■■□□□ 1.46
PLEKHG4-209ENST00000563969 CANXP27824 592 aaKnown RBP24.17■■□□□ 1.46
PLEKHG4-209ENST00000563969 SCRIBQ14160 1630 aa24.11■■□□□ 1.45
PLEKHG4-209ENST00000563969 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.01■■□□□ 1.43
PLEKHG4-209ENST00000563969 ZBTB7CA1YPR0 619 aa23.95■■□□□ 1.42
PLEKHG4-209ENST00000563969 CHMP7Q8WUX9 453 aaPredicted RBP23.9■■□□□ 1.42
PLEKHG4-209ENST00000563969 TRHP20396 242 aaPredicted RBP23.89■■□□□ 1.42
PLEKHG4-209ENST00000563969 HRCP23327 699 aa23.88■■□□□ 1.41
PLEKHG4-209ENST00000563969 KCNH8Q96L42 1107 aa23.86■■□□□ 1.41
PLEKHG4-209ENST00000563969 ARID4BQ4LE39 1312 aaPredicted RBP23.86■■□□□ 1.41
PLEKHG4-209ENST00000563969 CDK11AQ9UQ88 783 aaPredicted RBP23.82■■□□□ 1.4
PLEKHG4-209ENST00000563969 CHIC2Q9UKJ5 165 aa23.77■■□□□ 1.4
PLEKHG4-209ENST00000563969 C14orf37Q86TY3 774 aa23.76■■□□□ 1.39
PLEKHG4-209ENST00000563969 TULP1O00294 542 aaPredicted RBP23.62■■□□□ 1.37
PLEKHG4-209ENST00000563969 NPM2Q86SE8 214 aaKnown RBP23.61■■□□□ 1.37
PLEKHG4-209ENST00000563969 CSRNP3Q8WYN3 585 aa23.6■■□□□ 1.37
PLEKHG4-209ENST00000563969 ANP32CO43423 234 aa23.59■■□□□ 1.37
PLEKHG4-209ENST00000563969 HAP1P54257 671 aaPredicted RBP23.58■■□□□ 1.37
PLEKHG4-209ENST00000563969 KDM2AQ9Y2K7 1162 aa23.58■■□□□ 1.37
PLEKHG4-209ENST00000563969 DIEXFQ68CQ4 756 aaKnown RBP23.57■■□□□ 1.36
PLEKHG4-209ENST00000563969 ERCC6Q03468 1493 aa23.56■■□□□ 1.36
PLEKHG4-209ENST00000563969 PPP1R15AO75807 674 aaPredicted RBP23.53■■□□□ 1.36
PLEKHG4-209ENST00000563969 HSP90AA1P07900 732 aaKnown RBP23.53■■□□□ 1.36
PLEKHG4-209ENST00000563969 ARXQ96QS3 562 aa23.53■■□□□ 1.36
PLEKHG4-209ENST00000563969 SALL2Q9Y467 1007 aaPredicted RBP23.53■■□□□ 1.36
PLEKHG4-209ENST00000563969 CDK11BP21127 795 aaKnown RBP23.5■■□□□ 1.35
PLEKHG4-209ENST00000563969 MLECQ14165 292 aa23.4■■□□□ 1.34
PLEKHG4-209ENST00000563969 LMOD2Q6P5Q4 547 aa23.39■■□□□ 1.34
PLEKHG4-209ENST00000563969 NCBP3Q53F19 620 aaKnown RBP23.38■■□□□ 1.33
PLEKHG4-209ENST00000563969 GTF3C3Q9Y5Q9 886 aa23.38■■□□□ 1.33
PLEKHG4-209ENST00000563969 TSPY4P0CV99 314 aa23.37■■□□□ 1.33
PLEKHG4-209ENST00000563969 TSPY10P0CW01 314 aa23.37■■□□□ 1.33
PLEKHG4-209ENST00000563969 NPHP1O15259 732 aa23.3■■□□□ 1.32
PLEKHG4-209ENST00000563969 EIF5BO60841 1220 aaKnown RBP23.29■■□□□ 1.32
PLEKHG4-209ENST00000563969 ANP32BQ92688 251 aaKnown RBP23.28■■□□□ 1.32
PLEKHG4-209ENST00000563969 RRP7BPQ9NSQ0 103 aa23.23■■□□□ 1.31
PLEKHG4-209ENST00000563969 RGL3Q3MIN7 710 aa23.23■■□□□ 1.31
PLEKHG4-209ENST00000563969 RB1CC1Q8TDY2 1594 aa23.21■■□□□ 1.31
PLEKHG4-209ENST00000563969 TMC1Q8TDI8 760 aa23.19■■□□□ 1.3
PLEKHG4-209ENST00000563969 TONSLQ96HA7 1378 aa23.18■■□□□ 1.3
PLEKHG4-209ENST00000563969 MTUS2Q5JR59 1369 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms