RNA–Protein interactions for RNA: ENST00000561920.5

PDPR-203, Transcript of pyruvate dehydrogenase phosphatase regulatory subunit, humanhuman

TSL 5

Gene PDPR, Length 2,194 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPR-203ENST00000561920 NISCHQ9Y2I1 1504 aa31.57■■■□□ 2.64
PDPR-203ENST00000561920 CCDC180Q9P1Z9 1646 aa26.83■■□□□ 1.89
PDPR-203ENST00000561920 SHROOM4Q9ULL8 1493 aa26.83■■□□□ 1.89
PDPR-203ENST00000561920 ZCCHC6Q5VYS8 1495 aaKnown RBP26.69■■□□□ 1.86
PDPR-203ENST00000561920 SUPT5HO00267 1087 aaKnown RBP26.23■■□□□ 1.79
PDPR-203ENST00000561920 DCAF8L2P0C7V8 631 aa26.1■■□□□ 1.77
PDPR-203ENST00000561920 DCAF1Q9Y4B6 1507 aa25.89■■□□□ 1.73
PDPR-203ENST00000561920 CHIC1Q5VXU3 224 aa25.53■■□□□ 1.68
PDPR-203ENST00000561920 MYO15BQ96JP2 1530 aa25.48■■□□□ 1.67
PDPR-203ENST00000561920 SCRIBQ14160 1630 aa25.16■■□□□ 1.62
PDPR-203ENST00000561920 ABCC9O60706 1549 aa25.15■■□□□ 1.62
PDPR-203ENST00000561920 RSF1Q96T23 1441 aaPredicted RBP24.97■■□□□ 1.59
PDPR-203ENST00000561920 NACADO15069 1562 aa24.82■■□□□ 1.56
PDPR-203ENST00000561920 LOC105371045A0A1W2PR82 267 aa24.79■■□□□ 1.56
PDPR-203ENST00000561920 RB1CC1Q8TDY2 1594 aa24.69■■□□□ 1.54
PDPR-203ENST00000561920 CECR2Q9BXF3 1484 aa24.68■■□□□ 1.54
PDPR-203ENST00000561920 PCGF6Q9BYE7 350 aa24.59■■□□□ 1.53
PDPR-203ENST00000561920 MROH2BQ7Z745 1585 aa24.57■■□□□ 1.52
PDPR-203ENST00000561920 HRCP23327 699 aa24.54■■□□□ 1.52
PDPR-203ENST00000561920 WIZO95785 1651 aa24.43■■□□□ 1.5
PDPR-203ENST00000561920 TRIM41Q8WV44 630 aa24.42■■□□□ 1.5
PDPR-203ENST00000561920 FAM9AQ8IZU1 332 aaPredicted RBP24.25■■□□□ 1.47
PDPR-203ENST00000561920 BAZ1AQ9NRL2 1556 aaPredicted RBP24.22■■□□□ 1.47
PDPR-203ENST00000561920 UNC13AQ9UPW8 1703 aa24.17■■□□□ 1.46
PDPR-203ENST00000561920 PPARGC1BQ86YN6 1023 aaKnown RBP24.12■■□□□ 1.45
PDPR-203ENST00000561920 TRIM26Q12899 539 aaPredicted RBP24.12■■□□□ 1.45
PDPR-203ENST00000561920 EIF4G1Q04637 1599 aaKnown RBP24.1■■□□□ 1.45
PDPR-203ENST00000561920 SMARCA4P51532 1647 aa24.06■■□□□ 1.44
PDPR-203ENST00000561920 EHMT2Q96KQ7 1210 aa24.04■■□□□ 1.44
PDPR-203ENST00000561920 TOP2AP11388 1531 aaKnown RBP24■■□□□ 1.43
PDPR-203ENST00000561920 CCDC88BA6NC98 1476 aa23.93■■□□□ 1.42
PDPR-203ENST00000561920 SMARCA2P51531 1590 aa23.9■■□□□ 1.42
PDPR-203ENST00000561920 BICRAQ9NZM4 1560 aa23.88■■□□□ 1.41
PDPR-203ENST00000561920 PABPN1Q86U42 306 aaKnown RBP eCLIP23.86■■□□□ 1.41
PDPR-203ENST00000561920 ABCC8Q09428 1581 aa23.84■■□□□ 1.41
PDPR-203ENST00000561920 PEG3Q9GZU2 1588 aa23.61■■□□□ 1.37
PDPR-203ENST00000561920 SOGA1O94964 1423 aa23.61■■□□□ 1.37
PDPR-203ENST00000561920 RUSC2Q8N2Y8 1516 aa23.54■■□□□ 1.36
PDPR-203ENST00000561920 ATAD2BQ9ULI0 1458 aa23.47■■□□□ 1.35
PDPR-203ENST00000561920 ZEB1P37275 1124 aaPredicted RBP23.45■■□□□ 1.35
PDPR-203ENST00000561920 CEP162Q5TB80 1403 aa23.41■■□□□ 1.34
PDPR-203ENST00000561920 CSRNP3Q8WYN3 585 aa23.4■■□□□ 1.34
PDPR-203ENST00000561920 WRNQ14191 1432 aaPredicted RBP eCLIP23.4■■□□□ 1.34
PDPR-203ENST00000561920 TNIKQ9UKE5 1360 aa23.37■■□□□ 1.33
PDPR-203ENST00000561920 EEA1Q15075 1411 aa23.36■■□□□ 1.33
PDPR-203ENST00000561920 SYNJ1O43426 1573 aa23.35■■□□□ 1.33
PDPR-203ENST00000561920 BAZ1BQ9UIG0 1483 aaKnown RBP23.34■■□□□ 1.33
PDPR-203ENST00000561920 UBTFP17480 764 aaKnown RBP23.25■■□□□ 1.31
PDPR-203ENST00000561920 TTBK1Q5TCY1 1321 aaPredicted RBP23.23■■□□□ 1.31
PDPR-203ENST00000561920 GOLGA3Q08378 1498 aa23.23■■□□□ 1.31
PDPR-203ENST00000561920 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.22■■□□□ 1.31
PDPR-203ENST00000561920 KIF21BO75037 1637 aa23.11■■□□□ 1.29
PDPR-203ENST00000561920 CEP164Q9UPV0 1460 aa23.11■■□□□ 1.29
PDPR-203ENST00000561920 CCER1Q8TC90 406 aaPredicted RBP23.07■■□□□ 1.28
PDPR-203ENST00000561920 TOP2BQ02880 1626 aa23.04■■□□□ 1.28
PDPR-203ENST00000561920 RAPGEF2Q9Y4G8 1499 aa23.03■■□□□ 1.28
PDPR-203ENST00000561920 NCAPD3P42695 1498 aa23.01■■□□□ 1.27
PDPR-203ENST00000561920 HMGXB3Q12766 1538 aa22.98■■□□□ 1.27
PDPR-203ENST00000561920 CLIP1P30622 1438 aa22.97■■□□□ 1.27
PDPR-203ENST00000561920 BIVM-ERCC5R4GMW8 1640 aa22.96■■□□□ 1.27
PDPR-203ENST00000561920 VPS8Q8N3P4 1428 aa22.87■■□□□ 1.25
PDPR-203ENST00000561920 CUX1P39880 1505 aa22.87■■□□□ 1.25
PDPR-203ENST00000561920 RANGAP1P46060 587 aaPredicted RBP22.84■■□□□ 1.25
PDPR-203ENST00000561920 CFTRP13569 1480 aa22.81■■□□□ 1.24
PDPR-203ENST00000561920 PRXQ9BXM0 1461 aa22.81■■□□□ 1.24
PDPR-203ENST00000561920 ERICH3Q5RHP9 1530 aa22.74■■□□□ 1.23
PDPR-203ENST00000561920 HNRNPUL2Q1KMD3 747 aaKnown RBP22.72■■□□□ 1.23
PDPR-203ENST00000561920 ARAP1Q96P48 1450 aa22.69■■□□□ 1.22
PDPR-203ENST00000561920 KIF27Q86VH2 1401 aa22.65■■□□□ 1.22
PDPR-203ENST00000561920 APLP2Q06481 763 aa22.62■■□□□ 1.21
PDPR-203ENST00000561920 DIEXFQ68CQ4 756 aaKnown RBP22.59■■□□□ 1.21
PDPR-203ENST00000561920 PRDM2Q13029 1718 aa22.59■■□□□ 1.21
PDPR-203ENST00000561920 SCAF1Q9H7N4 1312 aaKnown RBP22.58■■□□□ 1.21
PDPR-203ENST00000561920 KANK4Q5T7N3 995 aaPredicted RBP22.56■■□□□ 1.2
PDPR-203ENST00000561920 CADPSQ9ULU8 1353 aa22.55■■□□□ 1.2
PDPR-203ENST00000561920 IGF1RP08069 1367 aa22.5■■□□□ 1.19
PDPR-203ENST00000561920 ARHGAP35Q9NRY4 1499 aa22.49■■□□□ 1.19
PDPR-203ENST00000561920 CUX2O14529 1486 aa22.49■■□□□ 1.19
PDPR-203ENST00000561920 CC2D2AQ9P2K1 1620 aa22.48■■□□□ 1.19
PDPR-203ENST00000561920 ZNF316A6NFI3 1004 aaPredicted RBP22.46■■□□□ 1.19
PDPR-203ENST00000561920 FGD5Q6ZNL6 1462 aa22.44■■□□□ 1.18
PDPR-203ENST00000561920 NEUROD1Q13562 356 aa22.38■■□□□ 1.17
PDPR-203ENST00000561920 CARMIL1Q5VZK9 1371 aa22.36■■□□□ 1.17
PDPR-203ENST00000561920 ACIN1Q9UKV3 1341 aaKnown RBP22.35■■□□□ 1.17
PDPR-203ENST00000561920 RRBP1Q9P2E9 1410 aaKnown RBP22.35■■□□□ 1.17
PDPR-203ENST00000561920 FANCD2Q9BXW9 1451 aa22.33■■□□□ 1.17
PDPR-203ENST00000561920 DHX57Q6P158 1386 aaKnown RBP22.31■■□□□ 1.16
PDPR-203ENST00000561920 NESP48681 1621 aa22.27■■□□□ 1.16
PDPR-203ENST00000561920 RAD54L2Q9Y4B4 1467 aa22.26■■□□□ 1.15
PDPR-203ENST00000561920 CCNB3Q8WWL7 1395 aa22.23■■□□□ 1.15
PDPR-203ENST00000561920 DNMBPQ6XZF7 1577 aa22.21■■□□□ 1.15
PDPR-203ENST00000561920 TOPBP1Q92547 1522 aa22.2■■□□□ 1.14
PDPR-203ENST00000561920 TIAM1Q13009 1591 aa22.19■■□□□ 1.14
PDPR-203ENST00000561920 POLA1P09884 1462 aaPredicted RBP22.19■■□□□ 1.14
PDPR-203ENST00000561920 MIER1Q8N108 512 aa22.18■■□□□ 1.14
PDPR-203ENST00000561920 CLSPNQ9HAW4 1339 aa22.18■■□□□ 1.14
PDPR-203ENST00000561920 ABCA10Q8WWZ4 1543 aa22.17■■□□□ 1.14
PDPR-203ENST00000561920 MAP3K1Q13233 1512 aa22.16■■□□□ 1.14
PDPR-203ENST00000561920 P3H3Q8IVL6 736 aa22.14■■□□□ 1.13
PDPR-203ENST00000561920 ITGAEP38570 1179 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms