RNA–Protein interactions for RNA: ENST00000560737.5

PSMA4-220, Transcript of proteasome subunit alpha 4, humanhuman

TSL 5

Gene PSMA4, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-220ENST00000560737 AEBP2Q6ZN18 517 aaPredicted RBP21.26■□□□□ 0.99
PSMA4-220ENST00000560737 CHIC1Q5VXU3 224 aa21.04■□□□□ 0.96
PSMA4-220ENST00000560737 PHF23Q9BUL5 403 aaPredicted RBP18.49■□□□□ 0.55
PSMA4-220ENST00000560737 SENP3Q9H4L4 574 aaPredicted RBP18.07■□□□□ 0.48
PSMA4-220ENST00000560737 POTEDQ86YR6 584 aa18■□□□□ 0.47
PSMA4-220ENST00000560737 PLPPR3Q6T4P5 718 aa17.23■□□□□ 0.35
PSMA4-220ENST00000560737 FOXD1Q16676 465 aa16.7■□□□□ 0.26
PSMA4-220ENST00000560737 ADRA2BP18089 450 aa16.27■□□□□ 0.2
PSMA4-220ENST00000560737 PPP6R1Q9UPN7 881 aa16.24■□□□□ 0.19
PSMA4-220ENST00000560737 MSH5O43196 834 aa15.9■□□□□ 0.14
PSMA4-220ENST00000560737 PIAS4Q8N2W9 510 aaPredicted RBP15.87■□□□□ 0.13
PSMA4-220ENST00000560737 PPP4R3CPQ6ZMV5 832 aa15.2■□□□□ 0.02
PSMA4-220ENST00000560737 KCNA4P22459 653 aa15.13■□□□□ 0.01
PSMA4-220ENST00000560737 SCAF1Q9H7N4 1312 aaKnown RBP14.94□□□□□ -0.02
PSMA4-220ENST00000560737 NCBP3Q53F19 620 aaKnown RBP14.91□□□□□ -0.02
PSMA4-220ENST00000560737 CNKSR2Q8WXI2 1034 aa14.72□□□□□ -0.05
PSMA4-220ENST00000560737 MAPK8IP2Q13387 824 aaPredicted RBP14.67□□□□□ -0.06
PSMA4-220ENST00000560737 NPM3O75607 178 aaKnown RBP14.64□□□□□ -0.07
PSMA4-220ENST00000560737 CACNB1Q02641 598 aaPredicted RBP14.55□□□□□ -0.08
PSMA4-220ENST00000560737 SLC4A1APQ9BWU0 796 aaKnown RBP14.48□□□□□ -0.09
PSMA4-220ENST00000560737 DMRT2Q9Y5R5 561 aa14.44□□□□□ -0.1
PSMA4-220ENST00000560737 EHMT2Q96KQ7 1210 aa14.39□□□□□ -0.11
PSMA4-220ENST00000560737 RNF216Q9NWF9 866 aaPredicted RBP14.36□□□□□ -0.11
PSMA4-220ENST00000560737 HOXD11P31277 338 aaPredicted RBP14.21□□□□□ -0.13
PSMA4-220ENST00000560737 DNAJC5BQ9UF47 199 aa14.12□□□□□ -0.15
PSMA4-220ENST00000560737 CSRNP3Q8WYN3 585 aa14.03□□□□□ -0.16
PSMA4-220ENST00000560737 DCAF8L1A6NGE4 600 aa13.9□□□□□ -0.18
PSMA4-220ENST00000560737 ZBTB22O15209 634 aa13.9□□□□□ -0.18
PSMA4-220ENST00000560737 FOXD4L1Q9NU39 408 aa13.87□□□□□ -0.19
PSMA4-220ENST00000560737 POTEHQ6S545 545 aa13.82□□□□□ -0.2
PSMA4-220ENST00000560737 SLC4A2P04920 1241 aa13.74□□□□□ -0.21
PSMA4-220ENST00000560737 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.63□□□□□ -0.23
PSMA4-220ENST00000560737 MYCNP04198 464 aaPredicted RBP13.56□□□□□ -0.24
PSMA4-220ENST00000560737 RNF39Q9H2S5 420 aa13.46□□□□□ -0.25
PSMA4-220ENST00000560737 U3KPZ7 1027 aaPredicted RBP13.39□□□□□ -0.27
PSMA4-220ENST00000560737 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.36□□□□□ -0.27
PSMA4-220ENST00000560737 HNRNPUL2Q1KMD3 747 aaKnown RBP13.36□□□□□ -0.27
PSMA4-220ENST00000560737 ATXN8OSP0DMR3 200 aa13.34□□□□□ -0.27
PSMA4-220ENST00000560737 SAMD1Q6SPF0 538 aaPredicted RBP13.31□□□□□ -0.28
PSMA4-220ENST00000560737 APLP2Q06481 763 aa13.17□□□□□ -0.3
PSMA4-220ENST00000560737 C1QBPQ07021 282 aaKnown RBP13.16□□□□□ -0.3
PSMA4-220ENST00000560737 ATF5Q9Y2D1 282 aaPredicted RBP13.12□□□□□ -0.31
PSMA4-220ENST00000560737 SPINK5Q9NQ38 1064 aaPredicted RBP12.94□□□□□ -0.34
PSMA4-220ENST00000560737 ZNF219Q9P2Y4 722 aaPredicted RBP12.94□□□□□ -0.34
PSMA4-220ENST00000560737 CAPN15O75808 1086 aa12.93□□□□□ -0.34
PSMA4-220ENST00000560737 TRHP20396 242 aaPredicted RBP12.93□□□□□ -0.34
PSMA4-220ENST00000560737 POLA2Q14181 598 aa12.75□□□□□ -0.37
PSMA4-220ENST00000560737 FKBP8Q14318 412 aa12.73□□□□□ -0.37
PSMA4-220ENST00000560737 ABCB7O75027 752 aa12.69□□□□□ -0.38
PSMA4-220ENST00000560737 FBLN2P98095 1184 aa12.64□□□□□ -0.39
PSMA4-220ENST00000560737 DSG3P32926 999 aa12.59□□□□□ -0.39
PSMA4-220ENST00000560737 ZBTB12Q9Y330 459 aaPredicted RBP12.59□□□□□ -0.39
PSMA4-220ENST00000560737 MKRN4PQ13434 485 aaPredicted RBP12.57□□□□□ -0.4
PSMA4-220ENST00000560737 SPDYE4A6NLX3 237 aa12.47□□□□□ -0.41
PSMA4-220ENST00000560737 OSCARQ8IYS5 282 aa12.32□□□□□ -0.44
PSMA4-220ENST00000560737 SP7Q8TDD2 431 aaPredicted RBP12.27□□□□□ -0.45
PSMA4-220ENST00000560737 ZNF692Q9BU19 519 aaPredicted RBP12.24□□□□□ -0.45
PSMA4-220ENST00000560737 SPDYE2BA6NHP3 402 aa12.23□□□□□ -0.45
PSMA4-220ENST00000560737 SPDYE6P0CI01 402 aa12.23□□□□□ -0.45
PSMA4-220ENST00000560737 SPDYE2Q495Y8 402 aa12.23□□□□□ -0.45
PSMA4-220ENST00000560737 PROM2Q8N271 834 aa12.22□□□□□ -0.45
PSMA4-220ENST00000560737 FBXO3Q9UK99 471 aa12.22□□□□□ -0.45
PSMA4-220ENST00000560737 SSUH2Q9Y2M2 353 aa12.14□□□□□ -0.47
PSMA4-220ENST00000560737 PABPN1Q86U42 306 aaKnown RBP eCLIP12.09□□□□□ -0.47
PSMA4-220ENST00000560737 RBM42Q9BTD8 480 aaKnown RBP12.05□□□□□ -0.48
PSMA4-220ENST00000560737 VASPP50552 380 aaPredicted RBP12.03□□□□□ -0.48
PSMA4-220ENST00000560737 AMER1Q5JTC6 1135 aaPredicted RBP12.03□□□□□ -0.48
PSMA4-220ENST00000560737 PLSCR2Q9NRY7 297 aa12.01□□□□□ -0.49
PSMA4-220ENST00000560737 RTN4Q9NQC3 1192 aaKnown RBP12□□□□□ -0.49
PSMA4-220ENST00000560737 STAG3Q9UJ98 1225 aa11.94□□□□□ -0.5
PSMA4-220ENST00000560737 CHRDL2Q6WN34 429 aa11.92□□□□□ -0.5
PSMA4-220ENST00000560737 AKT1S1Q96B36 256 aa11.91□□□□□ -0.5
PSMA4-220ENST00000560737 PLCD3Q8N3E9 789 aa11.85□□□□□ -0.51
PSMA4-220ENST00000560737 IFNLR1Q8IU57 520 aaPredicted RBP11.84□□□□□ -0.51
PSMA4-220ENST00000560737 SPDYE1Q8NFV5 336 aaPredicted RBP11.83□□□□□ -0.52
PSMA4-220ENST00000560737 MIER1Q8N108 512 aa11.81□□□□□ -0.52
PSMA4-220ENST00000560737 KLHL34Q8N239 644 aa11.81□□□□□ -0.52
PSMA4-220ENST00000560737 REM2Q8IYK8 340 aaPredicted RBP11.8□□□□□ -0.52
PSMA4-220ENST00000560737 CLEC11AQ9Y240 323 aa11.79□□□□□ -0.52
PSMA4-220ENST00000560737 PLEKHG5O94827 1062 aa11.78□□□□□ -0.52
PSMA4-220ENST00000560737 PRR29P0C7W0 189 aa11.7□□□□□ -0.54
PSMA4-220ENST00000560737 SPOCK2Q92563 424 aa11.7□□□□□ -0.54
PSMA4-220ENST00000560737 ZBTB47Q9UFB7 747 aaPredicted RBP11.7□□□□□ -0.54
PSMA4-220ENST00000560737 PITPNM1O00562 1244 aa11.67□□□□□ -0.54
PSMA4-220ENST00000560737 CREBZFQ9NS37 354 aa11.56□□□□□ -0.56
PSMA4-220ENST00000560737 PKD2Q13563 968 aa11.54□□□□□ -0.56
PSMA4-220ENST00000560737 HAX1O00165 279 aa11.52□□□□□ -0.57
PSMA4-220ENST00000560737 CIZ1Q9ULV3 898 aaPredicted RBP11.51□□□□□ -0.57
PSMA4-220ENST00000560737 DCAF8L2P0C7V8 631 aa11.5□□□□□ -0.57
PSMA4-220ENST00000560737 LHX8Q68G74 356 aa11.5□□□□□ -0.57
PSMA4-220ENST00000560737 ECM2O94769 699 aaPredicted RBP11.48□□□□□ -0.57
PSMA4-220ENST00000560737 MNX1P50219 401 aaPredicted RBP11.44□□□□□ -0.58
PSMA4-220ENST00000560737 CHADLQ6NUI6 762 aa11.44□□□□□ -0.58
PSMA4-220ENST00000560737 NPM1P06748 294 aaKnown RBP eCLIP11.43□□□□□ -0.58
PSMA4-220ENST00000560737 NUBP1P53384 320 aa11.42□□□□□ -0.58
PSMA4-220ENST00000560737 GSE1Q14687 1217 aa11.42□□□□□ -0.58
PSMA4-220ENST00000560737 FAM212AQ96EL1 285 aa11.41□□□□□ -0.58
PSMA4-220ENST00000560737 PRKAR2AP13861 404 aaKnown RBP11.4□□□□□ -0.58
PSMA4-220ENST00000560737 DCAF8Q5TAQ9 597 aa11.39□□□□□ -0.59
PSMA4-220ENST00000560737 TRIM41Q8WV44 630 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms