RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 DCAF8L2P0C7V8 631 aa21.49■■□□□ 1.03
SYNM-203ENST00000560674 SUPT5HO00267 1087 aaKnown RBP20.62■□□□□ 0.89
SYNM-203ENST00000560674 NISCHQ9Y2I1 1504 aa20.45■□□□□ 0.86
SYNM-203ENST00000560674 PELP1Q8IZL8 1130 aaKnown RBP20.2■□□□□ 0.82
SYNM-203ENST00000560674 SHROOM4Q9ULL8 1493 aa20.12■□□□□ 0.81
SYNM-203ENST00000560674 EHMT2Q96KQ7 1210 aa20.02■□□□□ 0.8
SYNM-203ENST00000560674 APLP2Q06481 763 aa19.77■□□□□ 0.76
SYNM-203ENST00000560674 PCGF6Q9BYE7 350 aa19.52■□□□□ 0.72
SYNM-203ENST00000560674 FAM9AQ8IZU1 332 aaPredicted RBP19.48■□□□□ 0.71
SYNM-203ENST00000560674 CENPBP07199 599 aaPredicted RBP19.42■□□□□ 0.7
SYNM-203ENST00000560674 TTBK1Q5TCY1 1321 aaPredicted RBP19.41■□□□□ 0.7
SYNM-203ENST00000560674 ERICH6Q7L0X2 663 aa19.37■□□□□ 0.69
SYNM-203ENST00000560674 ZEB1P37275 1124 aaPredicted RBP19.34■□□□□ 0.69
SYNM-203ENST00000560674 CCER1Q8TC90 406 aaPredicted RBP19.29■□□□□ 0.68
SYNM-203ENST00000560674 RANGAP1P46060 587 aaPredicted RBP19.09■□□□□ 0.65
SYNM-203ENST00000560674 TRIM41Q8WV44 630 aa19.09■□□□□ 0.65
SYNM-203ENST00000560674 MYT1Q01538 1121 aa19■□□□□ 0.63
SYNM-203ENST00000560674 NEFLP07196 543 aa18.99■□□□□ 0.63
SYNM-203ENST00000560674 ATP1B4Q9UN42 357 aaPredicted RBP18.95■□□□□ 0.62
SYNM-203ENST00000560674 YTHDC1Q96MU7 727 aaKnown RBP18.91■□□□□ 0.62
SYNM-203ENST00000560674 UBTFP17480 764 aaKnown RBP18.9■□□□□ 0.62
SYNM-203ENST00000560674 TRIM26Q12899 539 aaPredicted RBP18.66■□□□□ 0.58
SYNM-203ENST00000560674 PPARGC1BQ86YN6 1023 aaKnown RBP18.63■□□□□ 0.57
SYNM-203ENST00000560674 HRCP23327 699 aa18.55■□□□□ 0.56
SYNM-203ENST00000560674 DAXXQ9UER7 740 aaPredicted RBP18.47■□□□□ 0.55
SYNM-203ENST00000560674 ITGAEP38570 1179 aa18.36■□□□□ 0.53
SYNM-203ENST00000560674 POLR3GLQ9BT43 218 aa18.33■□□□□ 0.53
SYNM-203ENST00000560674 LOC105371045A0A1W2PR82 267 aa18.26■□□□□ 0.51
SYNM-203ENST00000560674 HNRNPUL2Q1KMD3 747 aaKnown RBP18.26■□□□□ 0.51
SYNM-203ENST00000560674 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.21■□□□□ 0.51
SYNM-203ENST00000560674 CHIC1Q5VXU3 224 aa18.2■□□□□ 0.5
SYNM-203ENST00000560674 MYT1LQ9UL68 1186 aa18.18■□□□□ 0.5
SYNM-203ENST00000560674 CNGB1Q14028 1251 aaPredicted RBP18.14■□□□□ 0.49
SYNM-203ENST00000560674 DIEXFQ68CQ4 756 aaKnown RBP18.12■□□□□ 0.49
SYNM-203ENST00000560674 RTL5Q5HYW3 569 aaPredicted RBP18.11■□□□□ 0.49
SYNM-203ENST00000560674 ZNF316A6NFI3 1004 aaPredicted RBP18.05■□□□□ 0.48
SYNM-203ENST00000560674 CLSPNQ9HAW4 1339 aa17.99■□□□□ 0.47
SYNM-203ENST00000560674 SLC4A1APQ9BWU0 796 aaKnown RBP17.94■□□□□ 0.46
SYNM-203ENST00000560674 FAM50AQ14320 339 aaKnown RBP17.87■□□□□ 0.45
SYNM-203ENST00000560674 GTF3C3Q9Y5Q9 886 aa17.83■□□□□ 0.44
SYNM-203ENST00000560674 BCANQ96GW7 911 aa17.81■□□□□ 0.44
SYNM-203ENST00000560674 TRIM52Q96A61 297 aa17.8■□□□□ 0.44
SYNM-203ENST00000560674 NEUROD1Q13562 356 aa17.78■□□□□ 0.44
SYNM-203ENST00000560674 ANP32CO43423 234 aa17.75■□□□□ 0.43
SYNM-203ENST00000560674 CDK11AQ9UQ88 783 aaPredicted RBP17.75■□□□□ 0.43
SYNM-203ENST00000560674 ZNF326Q5BKZ1 582 aaKnown RBP17.61■□□□□ 0.41
SYNM-203ENST00000560674 ZBTB47Q9UFB7 747 aaPredicted RBP17.6■□□□□ 0.41
SYNM-203ENST00000560674 ACIN1Q9UKV3 1341 aaKnown RBP17.55■□□□□ 0.4
SYNM-203ENST00000560674 CANXP27824 592 aaKnown RBP17.51■□□□□ 0.39
SYNM-203ENST00000560674 ANP32AP39687 249 aaKnown RBP17.48■□□□□ 0.39
SYNM-203ENST00000560674 PABPN1Q86U42 306 aaKnown RBP eCLIP17.39■□□□□ 0.38
SYNM-203ENST00000560674 NEFMP07197 916 aa17.38■□□□□ 0.37
SYNM-203ENST00000560674 BCL11AQ9H165 835 aa17.38■□□□□ 0.37
SYNM-203ENST00000560674 NPM2Q86SE8 214 aaKnown RBP17.34■□□□□ 0.37
SYNM-203ENST00000560674 SLC24A1O60721 1099 aa17.33■□□□□ 0.37
SYNM-203ENST00000560674 CSRNP3Q8WYN3 585 aa17.29■□□□□ 0.36
SYNM-203ENST00000560674 ABCC9O60706 1549 aa17.29■□□□□ 0.36
SYNM-203ENST00000560674 FKBP8Q14318 412 aa17.29■□□□□ 0.36
SYNM-203ENST00000560674 FBLN2P98095 1184 aa17.28■□□□□ 0.36
SYNM-203ENST00000560674 P3H3Q8IVL6 736 aa17.27■□□□□ 0.36
SYNM-203ENST00000560674 CCDC180Q9P1Z9 1646 aa17.26■□□□□ 0.35
SYNM-203ENST00000560674 ANP32BQ92688 251 aaKnown RBP17.22■□□□□ 0.35
SYNM-203ENST00000560674 ARID3CA6NKF2 412 aa17.21■□□□□ 0.35
SYNM-203ENST00000560674 TONSLQ96HA7 1378 aa17.19■□□□□ 0.34
SYNM-203ENST00000560674 EIF5BO60841 1220 aaKnown RBP17.19■□□□□ 0.34
SYNM-203ENST00000560674 HNRNPUQ00839 825 aaKnown RBP eCLIP17.18■□□□□ 0.34
SYNM-203ENST00000560674 ZNF777Q9ULD5 760 aaPredicted RBP17.18■□□□□ 0.34
SYNM-203ENST00000560674 ZCCHC6Q5VYS8 1495 aaKnown RBP17.17■□□□□ 0.34
SYNM-203ENST00000560674 HSP90AA1P07900 732 aaKnown RBP17.16■□□□□ 0.34
SYNM-203ENST00000560674 UPF2Q9HAU5 1272 aaKnown RBP17.15■□□□□ 0.34
SYNM-203ENST00000560674 FAM9BQ8IZU0 186 aa17.12■□□□□ 0.33
SYNM-203ENST00000560674 DDX10Q13206 875 aaKnown RBP17.11■□□□□ 0.33
SYNM-203ENST00000560674 DCAF1Q9Y4B6 1507 aa17.1■□□□□ 0.33
SYNM-203ENST00000560674 CCDC136Q96JN2 1154 aa17.05■□□□□ 0.32
SYNM-203ENST00000560674 GLIPR1L2Q4G1C9 344 aa17.02■□□□□ 0.32
SYNM-203ENST00000560674 SALL2Q9Y467 1007 aaPredicted RBP17.01■□□□□ 0.31
SYNM-203ENST00000560674 NBR1Q14596 966 aa17.01■□□□□ 0.31
SYNM-203ENST00000560674 GOLGA6L2Q8N9W4 650 aaPredicted RBP17■□□□□ 0.31
SYNM-203ENST00000560674 TMC1Q8TDI8 760 aa17■□□□□ 0.31
SYNM-203ENST00000560674 CHGAP10645 457 aaKnown RBP16.97■□□□□ 0.31
SYNM-203ENST00000560674 MRS2Q9HD23 443 aa16.93■□□□□ 0.3
SYNM-203ENST00000560674 ESF1Q9H501 851 aaKnown RBP16.92■□□□□ 0.3
SYNM-203ENST00000560674 WDR43Q15061 677 aaKnown RBP eCLIP16.92■□□□□ 0.3
SYNM-203ENST00000560674 STAG3Q9UJ98 1225 aa16.92■□□□□ 0.3
SYNM-203ENST00000560674 SCAF1Q9H7N4 1312 aaKnown RBP16.91■□□□□ 0.3
SYNM-203ENST00000560674 MIER1Q8N108 512 aa16.89■□□□□ 0.29
SYNM-203ENST00000560674 CHIC2Q9UKJ5 165 aa16.88■□□□□ 0.29
SYNM-203ENST00000560674 ARXQ96QS3 562 aa16.88■□□□□ 0.29
SYNM-203ENST00000560674 IRX6P78412 446 aaPredicted RBP16.85■□□□□ 0.29
SYNM-203ENST00000560674 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.82■□□□□ 0.28
SYNM-203ENST00000560674 SCRIBQ14160 1630 aa16.8■□□□□ 0.28
SYNM-203ENST00000560674 KDM2AQ9Y2K7 1162 aa16.8■□□□□ 0.28
SYNM-203ENST00000560674 DDRGK1Q96HY6 314 aa16.78■□□□□ 0.28
SYNM-203ENST00000560674 MYH16Q9H6N6 1097 aa16.77■□□□□ 0.28
SYNM-203ENST00000560674 EIF4G2P78344 907 aaKnown RBP eCLIP16.76■□□□□ 0.27
SYNM-203ENST00000560674 MTUS2Q5JR59 1369 aa16.76■□□□□ 0.27
SYNM-203ENST00000560674 TSPY4P0CV99 314 aa16.76■□□□□ 0.27
SYNM-203ENST00000560674 TSPY10P0CW01 314 aa16.76■□□□□ 0.27
SYNM-203ENST00000560674 HIRIP3Q9BW71 556 aaPredicted RBP16.76■□□□□ 0.27
SYNM-203ENST00000560674 BECN1Q14457 450 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms