RNA–Protein interactions for RNA: ENST00000558963.2

AC087516.2-201, humanhuman

TSL 3 BASIC

Gene AC087516.2, Length 3,042 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087516.2-201ENST00000558963 NISCHQ9Y2I1 1504 aa13.83□□□□□ -0.2
AC087516.2-201ENST00000558963 CCDC180Q9P1Z9 1646 aa12.06□□□□□ -0.48
AC087516.2-201ENST00000558963 ZCCHC6Q5VYS8 1495 aaKnown RBP11.76□□□□□ -0.53
AC087516.2-201ENST00000558963 DCAF1Q9Y4B6 1507 aa11.64□□□□□ -0.55
AC087516.2-201ENST00000558963 MYO15BQ96JP2 1530 aa11.37□□□□□ -0.59
AC087516.2-201ENST00000558963 ABCC9O60706 1549 aa11.29□□□□□ -0.6
AC087516.2-201ENST00000558963 RB1CC1Q8TDY2 1594 aa11.27□□□□□ -0.61
AC087516.2-201ENST00000558963 SHROOM4Q9ULL8 1493 aa11.27□□□□□ -0.61
AC087516.2-201ENST00000558963 NACADO15069 1562 aa11.26□□□□□ -0.61
AC087516.2-201ENST00000558963 UNC13AQ9UPW8 1703 aa11□□□□□ -0.65
AC087516.2-201ENST00000558963 SUPT5HO00267 1087 aaKnown RBP10.92□□□□□ -0.66
AC087516.2-201ENST00000558963 AEBP2Q6ZN18 517 aaPredicted RBP10.91□□□□□ -0.66
AC087516.2-201ENST00000558963 CHIC1Q5VXU3 224 aa10.89□□□□□ -0.67
AC087516.2-201ENST00000558963 SCRIBQ14160 1630 aa10.84□□□□□ -0.67
AC087516.2-201ENST00000558963 BICRAQ9NZM4 1560 aa10.84□□□□□ -0.67
AC087516.2-201ENST00000558963 RSF1Q96T23 1441 aaPredicted RBP10.83□□□□□ -0.68
AC087516.2-201ENST00000558963 BAZ1AQ9NRL2 1556 aaPredicted RBP10.72□□□□□ -0.69
AC087516.2-201ENST00000558963 DCAF8L2P0C7V8 631 aa10.71□□□□□ -0.69
AC087516.2-201ENST00000558963 EIF4G1Q04637 1599 aaKnown RBP10.7□□□□□ -0.7
AC087516.2-201ENST00000558963 HRCP23327 699 aa10.64□□□□□ -0.71
AC087516.2-201ENST00000558963 MROH2BQ7Z745 1585 aa10.63□□□□□ -0.71
AC087516.2-201ENST00000558963 TOP2AP11388 1531 aaKnown RBP10.58□□□□□ -0.72
AC087516.2-201ENST00000558963 WIZO95785 1651 aa10.57□□□□□ -0.72
AC087516.2-201ENST00000558963 CECR2Q9BXF3 1484 aa10.57□□□□□ -0.72
AC087516.2-201ENST00000558963 SMARCA4P51532 1647 aa10.57□□□□□ -0.72
AC087516.2-201ENST00000558963 PEG3Q9GZU2 1588 aa10.56□□□□□ -0.72
AC087516.2-201ENST00000558963 DNAJC5BQ9UF47 199 aa10.54□□□□□ -0.72
AC087516.2-201ENST00000558963 CC2D2AQ9P2K1 1620 aa10.54□□□□□ -0.72
AC087516.2-201ENST00000558963 SMARCA2P51531 1590 aa10.46□□□□□ -0.73
AC087516.2-201ENST00000558963 CUX2O14529 1486 aa10.41□□□□□ -0.74
AC087516.2-201ENST00000558963 TRIM26Q12899 539 aaPredicted RBP10.38□□□□□ -0.75
AC087516.2-201ENST00000558963 EEA1Q15075 1411 aa10.37□□□□□ -0.75
AC087516.2-201ENST00000558963 PCGF6Q9BYE7 350 aa10.37□□□□□ -0.75
AC087516.2-201ENST00000558963 TRIM41Q8WV44 630 aa10.36□□□□□ -0.75
AC087516.2-201ENST00000558963 CCDC88BA6NC98 1476 aa10.35□□□□□ -0.75
AC087516.2-201ENST00000558963 WRNQ14191 1432 aaPredicted RBP eCLIP10.33□□□□□ -0.76
AC087516.2-201ENST00000558963 HMGXB3Q12766 1538 aa10.32□□□□□ -0.76
AC087516.2-201ENST00000558963 LOC105371045A0A1W2PR82 267 aa10.31□□□□□ -0.76
AC087516.2-201ENST00000558963 ZEB1P37275 1124 aaPredicted RBP10.27□□□□□ -0.77
AC087516.2-201ENST00000558963 KIF21BO75037 1637 aa10.26□□□□□ -0.77
AC087516.2-201ENST00000558963 NCAPD3P42695 1498 aa10.25□□□□□ -0.77
AC087516.2-201ENST00000558963 PPARGC1BQ86YN6 1023 aaKnown RBP10.22□□□□□ -0.77
AC087516.2-201ENST00000558963 ATAD2BQ9ULI0 1458 aa10.22□□□□□ -0.77
AC087516.2-201ENST00000558963 ABCC8Q09428 1581 aa10.21□□□□□ -0.77
AC087516.2-201ENST00000558963 TNIKQ9UKE5 1360 aa10.2□□□□□ -0.78
AC087516.2-201ENST00000558963 BIVM-ERCC5R4GMW8 1640 aa10.2□□□□□ -0.78
AC087516.2-201ENST00000558963 BAZ1BQ9UIG0 1483 aaKnown RBP10.18□□□□□ -0.78
AC087516.2-201ENST00000558963 PRDM2Q13029 1718 aa10.17□□□□□ -0.78
AC087516.2-201ENST00000558963 PABPN1Q86U42 306 aaKnown RBP eCLIP10.17□□□□□ -0.78
AC087516.2-201ENST00000558963 TOP2BQ02880 1626 aa10.16□□□□□ -0.78
AC087516.2-201ENST00000558963 GOLGA3Q08378 1498 aa10.15□□□□□ -0.78
AC087516.2-201ENST00000558963 SYNJ1O43426 1573 aa10.15□□□□□ -0.79
AC087516.2-201ENST00000558963 LAMC3Q9Y6N6 1575 aa10.14□□□□□ -0.79
AC087516.2-201ENST00000558963 DNAJC5Q9H3Z4 198 aa10.13□□□□□ -0.79
AC087516.2-201ENST00000558963 CEP164Q9UPV0 1460 aa10.12□□□□□ -0.79
AC087516.2-201ENST00000558963 CEP162Q5TB80 1403 aa10.12□□□□□ -0.79
AC087516.2-201ENST00000558963 ERICH3Q5RHP9 1530 aa10.1□□□□□ -0.79
AC087516.2-201ENST00000558963 THOC2Q8NI27 1593 aaKnown RBP10.1□□□□□ -0.79
AC087516.2-201ENST00000558963 SOGA1O94964 1423 aa10.08□□□□□ -0.8
AC087516.2-201ENST00000558963 PELP1Q8IZL8 1130 aaKnown RBP10.04□□□□□ -0.8
AC087516.2-201ENST00000558963 CSRNP3Q8WYN3 585 aa10.03□□□□□ -0.8
AC087516.2-201ENST00000558963 RUSC2Q8N2Y8 1516 aa10.01□□□□□ -0.81
AC087516.2-201ENST00000558963 CFTRP13569 1480 aa9.99□□□□□ -0.81
AC087516.2-201ENST00000558963 FAM9AQ8IZU1 332 aaPredicted RBP9.99□□□□□ -0.81
AC087516.2-201ENST00000558963 PRXQ9BXM0 1461 aa9.99□□□□□ -0.81
AC087516.2-201ENST00000558963 VPS8Q8N3P4 1428 aa9.97□□□□□ -0.81
AC087516.2-201ENST00000558963 WDR62O43379 1518 aa9.95□□□□□ -0.82
AC087516.2-201ENST00000558963 CUX1P39880 1505 aa9.94□□□□□ -0.82
AC087516.2-201ENST00000558963 CLIP1P30622 1438 aa9.92□□□□□ -0.82
AC087516.2-201ENST00000558963 RAPGEF2Q9Y4G8 1499 aa9.91□□□□□ -0.82
AC087516.2-201ENST00000558963 MAP3K1Q13233 1512 aa9.91□□□□□ -0.82
AC087516.2-201ENST00000558963 WDR97A6NE52 1622 aa9.89□□□□□ -0.83
AC087516.2-201ENST00000558963 KIF21AQ7Z4S6 1674 aa9.88□□□□□ -0.83
AC087516.2-201ENST00000558963 ERCC6Q03468 1493 aa9.87□□□□□ -0.83
AC087516.2-201ENST00000558963 PDS5BQ9NTI5 1447 aa9.87□□□□□ -0.83
AC087516.2-201ENST00000558963 KIF27Q86VH2 1401 aa9.86□□□□□ -0.83
AC087516.2-201ENST00000558963 SCAF1Q9H7N4 1312 aaKnown RBP9.86□□□□□ -0.83
AC087516.2-201ENST00000558963 ARAP1Q96P48 1450 aa9.86□□□□□ -0.83
AC087516.2-201ENST00000558963 MRC2Q9UBG0 1479 aa9.84□□□□□ -0.83
AC087516.2-201ENST00000558963 CLSPNQ9HAW4 1339 aa9.83□□□□□ -0.84
AC087516.2-201ENST00000558963 RRBP1Q9P2E9 1410 aaKnown RBP9.81□□□□□ -0.84
AC087516.2-201ENST00000558963 CFAP43Q8NDM7 1665 aa9.79□□□□□ -0.84
AC087516.2-201ENST00000558963 UBTFP17480 764 aaKnown RBP9.79□□□□□ -0.84
AC087516.2-201ENST00000558963 CUL7Q14999 1698 aa9.79□□□□□ -0.84
AC087516.2-201ENST00000558963 CADPSQ9ULU8 1353 aa9.78□□□□□ -0.84
AC087516.2-201ENST00000558963 DNMBPQ6XZF7 1577 aa9.78□□□□□ -0.84
AC087516.2-201ENST00000558963 ACIN1Q9UKV3 1341 aaKnown RBP9.75□□□□□ -0.85
AC087516.2-201ENST00000558963 EFCAB5A4FU69 1503 aa9.75□□□□□ -0.85
AC087516.2-201ENST00000558963 ARHGAP35Q9NRY4 1499 aa9.75□□□□□ -0.85
AC087516.2-201ENST00000558963 CCER1Q8TC90 406 aaPredicted RBP9.74□□□□□ -0.85
AC087516.2-201ENST00000558963 ABCA10Q8WWZ4 1543 aa9.74□□□□□ -0.85
AC087516.2-201ENST00000558963 AQRO60306 1485 aaKnown RBP eCLIP9.74□□□□□ -0.85
AC087516.2-201ENST00000558963 TIAM1Q13009 1591 aa9.73□□□□□ -0.85
AC087516.2-201ENST00000558963 CTTNBP2Q8WZ74 1663 aa9.73□□□□□ -0.85
AC087516.2-201ENST00000558963 FGD5Q6ZNL6 1462 aa9.71□□□□□ -0.85
AC087516.2-201ENST00000558963 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.7□□□□□ -0.86
AC087516.2-201ENST00000558963 IGF1RP08069 1367 aa9.7□□□□□ -0.86
AC087516.2-201ENST00000558963 ABCA5Q8WWZ7 1642 aa9.68□□□□□ -0.86
AC087516.2-201ENST00000558963 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.68□□□□□ -0.86
AC087516.2-201ENST00000558963 FANCD2Q9BXW9 1451 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms