RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 AEBP2Q6ZN18 517 aaPredicted RBP13.91□□□□□ -0.18
HMGB1P14-201ENST00000557424 CHIC1Q5VXU3 224 aa13.32□□□□□ -0.28
HMGB1P14-201ENST00000557424 SENP3Q9H4L4 574 aaPredicted RBP11.92□□□□□ -0.5
HMGB1P14-201ENST00000557424 PHF23Q9BUL5 403 aaPredicted RBP11.65□□□□□ -0.54
HMGB1P14-201ENST00000557424 POTEDQ86YR6 584 aa11.62□□□□□ -0.55
HMGB1P14-201ENST00000557424 FOXD1Q16676 465 aa11.21□□□□□ -0.61
HMGB1P14-201ENST00000557424 PLPPR3Q6T4P5 718 aa11□□□□□ -0.65
HMGB1P14-201ENST00000557424 MSH5O43196 834 aa10.72□□□□□ -0.69
HMGB1P14-201ENST00000557424 PIAS4Q8N2W9 510 aaPredicted RBP10.3□□□□□ -0.76
HMGB1P14-201ENST00000557424 ADRA2BP18089 450 aa10.17□□□□□ -0.78
HMGB1P14-201ENST00000557424 PPP6R1Q9UPN7 881 aa10.1□□□□□ -0.79
HMGB1P14-201ENST00000557424 SCAF1Q9H7N4 1312 aaKnown RBP9.67□□□□□ -0.86
HMGB1P14-201ENST00000557424 CACNB1Q02641 598 aaPredicted RBP9.58□□□□□ -0.88
HMGB1P14-201ENST00000557424 NCBP3Q53F19 620 aaKnown RBP9.58□□□□□ -0.88
HMGB1P14-201ENST00000557424 PPP4R3CPQ6ZMV5 832 aa9.58□□□□□ -0.88
HMGB1P14-201ENST00000557424 KCNA4P22459 653 aa9.39□□□□□ -0.91
HMGB1P14-201ENST00000557424 CNKSR2Q8WXI2 1034 aa9.38□□□□□ -0.91
HMGB1P14-201ENST00000557424 DMRT2Q9Y5R5 561 aa9.36□□□□□ -0.91
HMGB1P14-201ENST00000557424 MAPK8IP2Q13387 824 aaPredicted RBP9.27□□□□□ -0.93
HMGB1P14-201ENST00000557424 NPM3O75607 178 aaKnown RBP9.19□□□□□ -0.94
HMGB1P14-201ENST00000557424 RNF216Q9NWF9 866 aaPredicted RBP9.17□□□□□ -0.94
HMGB1P14-201ENST00000557424 SLC4A1APQ9BWU0 796 aaKnown RBP9.11□□□□□ -0.95
HMGB1P14-201ENST00000557424 RNF39Q9H2S5 420 aa9.11□□□□□ -0.95
HMGB1P14-201ENST00000557424 DNAJC5BQ9UF47 199 aa9.06□□□□□ -0.96
HMGB1P14-201ENST00000557424 HOXD11P31277 338 aaPredicted RBP9.04□□□□□ -0.96
HMGB1P14-201ENST00000557424 DCAF8L1A6NGE4 600 aa8.96□□□□□ -0.98
HMGB1P14-201ENST00000557424 POTEHQ6S545 545 aa8.95□□□□□ -0.98
HMGB1P14-201ENST00000557424 C1QBPQ07021 282 aaKnown RBP8.9□□□□□ -0.98
HMGB1P14-201ENST00000557424 EHMT2Q96KQ7 1210 aa8.89□□□□□ -0.99
HMGB1P14-201ENST00000557424 FOXD4L1Q9NU39 408 aa8.79□□□□□ -1
HMGB1P14-201ENST00000557424 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P14-201ENST00000557424 HNRNPUL2Q1KMD3 747 aaKnown RBP8.7□□□□□ -1.02
HMGB1P14-201ENST00000557424 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.7□□□□□ -1.02
HMGB1P14-201ENST00000557424 CSRNP3Q8WYN3 585 aa8.67□□□□□ -1.02
HMGB1P14-201ENST00000557424 MYCNP04198 464 aaPredicted RBP8.65□□□□□ -1.02
HMGB1P14-201ENST00000557424 APLP2Q06481 763 aa8.65□□□□□ -1.02
HMGB1P14-201ENST00000557424 SAMD1Q6SPF0 538 aaPredicted RBP8.59□□□□□ -1.03
HMGB1P14-201ENST00000557424 SLC4A2P04920 1241 aa8.56□□□□□ -1.04
HMGB1P14-201ENST00000557424 ATXN8OSP0DMR3 200 aa8.55□□□□□ -1.04
HMGB1P14-201ENST00000557424 ZBTB22O15209 634 aa8.54□□□□□ -1.04
HMGB1P14-201ENST00000557424 U3KPZ7 1027 aaPredicted RBP8.43□□□□□ -1.06
HMGB1P14-201ENST00000557424 ZNF219Q9P2Y4 722 aaPredicted RBP8.34□□□□□ -1.07
HMGB1P14-201ENST00000557424 DSG3P32926 999 aa8.29□□□□□ -1.08
HMGB1P14-201ENST00000557424 CAPN15O75808 1086 aa8.23□□□□□ -1.09
HMGB1P14-201ENST00000557424 ZBTB12Q9Y330 459 aaPredicted RBP8.2□□□□□ -1.1
HMGB1P14-201ENST00000557424 SPINK5Q9NQ38 1064 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P14-201ENST00000557424 TRHP20396 242 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P14-201ENST00000557424 FBLN2P98095 1184 aa8.13□□□□□ -1.11
HMGB1P14-201ENST00000557424 SP7Q8TDD2 431 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P14-201ENST00000557424 ATF5Q9Y2D1 282 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P14-201ENST00000557424 POLA2Q14181 598 aa8.04□□□□□ -1.12
HMGB1P14-201ENST00000557424 CHRDL2Q6WN34 429 aa8.02□□□□□ -1.13
HMGB1P14-201ENST00000557424 ABCB7O75027 752 aa7.96□□□□□ -1.14
HMGB1P14-201ENST00000557424 FKBP8Q14318 412 aa7.93□□□□□ -1.14
HMGB1P14-201ENST00000557424 RBM42Q9BTD8 480 aaKnown RBP7.91□□□□□ -1.14
HMGB1P14-201ENST00000557424 SPDYE4A6NLX3 237 aa7.87□□□□□ -1.15
HMGB1P14-201ENST00000557424 SPDYE2BA6NHP3 402 aa7.86□□□□□ -1.15
HMGB1P14-201ENST00000557424 SPDYE6P0CI01 402 aa7.86□□□□□ -1.15
HMGB1P14-201ENST00000557424 SPDYE2Q495Y8 402 aa7.86□□□□□ -1.15
HMGB1P14-201ENST00000557424 FBXO3Q9UK99 471 aa7.85□□□□□ -1.15
HMGB1P14-201ENST00000557424 MKRN4PQ13434 485 aaPredicted RBP7.81□□□□□ -1.16
HMGB1P14-201ENST00000557424 ZNF692Q9BU19 519 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P14-201ENST00000557424 OSCARQ8IYS5 282 aa7.76□□□□□ -1.17
HMGB1P14-201ENST00000557424 STAG3Q9UJ98 1225 aa7.73□□□□□ -1.17
HMGB1P14-201ENST00000557424 SSUH2Q9Y2M2 353 aa7.7□□□□□ -1.18
HMGB1P14-201ENST00000557424 PROM2Q8N271 834 aa7.69□□□□□ -1.18
HMGB1P14-201ENST00000557424 PIP4P2Q8N4L2 257 aa7.69□□□□□ -1.18
HMGB1P14-201ENST00000557424 HAX1O00165 279 aa7.68□□□□□ -1.18
HMGB1P14-201ENST00000557424 PLEKHG5O94827 1062 aa7.68□□□□□ -1.18
HMGB1P14-201ENST00000557424 AKT1S1Q96B36 256 aa7.67□□□□□ -1.18
HMGB1P14-201ENST00000557424 PABPN1Q86U42 306 aaKnown RBP eCLIP7.64□□□□□ -1.19
HMGB1P14-201ENST00000557424 SPDYE1Q8NFV5 336 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P14-201ENST00000557424 PLSCR2Q9NRY7 297 aa7.62□□□□□ -1.19
HMGB1P14-201ENST00000557424 ZBTB47Q9UFB7 747 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P14-201ENST00000557424 EVX2Q03828 476 aa7.59□□□□□ -1.19
HMGB1P14-201ENST00000557424 AMER1Q5JTC6 1135 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P14-201ENST00000557424 VASPP50552 380 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P14-201ENST00000557424 LHX8Q68G74 356 aa7.55□□□□□ -1.2
HMGB1P14-201ENST00000557424 FXR2P51116 673 aaKnown RBP eCLIP7.54□□□□□ -1.2
HMGB1P14-201ENST00000557424 PLCD3Q8N3E9 789 aa7.53□□□□□ -1.2
HMGB1P14-201ENST00000557424 REM2Q8IYK8 340 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P14-201ENST00000557424 SLC24A1O60721 1099 aa7.51□□□□□ -1.21
HMGB1P14-201ENST00000557424 PITPNM1O00562 1244 aa7.49□□□□□ -1.21
HMGB1P14-201ENST00000557424 PRR29P0C7W0 189 aa7.47□□□□□ -1.21
HMGB1P14-201ENST00000557424 MIER1Q8N108 512 aa7.47□□□□□ -1.21
HMGB1P14-201ENST00000557424 KLHL34Q8N239 644 aa7.47□□□□□ -1.21
HMGB1P14-201ENST00000557424 CLEC11AQ9Y240 323 aa7.47□□□□□ -1.21
HMGB1P14-201ENST00000557424 SPOCK2Q92563 424 aa7.42□□□□□ -1.22
HMGB1P14-201ENST00000557424 NPM1P06748 294 aaKnown RBP eCLIP7.39□□□□□ -1.23
HMGB1P14-201ENST00000557424 TRIM41Q8WV44 630 aa7.37□□□□□ -1.23
HMGB1P14-201ENST00000557424 RTN4Q9NQC3 1192 aaKnown RBP7.36□□□□□ -1.23
HMGB1P14-201ENST00000557424 GABBR2O75899 941 aa7.35□□□□□ -1.23
HMGB1P14-201ENST00000557424 IFNLR1Q8IU57 520 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P14-201ENST00000557424 GSE1Q14687 1217 aa7.33□□□□□ -1.24
HMGB1P14-201ENST00000557424 C19orf67A6NJJ6 358 aa7.32□□□□□ -1.24
HMGB1P14-201ENST00000557424 FAM212AQ96EL1 285 aa7.31□□□□□ -1.24
HMGB1P14-201ENST00000557424 TAOK2Q9UL54 1235 aa7.31□□□□□ -1.24
HMGB1P14-201ENST00000557424 PAK3O75914 559 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P14-201ENST00000557424 CREBZFQ9NS37 354 aa7.26□□□□□ -1.25
HMGB1P14-201ENST00000557424 PRKAR2AP13861 404 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms