RNA–Protein interactions for RNA: ENST00000555589.5

RIN3-206, Transcript of Ras and Rab interactor 3, humanhuman

TSL 1 (best)

Gene RIN3, Length 2,814 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIN3-206ENST00000555589 NISCHQ9Y2I1 1504 aa32.46■■■□□ 2.79
RIN3-206ENST00000555589 SHROOM4Q9ULL8 1493 aa28.19■■■□□ 2.1
RIN3-206ENST00000555589 SUPT5HO00267 1087 aaKnown RBP27.67■■■□□ 2.02
RIN3-206ENST00000555589 DCAF8L2P0C7V8 631 aa27.51■■□□□ 1.99
RIN3-206ENST00000555589 ZCCHC6Q5VYS8 1495 aaKnown RBP27.41■■□□□ 1.98
RIN3-206ENST00000555589 CCDC180Q9P1Z9 1646 aa27.33■■□□□ 1.97
RIN3-206ENST00000555589 CHIC1Q5VXU3 224 aa26.7■■□□□ 1.86
RIN3-206ENST00000555589 PELP1Q8IZL8 1130 aaKnown RBP26.63■■□□□ 1.85
RIN3-206ENST00000555589 MYO15BQ96JP2 1530 aa26.6■■□□□ 1.85
RIN3-206ENST00000555589 DCAF1Q9Y4B6 1507 aa26.39■■□□□ 1.82
RIN3-206ENST00000555589 HRCP23327 699 aa26.21■■□□□ 1.79
RIN3-206ENST00000555589 LOC105371045A0A1W2PR82 267 aa26.13■■□□□ 1.77
RIN3-206ENST00000555589 PCGF6Q9BYE7 350 aa26.09■■□□□ 1.77
RIN3-206ENST00000555589 SCRIBQ14160 1630 aa26.01■■□□□ 1.75
RIN3-206ENST00000555589 MYT1Q01538 1121 aa25.85■■□□□ 1.73
RIN3-206ENST00000555589 ABCC9O60706 1549 aa25.84■■□□□ 1.73
RIN3-206ENST00000555589 RSF1Q96T23 1441 aaPredicted RBP25.8■■□□□ 1.72
RIN3-206ENST00000555589 PPARGC1BQ86YN6 1023 aaKnown RBP25.69■■□□□ 1.7
RIN3-206ENST00000555589 FAM9AQ8IZU1 332 aaPredicted RBP25.64■■□□□ 1.7
RIN3-206ENST00000555589 TRIM41Q8WV44 630 aa25.62■■□□□ 1.69
RIN3-206ENST00000555589 EHMT2Q96KQ7 1210 aa25.62■■□□□ 1.69
RIN3-206ENST00000555589 RB1CC1Q8TDY2 1594 aa25.54■■□□□ 1.68
RIN3-206ENST00000555589 CECR2Q9BXF3 1484 aa25.51■■□□□ 1.67
RIN3-206ENST00000555589 NACADO15069 1562 aa25.37■■□□□ 1.65
RIN3-206ENST00000555589 TRIM26Q12899 539 aaPredicted RBP25.37■■□□□ 1.65
RIN3-206ENST00000555589 SCAF1Q9H7N4 1312 aaKnown RBP25.35■■□□□ 1.65
RIN3-206ENST00000555589 MROH2BQ7Z745 1585 aa25.35■■□□□ 1.65
RIN3-206ENST00000555589 WIZO95785 1651 aa25.22■■□□□ 1.63
RIN3-206ENST00000555589 BAZ1AQ9NRL2 1556 aaPredicted RBP24.88■■□□□ 1.57
RIN3-206ENST00000555589 PABPN1Q86U42 306 aaKnown RBP eCLIP24.85■■□□□ 1.57
RIN3-206ENST00000555589 ABCC8Q09428 1581 aa24.76■■□□□ 1.55
RIN3-206ENST00000555589 TTBK1Q5TCY1 1321 aaPredicted RBP24.75■■□□□ 1.55
RIN3-206ENST00000555589 CCDC88BA6NC98 1476 aa24.72■■□□□ 1.55
RIN3-206ENST00000555589 SMARCA4P51532 1647 aa24.69■■□□□ 1.54
RIN3-206ENST00000555589 ZEB1P37275 1124 aaPredicted RBP24.68■■□□□ 1.54
RIN3-206ENST00000555589 EIF4G1Q04637 1599 aaKnown RBP24.67■■□□□ 1.54
RIN3-206ENST00000555589 UNC13AQ9UPW8 1703 aa24.66■■□□□ 1.54
RIN3-206ENST00000555589 TOP2AP11388 1531 aaKnown RBP24.66■■□□□ 1.54
RIN3-206ENST00000555589 SMARCA2P51531 1590 aa24.59■■□□□ 1.53
RIN3-206ENST00000555589 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.57■■□□□ 1.52
RIN3-206ENST00000555589 SOGA1O94964 1423 aa24.56■■□□□ 1.52
RIN3-206ENST00000555589 UBTFP17480 764 aaKnown RBP24.47■■□□□ 1.51
RIN3-206ENST00000555589 RUSC2Q8N2Y8 1516 aa24.46■■□□□ 1.51
RIN3-206ENST00000555589 CCER1Q8TC90 406 aaPredicted RBP24.43■■□□□ 1.5
RIN3-206ENST00000555589 ACIN1Q9UKV3 1341 aaKnown RBP24.41■■□□□ 1.5
RIN3-206ENST00000555589 CSRNP3Q8WYN3 585 aa24.4■■□□□ 1.5
RIN3-206ENST00000555589 BICRAQ9NZM4 1560 aa24.39■■□□□ 1.49
RIN3-206ENST00000555589 CEP162Q5TB80 1403 aa24.37■■□□□ 1.49
RIN3-206ENST00000555589 NEUROD1Q13562 356 aa24.32■■□□□ 1.48
RIN3-206ENST00000555589 GTF3C3Q9Y5Q9 886 aa24.29■■□□□ 1.48
RIN3-206ENST00000555589 TNIKQ9UKE5 1360 aa24.25■■□□□ 1.47
RIN3-206ENST00000555589 WRNQ14191 1432 aaPredicted RBP eCLIP24.24■■□□□ 1.47
RIN3-206ENST00000555589 RANGAP1P46060 587 aaPredicted RBP24.24■■□□□ 1.47
RIN3-206ENST00000555589 BCL11AQ9H165 835 aa24.17■■□□□ 1.46
RIN3-206ENST00000555589 EEA1Q15075 1411 aa24.12■■□□□ 1.45
RIN3-206ENST00000555589 ATAD2BQ9ULI0 1458 aa24.12■■□□□ 1.45
RIN3-206ENST00000555589 GOLGA3Q08378 1498 aa24.1■■□□□ 1.45
RIN3-206ENST00000555589 SYNJ1O43426 1573 aa24.09■■□□□ 1.45
RIN3-206ENST00000555589 BAZ1BQ9UIG0 1483 aaKnown RBP24.08■■□□□ 1.45
RIN3-206ENST00000555589 PEG3Q9GZU2 1588 aa24.06■■□□□ 1.44
RIN3-206ENST00000555589 HNRNPUL2Q1KMD3 747 aaKnown RBP24.01■■□□□ 1.43
RIN3-206ENST00000555589 CENPBP07199 599 aaPredicted RBP24■■□□□ 1.43
RIN3-206ENST00000555589 PRKCSHP14314 528 aaPredicted RBP23.94■■□□□ 1.42
RIN3-206ENST00000555589 CEP164Q9UPV0 1460 aa23.94■■□□□ 1.42
RIN3-206ENST00000555589 CLIP1P30622 1438 aa23.92■■□□□ 1.42
RIN3-206ENST00000555589 DIEXFQ68CQ4 756 aaKnown RBP23.92■■□□□ 1.42
RIN3-206ENST00000555589 RAPGEF2Q9Y4G8 1499 aa23.9■■□□□ 1.42
RIN3-206ENST00000555589 APLP2Q06481 763 aa23.85■■□□□ 1.41
RIN3-206ENST00000555589 KIF21BO75037 1637 aa23.8■■□□□ 1.4
RIN3-206ENST00000555589 VPS8Q8N3P4 1428 aa23.74■■□□□ 1.39
RIN3-206ENST00000555589 TOP2BQ02880 1626 aa23.69■■□□□ 1.38
RIN3-206ENST00000555589 ZNF316A6NFI3 1004 aaPredicted RBP23.66■■□□□ 1.38
RIN3-206ENST00000555589 KANK4Q5T7N3 995 aaPredicted RBP23.59■■□□□ 1.37
RIN3-206ENST00000555589 YTHDC1Q96MU7 727 aaKnown RBP23.57■■□□□ 1.36
RIN3-206ENST00000555589 NCAPD3P42695 1498 aa23.56■■□□□ 1.36
RIN3-206ENST00000555589 CUX1P39880 1505 aa23.56■■□□□ 1.36
RIN3-206ENST00000555589 ANP32EQ9BTT0 268 aa23.53■■□□□ 1.36
RIN3-206ENST00000555589 BIVM-ERCC5R4GMW8 1640 aa23.53■■□□□ 1.36
RIN3-206ENST00000555589 PRXQ9BXM0 1461 aa23.52■■□□□ 1.36
RIN3-206ENST00000555589 ARAP1Q96P48 1450 aa23.47■■□□□ 1.35
RIN3-206ENST00000555589 HMGXB3Q12766 1538 aa23.47■■□□□ 1.35
RIN3-206ENST00000555589 KIF27Q86VH2 1401 aa23.46■■□□□ 1.35
RIN3-206ENST00000555589 ITGAEP38570 1179 aa23.45■■□□□ 1.34
RIN3-206ENST00000555589 MIER1Q8N108 512 aa23.45■■□□□ 1.34
RIN3-206ENST00000555589 CFTRP13569 1480 aa23.42■■□□□ 1.34
RIN3-206ENST00000555589 ERICH3Q5RHP9 1530 aa23.4■■□□□ 1.34
RIN3-206ENST00000555589 CUX2O14529 1486 aa23.31■■□□□ 1.32
RIN3-206ENST00000555589 ERICH6Q7L0X2 663 aa23.29■■□□□ 1.32
RIN3-206ENST00000555589 ARHGAP35Q9NRY4 1499 aa23.29■■□□□ 1.32
RIN3-206ENST00000555589 P3H3Q8IVL6 736 aa23.28■■□□□ 1.32
RIN3-206ENST00000555589 DHX57Q6P158 1386 aaKnown RBP23.28■■□□□ 1.32
RIN3-206ENST00000555589 IGF1RP08069 1367 aa23.27■■□□□ 1.32
RIN3-206ENST00000555589 ATP1B4Q9UN42 357 aaPredicted RBP23.25■■□□□ 1.31
RIN3-206ENST00000555589 CADPSQ9ULU8 1353 aa23.23■■□□□ 1.31
RIN3-206ENST00000555589 CARMIL1Q5VZK9 1371 aa23.19■■□□□ 1.3
RIN3-206ENST00000555589 CCNB3Q8WWL7 1395 aa23.17■■□□□ 1.3
RIN3-206ENST00000555589 FGD5Q6ZNL6 1462 aa23.17■■□□□ 1.3
RIN3-206ENST00000555589 RRBP1Q9P2E9 1410 aaKnown RBP23.15■■□□□ 1.3
RIN3-206ENST00000555589 FAM50AQ14320 339 aaKnown RBP23.09■■□□□ 1.29
RIN3-206ENST00000555589 CLSPNQ9HAW4 1339 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms