RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 CHIC1Q5VXU3 224 aa17.91■□□□□ 0.46
PABPN1-204ENST00000554062 AEBP2Q6ZN18 517 aaPredicted RBP17.59■□□□□ 0.41
PABPN1-204ENST00000554062 PHF23Q9BUL5 403 aaPredicted RBP15.66■□□□□ 0.1
PABPN1-204ENST00000554062 SENP3Q9H4L4 574 aaPredicted RBP15.09■□□□□ 0.01
PABPN1-204ENST00000554062 PLPPR3Q6T4P5 718 aa14.89□□□□□ -0.03
PABPN1-204ENST00000554062 FOXD1Q16676 465 aa13.87□□□□□ -0.19
PABPN1-204ENST00000554062 ADRA2BP18089 450 aa13.66□□□□□ -0.22
PABPN1-204ENST00000554062 PPP6R1Q9UPN7 881 aa13.59□□□□□ -0.23
PABPN1-204ENST00000554062 KCNA4P22459 653 aa13.37□□□□□ -0.27
PABPN1-204ENST00000554062 PIAS4Q8N2W9 510 aaPredicted RBP13.2□□□□□ -0.3
PABPN1-204ENST00000554062 EHMT2Q96KQ7 1210 aa13.15□□□□□ -0.3
PABPN1-204ENST00000554062 NCBP3Q53F19 620 aaKnown RBP13.09□□□□□ -0.31
PABPN1-204ENST00000554062 PPP4R3CPQ6ZMV5 832 aa13.09□□□□□ -0.31
PABPN1-204ENST00000554062 MSH5O43196 834 aa12.98□□□□□ -0.33
PABPN1-204ENST00000554062 SLC4A1APQ9BWU0 796 aaKnown RBP12.95□□□□□ -0.34
PABPN1-204ENST00000554062 POTEDQ86YR6 584 aa12.83□□□□□ -0.36
PABPN1-204ENST00000554062 SCAF1Q9H7N4 1312 aaKnown RBP12.78□□□□□ -0.36
PABPN1-204ENST00000554062 CSRNP3Q8WYN3 585 aa12.71□□□□□ -0.37
PABPN1-204ENST00000554062 NPM3O75607 178 aaKnown RBP12.7□□□□□ -0.38
PABPN1-204ENST00000554062 CNKSR2Q8WXI2 1034 aa12.68□□□□□ -0.38
PABPN1-204ENST00000554062 DNAJC5BQ9UF47 199 aa12.43□□□□□ -0.42
PABPN1-204ENST00000554062 FOXD4L1Q9NU39 408 aa12.29□□□□□ -0.44
PABPN1-204ENST00000554062 RNF216Q9NWF9 866 aaPredicted RBP12.29□□□□□ -0.44
PABPN1-204ENST00000554062 ZBTB22O15209 634 aa12.25□□□□□ -0.45
PABPN1-204ENST00000554062 MAPK8IP2Q13387 824 aaPredicted RBP12.15□□□□□ -0.46
PABPN1-204ENST00000554062 DMRT2Q9Y5R5 561 aa12.08□□□□□ -0.48
PABPN1-204ENST00000554062 HOXD11P31277 338 aaPredicted RBP12.05□□□□□ -0.48
PABPN1-204ENST00000554062 ATXN8OSP0DMR3 200 aa11.89□□□□□ -0.51
PABPN1-204ENST00000554062 MYCNP04198 464 aaPredicted RBP11.85□□□□□ -0.51
PABPN1-204ENST00000554062 SLC4A2P04920 1241 aa11.8□□□□□ -0.52
PABPN1-204ENST00000554062 AMER1Q5JTC6 1135 aaPredicted RBP11.67□□□□□ -0.54
PABPN1-204ENST00000554062 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.61□□□□□ -0.55
PABPN1-204ENST00000554062 HNRNPUL2Q1KMD3 747 aaKnown RBP11.61□□□□□ -0.55
PABPN1-204ENST00000554062 SAMD1Q6SPF0 538 aaPredicted RBP11.54□□□□□ -0.56
PABPN1-204ENST00000554062 FKBP8Q14318 412 aa11.52□□□□□ -0.57
PABPN1-204ENST00000554062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.51□□□□□ -0.572e-12■□□□□ 10.7
PABPN1-204ENST00000554062 DCAF8L1A6NGE4 600 aa11.48□□□□□ -0.57
PABPN1-204ENST00000554062 RTN4Q9NQC3 1192 aaKnown RBP11.44□□□□□ -0.58
PABPN1-204ENST00000554062 SLC24A1O60721 1099 aa11.41□□□□□ -0.58
PABPN1-204ENST00000554062 APLP2Q06481 763 aa11.41□□□□□ -0.58
PABPN1-204ENST00000554062 U3KPZ7 1027 aaPredicted RBP11.3□□□□□ -0.6
PABPN1-204ENST00000554062 ATF5Q9Y2D1 282 aaPredicted RBP11.24□□□□□ -0.61
PABPN1-204ENST00000554062 CACNB1Q02641 598 aaPredicted RBP11.18□□□□□ -0.62
PABPN1-204ENST00000554062 ZNF219Q9P2Y4 722 aaPredicted RBP11.17□□□□□ -0.62
PABPN1-204ENST00000554062 FBXO3Q9UK99 471 aa11.14□□□□□ -0.63
PABPN1-204ENST00000554062 RNF39Q9H2S5 420 aa11.09□□□□□ -0.63
PABPN1-204ENST00000554062 FBLN2P98095 1184 aa11.03□□□□□ -0.64
PABPN1-204ENST00000554062 SPDYE4A6NLX3 237 aa11□□□□□ -0.65
PABPN1-204ENST00000554062 PROM2Q8N271 834 aa10.91□□□□□ -0.66
PABPN1-204ENST00000554062 ZBTB12Q9Y330 459 aaPredicted RBP10.91□□□□□ -0.66
PABPN1-204ENST00000554062 C1QBPQ07021 282 aaKnown RBP10.9□□□□□ -0.66
PABPN1-204ENST00000554062 TRHP20396 242 aaPredicted RBP10.84□□□□□ -0.67
PABPN1-204ENST00000554062 VASPP50552 380 aaPredicted RBP10.84□□□□□ -0.67
PABPN1-204ENST00000554062 MKRN4PQ13434 485 aaPredicted RBP10.84□□□□□ -0.67
PABPN1-204ENST00000554062 POLA2Q14181 598 aa10.8□□□□□ -0.68
PABPN1-204ENST00000554062 CAPN15O75808 1086 aa10.79□□□□□ -0.68
PABPN1-204ENST00000554062 SPINK5Q9NQ38 1064 aaPredicted RBP10.74□□□□□ -0.69
PABPN1-204ENST00000554062 PLCB2Q00722 1185 aa10.67□□□□□ -0.7
PABPN1-204ENST00000554062 IFNLR1Q8IU57 520 aaPredicted RBP10.64□□□□□ -0.71
PABPN1-204ENST00000554062 STAG3Q9UJ98 1225 aa10.63□□□□□ -0.71
PABPN1-204ENST00000554062 DCAF8L2P0C7V8 631 aa10.59□□□□□ -0.71
PABPN1-204ENST00000554062 SPDYE2BA6NHP3 402 aa10.57□□□□□ -0.72
PABPN1-204ENST00000554062 SPDYE6P0CI01 402 aa10.57□□□□□ -0.72
PABPN1-204ENST00000554062 SPDYE2Q495Y8 402 aa10.57□□□□□ -0.72
PABPN1-204ENST00000554062 ABCB7O75027 752 aa10.55□□□□□ -0.72
PABPN1-204ENST00000554062 SPOCK2Q92563 424 aa10.55□□□□□ -0.72
PABPN1-204ENST00000554062 KLHL34Q8N239 644 aa10.53□□□□□ -0.72
PABPN1-204ENST00000554062 ZNF692Q9BU19 519 aaPredicted RBP10.53□□□□□ -0.72
PABPN1-204ENST00000554062 PKD2Q13563 968 aa10.51□□□□□ -0.73
PABPN1-204ENST00000554062 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.48□□□□□ -0.73
PABPN1-204ENST00000554062 PLEKHG5O94827 1062 aa10.47□□□□□ -0.73
PABPN1-204ENST00000554062 HAP1P54257 671 aaPredicted RBP10.47□□□□□ -0.73
PABPN1-204ENST00000554062 PLCD3Q8N3E9 789 aa10.47□□□□□ -0.73
PABPN1-204ENST00000554062 SSUH2Q9Y2M2 353 aa10.47□□□□□ -0.73
PABPN1-204ENST00000554062 ZBTB47Q9UFB7 747 aaPredicted RBP10.46□□□□□ -0.73
PABPN1-204ENST00000554062 DSG3P32926 999 aa10.44□□□□□ -0.74
PABPN1-204ENST00000554062 ECM2O94769 699 aaPredicted RBP10.42□□□□□ -0.74
PABPN1-204ENST00000554062 VSIG10Q8N0Z9 540 aa10.42□□□□□ -0.74
PABPN1-204ENST00000554062 OSCARQ8IYS5 282 aa10.41□□□□□ -0.74
PABPN1-204ENST00000554062 BBXQ8WY36 941 aaPredicted RBP10.41□□□□□ -0.74
PABPN1-204ENST00000554062 BCANQ96GW7 911 aa10.39□□□□□ -0.75
PABPN1-204ENST00000554062 PABPN1Q86U42 306 aaKnown RBP eCLIP10.38□□□□□ -0.75
PABPN1-204ENST00000554062 MIER1Q8N108 512 aa10.37□□□□□ -0.75
PABPN1-204ENST00000554062 TRIM41Q8WV44 630 aa10.36□□□□□ -0.75
PABPN1-204ENST00000554062 PAXIP1Q6ZW49 1069 aaPredicted RBP10.24□□□□□ -0.77
PABPN1-204ENST00000554062 SPRYD3Q8NCJ5 442 aa10.23□□□□□ -0.77
PABPN1-204ENST00000554062 TAOK2Q9UL54 1235 aa10.23□□□□□ -0.77
PABPN1-204ENST00000554062 CIZ1Q9ULV3 898 aaPredicted RBP10.23□□□□□ -0.77
PABPN1-204ENST00000554062 RGL2O15211 777 aa10.22□□□□□ -0.77
PABPN1-204ENST00000554062 GSE1Q14687 1217 aa10.2□□□□□ -0.78
PABPN1-204ENST00000554062 CFAP44Q96MT7 982 aa10.2□□□□□ -0.78
PABPN1-204ENST00000554062 NPM1P06748 294 aaKnown RBP eCLIP10.16□□□□□ -0.78
PABPN1-204ENST00000554062 CHGAP10645 457 aaKnown RBP10.14□□□□□ -0.79
PABPN1-204ENST00000554062 RBM42Q9BTD8 480 aaKnown RBP10.13□□□□□ -0.79
PABPN1-204ENST00000554062 HS6ST3Q8IZP7 471 aa10.12□□□□□ -0.79
PABPN1-204ENST00000554062 SPDYE1Q8NFV5 336 aaPredicted RBP10.12□□□□□ -0.79
PABPN1-204ENST00000554062 DNAJC5Q9H3Z4 198 aa10.08□□□□□ -0.8
PABPN1-204ENST00000554062 KDM2AQ9Y2K7 1162 aa10.07□□□□□ -0.8
PABPN1-204ENST00000554062 AKT1S1Q96B36 256 aa10.05□□□□□ -0.8
PABPN1-204ENST00000554062 FAM212AQ96EL1 285 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms