RNA–Protein interactions for RNA: ENST00000553734.5

RAD51B-217, Transcript of RAD51 paralog B, humanhuman

TSL 3

Gene RAD51B, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-217ENST00000553734 AEBP2Q6ZN18 517 aaPredicted RBP17.3■□□□□ 0.36
RAD51B-217ENST00000553734 CHIC1Q5VXU3 224 aa16.75■□□□□ 0.27
RAD51B-217ENST00000553734 PHF23Q9BUL5 403 aaPredicted RBP14.74□□□□□ -0.05
RAD51B-217ENST00000553734 SENP3Q9H4L4 574 aaPredicted RBP14.66□□□□□ -0.06
RAD51B-217ENST00000553734 FOXD1Q16676 465 aa13.65□□□□□ -0.22
RAD51B-217ENST00000553734 PLPPR3Q6T4P5 718 aa13.55□□□□□ -0.24
RAD51B-217ENST00000553734 PPP6R1Q9UPN7 881 aa13.06□□□□□ -0.32
RAD51B-217ENST00000553734 ADRA2BP18089 450 aa13.05□□□□□ -0.32
RAD51B-217ENST00000553734 PIAS4Q8N2W9 510 aaPredicted RBP12.86□□□□□ -0.35
RAD51B-217ENST00000553734 MSH5O43196 834 aa12.6□□□□□ -0.39
RAD51B-217ENST00000553734 PPP4R3CPQ6ZMV5 832 aa11.94□□□□□ -0.5
RAD51B-217ENST00000553734 SCAF1Q9H7N4 1312 aaKnown RBP11.88□□□□□ -0.51
RAD51B-217ENST00000553734 MAPK8IP2Q13387 824 aaPredicted RBP11.88□□□□□ -0.51
RAD51B-217ENST00000553734 KCNA4P22459 653 aa11.86□□□□□ -0.51
RAD51B-217ENST00000553734 POTEDQ86YR6 584 aa11.72□□□□□ -0.53
RAD51B-217ENST00000553734 DMRT2Q9Y5R5 561 aa11.68□□□□□ -0.54
RAD51B-217ENST00000553734 EHMT2Q96KQ7 1210 aa11.62□□□□□ -0.55
RAD51B-217ENST00000553734 CNKSR2Q8WXI2 1034 aa11.61□□□□□ -0.55
RAD51B-217ENST00000553734 NCBP3Q53F19 620 aaKnown RBP11.56□□□□□ -0.56
RAD51B-217ENST00000553734 NPM3O75607 178 aaKnown RBP11.43□□□□□ -0.58
RAD51B-217ENST00000553734 RNF216Q9NWF9 866 aaPredicted RBP11.41□□□□□ -0.58
RAD51B-217ENST00000553734 HOXD11P31277 338 aaPredicted RBP11.39□□□□□ -0.59
RAD51B-217ENST00000553734 CSRNP3Q8WYN3 585 aa11.38□□□□□ -0.59
RAD51B-217ENST00000553734 SLC4A1APQ9BWU0 796 aaKnown RBP11.38□□□□□ -0.59
RAD51B-217ENST00000553734 DCAF8L1A6NGE4 600 aa11.25□□□□□ -0.61
RAD51B-217ENST00000553734 DNAJC5BQ9UF47 199 aa11.02□□□□□ -0.65
RAD51B-217ENST00000553734 ZBTB22O15209 634 aa10.95□□□□□ -0.66
RAD51B-217ENST00000553734 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.89□□□□□ -0.677e-7■□□□□ 9.1
RAD51B-217ENST00000553734 SLC4A2P04920 1241 aa10.82□□□□□ -0.68
RAD51B-217ENST00000553734 RNF39Q9H2S5 420 aa10.8□□□□□ -0.68
RAD51B-217ENST00000553734 FOXD4L1Q9NU39 408 aa10.77□□□□□ -0.69
RAD51B-217ENST00000553734 U3KPZ7 1027 aaPredicted RBP10.7□□□□□ -0.7
RAD51B-217ENST00000553734 C1QBPQ07021 282 aaKnown RBP10.65□□□□□ -0.7
RAD51B-217ENST00000553734 CACNB1Q02641 598 aaPredicted RBP10.64□□□□□ -0.71
RAD51B-217ENST00000553734 MYCNP04198 464 aaPredicted RBP10.54□□□□□ -0.72
RAD51B-217ENST00000553734 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.47□□□□□ -0.73
RAD51B-217ENST00000553734 HNRNPUL2Q1KMD3 747 aaKnown RBP10.47□□□□□ -0.73
RAD51B-217ENST00000553734 SPINK5Q9NQ38 1064 aaPredicted RBP10.45□□□□□ -0.74
RAD51B-217ENST00000553734 SAMD1Q6SPF0 538 aaPredicted RBP10.44□□□□□ -0.74
RAD51B-217ENST00000553734 ATXN8OSP0DMR3 200 aa10.43□□□□□ -0.74
RAD51B-217ENST00000553734 CAPN15O75808 1086 aa10.42□□□□□ -0.74
RAD51B-217ENST00000553734 APLP2Q06481 763 aa10.39□□□□□ -0.75
RAD51B-217ENST00000553734 TRHP20396 242 aaPredicted RBP10.35□□□□□ -0.75
RAD51B-217ENST00000553734 AMER1Q5JTC6 1135 aaPredicted RBP10.35□□□□□ -0.75
RAD51B-217ENST00000553734 ATF5Q9Y2D1 282 aaPredicted RBP10.31□□□□□ -0.76
RAD51B-217ENST00000553734 RTN4Q9NQC3 1192 aaKnown RBP10.3□□□□□ -0.76
RAD51B-217ENST00000553734 ZNF219Q9P2Y4 722 aaPredicted RBP10.29□□□□□ -0.76
RAD51B-217ENST00000553734 SLC24A1O60721 1099 aa10.25□□□□□ -0.77
RAD51B-217ENST00000553734 DSG3P32926 999 aa10.24□□□□□ -0.77
RAD51B-217ENST00000553734 ABCB7O75027 752 aa10.23□□□□□ -0.77
RAD51B-217ENST00000553734 FKBP8Q14318 412 aa10.15□□□□□ -0.78
RAD51B-217ENST00000553734 POLA2Q14181 598 aa10.14□□□□□ -0.79
RAD51B-217ENST00000553734 ZBTB12Q9Y330 459 aaPredicted RBP9.9□□□□□ -0.82
RAD51B-217ENST00000553734 FBLN2P98095 1184 aa9.85□□□□□ -0.83
RAD51B-217ENST00000553734 MKRN4PQ13434 485 aaPredicted RBP9.84□□□□□ -0.83
RAD51B-217ENST00000553734 OSCARQ8IYS5 282 aa9.81□□□□□ -0.84
RAD51B-217ENST00000553734 RBM42Q9BTD8 480 aaKnown RBP9.75□□□□□ -0.85
RAD51B-217ENST00000553734 PROM2Q8N271 834 aa9.72□□□□□ -0.85
RAD51B-217ENST00000553734 FBXO3Q9UK99 471 aa9.71□□□□□ -0.86
RAD51B-217ENST00000553734 SPDYE2BA6NHP3 402 aa9.65□□□□□ -0.86
RAD51B-217ENST00000553734 SPDYE6P0CI01 402 aa9.65□□□□□ -0.86
RAD51B-217ENST00000553734 SPDYE2Q495Y8 402 aa9.65□□□□□ -0.86
RAD51B-217ENST00000553734 SPDYE4A6NLX3 237 aa9.63□□□□□ -0.87
RAD51B-217ENST00000553734 ZNF692Q9BU19 519 aaPredicted RBP9.62□□□□□ -0.87
RAD51B-217ENST00000553734 AKT1S1Q96B36 256 aa9.61□□□□□ -0.87
RAD51B-217ENST00000553734 SSUH2Q9Y2M2 353 aa9.57□□□□□ -0.88
RAD51B-217ENST00000553734 VASPP50552 380 aaPredicted RBP9.54□□□□□ -0.88
RAD51B-217ENST00000553734 PLCB2Q00722 1185 aa9.53□□□□□ -0.88
RAD51B-217ENST00000553734 REM2Q8IYK8 340 aaPredicted RBP9.53□□□□□ -0.88
RAD51B-217ENST00000553734 PABPN1Q86U42 306 aaKnown RBP eCLIP9.5□□□□□ -0.89
RAD51B-217ENST00000553734 IFNLR1Q8IU57 520 aaPredicted RBP9.47□□□□□ -0.89
RAD51B-217ENST00000553734 PITPNM1O00562 1244 aa9.43□□□□□ -0.9
RAD51B-217ENST00000553734 CLEC11AQ9Y240 323 aa9.42□□□□□ -0.9
RAD51B-217ENST00000553734 CHRDL2Q6WN34 429 aa9.41□□□□□ -0.9
RAD51B-217ENST00000553734 PKD2Q13563 968 aa9.4□□□□□ -0.9
RAD51B-217ENST00000553734 SPDYE1Q8NFV5 336 aaPredicted RBP9.4□□□□□ -0.9
RAD51B-217ENST00000553734 VSIG10Q8N0Z9 540 aa9.3□□□□□ -0.92
RAD51B-217ENST00000553734 PRR29P0C7W0 189 aa9.28□□□□□ -0.92
RAD51B-217ENST00000553734 HAP1P54257 671 aaPredicted RBP9.27□□□□□ -0.93
RAD51B-217ENST00000553734 PIP4P2Q8N4L2 257 aa9.27□□□□□ -0.93
RAD51B-217ENST00000553734 STAG3Q9UJ98 1225 aa9.27□□□□□ -0.93
RAD51B-217ENST00000553734 FXR2P51116 673 aaKnown RBP eCLIP9.25□□□□□ -0.93
RAD51B-217ENST00000553734 POTEHQ6S545 545 aa9.25□□□□□ -0.93
RAD51B-217ENST00000553734 SPOCK2Q92563 424 aa9.24□□□□□ -0.93
RAD51B-217ENST00000553734 BCANQ96GW7 911 aa9.24□□□□□ -0.93
RAD51B-217ENST00000553734 BBXQ8WY36 941 aaPredicted RBP9.22□□□□□ -0.93
RAD51B-217ENST00000553734 CHADLQ6NUI6 762 aa9.21□□□□□ -0.94
RAD51B-217ENST00000553734 DCAF8L2P0C7V8 631 aa9.2□□□□□ -0.94
RAD51B-217ENST00000553734 PRKAR2AP13861 404 aaKnown RBP9.2□□□□□ -0.94
RAD51B-217ENST00000553734 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.16□□□□□ -0.94
RAD51B-217ENST00000553734 ECM2O94769 699 aaPredicted RBP9.15□□□□□ -0.94
RAD51B-217ENST00000553734 NPM1P06748 294 aaKnown RBP eCLIP9.15□□□□□ -0.94
RAD51B-217ENST00000553734 KLHL34Q8N239 644 aa9.14□□□□□ -0.95
RAD51B-217ENST00000553734 CREBZFQ9NS37 354 aa9.14□□□□□ -0.95
RAD51B-217ENST00000553734 KDM2AQ9Y2K7 1162 aa9.12□□□□□ -0.95
RAD51B-217ENST00000553734 TAOK2Q9UL54 1235 aa9.11□□□□□ -0.95
RAD51B-217ENST00000553734 MIER1Q8N108 512 aa9.09□□□□□ -0.95
RAD51B-217ENST00000553734 RGL2O15211 777 aa9.07□□□□□ -0.96
RAD51B-217ENST00000553734 PAXIP1Q6ZW49 1069 aaPredicted RBP9.06□□□□□ -0.96
RAD51B-217ENST00000553734 PLCD3Q8N3E9 789 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms