RNA–Protein interactions for RNA: ENST00000549457.1

NOP56P3-201, Transcript of NOP56 ribonucleoprotein pseudogene 3, humanhuman

BASIC

Gene NOP56P3, Length 385 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56P3-201ENST00000549457 CHIC1Q5VXU3 224 aa21.66■■□□□ 1.06
NOP56P3-201ENST00000549457 AEBP2Q6ZN18 517 aaPredicted RBP21.52■■□□□ 1.04
NOP56P3-201ENST00000549457 PHF23Q9BUL5 403 aaPredicted RBP19.04■□□□□ 0.64
NOP56P3-201ENST00000549457 SENP3Q9H4L4 574 aaPredicted RBP18.3■□□□□ 0.52
NOP56P3-201ENST00000549457 PLPPR3Q6T4P5 718 aa17.89■□□□□ 0.45
NOP56P3-201ENST00000549457 FOXD1Q16676 465 aa16.82■□□□□ 0.28
NOP56P3-201ENST00000549457 ADRA2BP18089 450 aa16.63■□□□□ 0.25
NOP56P3-201ENST00000549457 PPP6R1Q9UPN7 881 aa16.59■□□□□ 0.25
NOP56P3-201ENST00000549457 PIAS4Q8N2W9 510 aaPredicted RBP16.06■□□□□ 0.16
NOP56P3-201ENST00000549457 KCNA4P22459 653 aa16.04■□□□□ 0.16
NOP56P3-201ENST00000549457 PPP4R3CPQ6ZMV5 832 aa15.79■□□□□ 0.12
NOP56P3-201ENST00000549457 NCBP3Q53F19 620 aaKnown RBP15.64■□□□□ 0.09
NOP56P3-201ENST00000549457 EHMT2Q96KQ7 1210 aa15.6■□□□□ 0.09
NOP56P3-201ENST00000549457 SLC4A1APQ9BWU0 796 aaKnown RBP15.43■□□□□ 0.06
NOP56P3-201ENST00000549457 MSH5O43196 834 aa15.4■□□□□ 0.06
NOP56P3-201ENST00000549457 SCAF1Q9H7N4 1312 aaKnown RBP15.37■□□□□ 0.05
NOP56P3-201ENST00000549457 NPM3O75607 178 aaKnown RBP15.3■□□□□ 0.04
NOP56P3-201ENST00000549457 CNKSR2Q8WXI2 1034 aa15.26■□□□□ 0.03
NOP56P3-201ENST00000549457 CSRNP3Q8WYN3 585 aa15.14■□□□□ 0.01
NOP56P3-201ENST00000549457 MAPK8IP2Q13387 824 aaPredicted RBP14.89□□□□□ -0.03
NOP56P3-201ENST00000549457 DNAJC5BQ9UF47 199 aa14.86□□□□□ -0.03
NOP56P3-201ENST00000549457 RNF216Q9NWF9 866 aaPredicted RBP14.83□□□□□ -0.04
NOP56P3-201ENST00000549457 ZBTB22O15209 634 aa14.73□□□□□ -0.05
NOP56P3-201ENST00000549457 FOXD4L1Q9NU39 408 aa14.66□□□□□ -0.06
NOP56P3-201ENST00000549457 DMRT2Q9Y5R5 561 aa14.66□□□□□ -0.06
NOP56P3-201ENST00000549457 HOXD11P31277 338 aaPredicted RBP14.59□□□□□ -0.07
NOP56P3-201ENST00000549457 SLC4A2P04920 1241 aa14.27□□□□□ -0.13
NOP56P3-201ENST00000549457 MYCNP04198 464 aaPredicted RBP14.2□□□□□ -0.14
NOP56P3-201ENST00000549457 ATXN8OSP0DMR3 200 aa14.15□□□□□ -0.14
NOP56P3-201ENST00000549457 DCAF8L1A6NGE4 600 aa14□□□□□ -0.17
NOP56P3-201ENST00000549457 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.92□□□□□ -0.18
NOP56P3-201ENST00000549457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.87□□□□□ -0.19
NOP56P3-201ENST00000549457 HNRNPUL2Q1KMD3 747 aaKnown RBP13.87□□□□□ -0.19
NOP56P3-201ENST00000549457 SAMD1Q6SPF0 538 aaPredicted RBP13.82□□□□□ -0.2
NOP56P3-201ENST00000549457 U3KPZ7 1027 aaPredicted RBP13.71□□□□□ -0.21
NOP56P3-201ENST00000549457 FKBP8Q14318 412 aa13.69□□□□□ -0.22
NOP56P3-201ENST00000549457 ATF5Q9Y2D1 282 aaPredicted RBP13.64□□□□□ -0.23
NOP56P3-201ENST00000549457 APLP2Q06481 763 aa13.62□□□□□ -0.23
NOP56P3-201ENST00000549457 AMER1Q5JTC6 1135 aaPredicted RBP13.56□□□□□ -0.24
NOP56P3-201ENST00000549457 ZNF219Q9P2Y4 722 aaPredicted RBP13.45□□□□□ -0.26
NOP56P3-201ENST00000549457 RTN4Q9NQC3 1192 aaKnown RBP13.43□□□□□ -0.26
NOP56P3-201ENST00000549457 FBLN2P98095 1184 aa13.19□□□□□ -0.3
NOP56P3-201ENST00000549457 RNF39Q9H2S5 420 aa13.19□□□□□ -0.3
NOP56P3-201ENST00000549457 TRHP20396 242 aaPredicted RBP13.18□□□□□ -0.3
NOP56P3-201ENST00000549457 SPDYE4A6NLX3 237 aa13.16□□□□□ -0.3
NOP56P3-201ENST00000549457 FBXO3Q9UK99 471 aa13.15□□□□□ -0.3
NOP56P3-201ENST00000549457 SLC24A1O60721 1099 aa13.13□□□□□ -0.31
NOP56P3-201ENST00000549457 SPINK5Q9NQ38 1064 aaPredicted RBP13.13□□□□□ -0.31
NOP56P3-201ENST00000549457 CAPN15O75808 1086 aa13.12□□□□□ -0.31
NOP56P3-201ENST00000549457 C1QBPQ07021 282 aaKnown RBP13.12□□□□□ -0.31
NOP56P3-201ENST00000549457 MKRN4PQ13434 485 aaPredicted RBP13.11□□□□□ -0.31
NOP56P3-201ENST00000549457 POLA2Q14181 598 aa13.09□□□□□ -0.31
NOP56P3-201ENST00000549457 POTEDQ86YR6 584 aa13.08□□□□□ -0.32
NOP56P3-201ENST00000549457 ZBTB12Q9Y330 459 aaPredicted RBP13.04□□□□□ -0.32
NOP56P3-201ENST00000549457 PROM2Q8N271 834 aa13.01□□□□□ -0.33
NOP56P3-201ENST00000549457 VASPP50552 380 aaPredicted RBP12.89□□□□□ -0.35
NOP56P3-201ENST00000549457 ABCB7O75027 752 aa12.87□□□□□ -0.35
NOP56P3-201ENST00000549457 DSG3P32926 999 aa12.73□□□□□ -0.37
NOP56P3-201ENST00000549457 IFNLR1Q8IU57 520 aaPredicted RBP12.7□□□□□ -0.38
NOP56P3-201ENST00000549457 ZNF692Q9BU19 519 aaPredicted RBP12.69□□□□□ -0.38
NOP56P3-201ENST00000549457 SPDYE2BA6NHP3 402 aa12.68□□□□□ -0.38
NOP56P3-201ENST00000549457 SPDYE6P0CI01 402 aa12.68□□□□□ -0.38
NOP56P3-201ENST00000549457 SPDYE2Q495Y8 402 aa12.68□□□□□ -0.38
NOP56P3-201ENST00000549457 STAG3Q9UJ98 1225 aa12.63□□□□□ -0.39
NOP56P3-201ENST00000549457 OSCARQ8IYS5 282 aa12.61□□□□□ -0.39
NOP56P3-201ENST00000549457 SSUH2Q9Y2M2 353 aa12.6□□□□□ -0.39
NOP56P3-201ENST00000549457 KLHL34Q8N239 644 aa12.55□□□□□ -0.4
NOP56P3-201ENST00000549457 SPOCK2Q92563 424 aa12.52□□□□□ -0.41
NOP56P3-201ENST00000549457 DCAF8L2P0C7V8 631 aa12.51□□□□□ -0.41
NOP56P3-201ENST00000549457 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
NOP56P3-201ENST00000549457 PKD2Q13563 968 aa12.49□□□□□ -0.41
NOP56P3-201ENST00000549457 PLCD3Q8N3E9 789 aa12.49□□□□□ -0.41
NOP56P3-201ENST00000549457 PLCB2Q00722 1185 aa12.47□□□□□ -0.41
NOP56P3-201ENST00000549457 CACNB1Q02641 598 aaPredicted RBP12.45□□□□□ -0.42
NOP56P3-201ENST00000549457 MIER1Q8N108 512 aa12.43□□□□□ -0.42
NOP56P3-201ENST00000549457 PLEKHG5O94827 1062 aa12.42□□□□□ -0.42
NOP56P3-201ENST00000549457 ZBTB47Q9UFB7 747 aaPredicted RBP12.4□□□□□ -0.42
NOP56P3-201ENST00000549457 ECM2O94769 699 aaPredicted RBP12.37□□□□□ -0.43
NOP56P3-201ENST00000549457 HAP1P54257 671 aaPredicted RBP12.28□□□□□ -0.44
NOP56P3-201ENST00000549457 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.27□□□□□ -0.45
NOP56P3-201ENST00000549457 BBXQ8WY36 941 aaPredicted RBP12.24□□□□□ -0.45
NOP56P3-201ENST00000549457 RBM42Q9BTD8 480 aaKnown RBP12.23□□□□□ -0.45
NOP56P3-201ENST00000549457 TRIM41Q8WV44 630 aa12.21□□□□□ -0.45
NOP56P3-201ENST00000549457 CIZ1Q9ULV3 898 aaPredicted RBP12.21□□□□□ -0.45
NOP56P3-201ENST00000549457 SPDYE1Q8NFV5 336 aaPredicted RBP12.18□□□□□ -0.46
NOP56P3-201ENST00000549457 RGL2O15211 777 aa12.17□□□□□ -0.46
NOP56P3-201ENST00000549457 AKT1S1Q96B36 256 aa12.16□□□□□ -0.46
NOP56P3-201ENST00000549457 VSIG10Q8N0Z9 540 aa12.14□□□□□ -0.47
NOP56P3-201ENST00000549457 GSE1Q14687 1217 aa12.12□□□□□ -0.47
NOP56P3-201ENST00000549457 NPM1P06748 294 aaKnown RBP eCLIP12.1□□□□□ -0.47
NOP56P3-201ENST00000549457 PAXIP1Q6ZW49 1069 aaPredicted RBP12.09□□□□□ -0.47
NOP56P3-201ENST00000549457 CFAP44Q96MT7 982 aa12.06□□□□□ -0.48
NOP56P3-201ENST00000549457 SPRYD3Q8NCJ5 442 aa12.05□□□□□ -0.48
NOP56P3-201ENST00000549457 PRR29P0C7W0 189 aa12.04□□□□□ -0.48
NOP56P3-201ENST00000549457 CHGAP10645 457 aaKnown RBP12.04□□□□□ -0.48
NOP56P3-201ENST00000549457 CLEC11AQ9Y240 323 aa12.04□□□□□ -0.48
NOP56P3-201ENST00000549457 BCANQ96GW7 911 aa12.02□□□□□ -0.49
NOP56P3-201ENST00000549457 TAOK2Q9UL54 1235 aa12.02□□□□□ -0.49
NOP56P3-201ENST00000549457 NUBP1P53384 320 aa12.01□□□□□ -0.49
NOP56P3-201ENST00000549457 REM2Q8IYK8 340 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms