RNA–Protein interactions for RNA: ENST00000545334.5

PPFIBP1-216, Transcript of PPFIA binding protein 1, humanhuman

TSL 2 BASIC

Gene PPFIBP1, Length 2,805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-216ENST00000545334 NISCHQ9Y2I1 1504 aa31.29■■■□□ 2.6
PPFIBP1-216ENST00000545334 SHROOM4Q9ULL8 1493 aa26.71■■□□□ 1.87
PPFIBP1-216ENST00000545334 CCDC180Q9P1Z9 1646 aa26.54■■□□□ 1.84
PPFIBP1-216ENST00000545334 ZCCHC6Q5VYS8 1495 aaKnown RBP26.47■■□□□ 1.83
PPFIBP1-216ENST00000545334 SUPT5HO00267 1087 aaKnown RBP26.2■■□□□ 1.79
PPFIBP1-216ENST00000545334 DCAF8L2P0C7V8 631 aa25.94■■□□□ 1.74
PPFIBP1-216ENST00000545334 DCAF1Q9Y4B6 1507 aa25.66■■□□□ 1.7
PPFIBP1-216ENST00000545334 CHIC1Q5VXU3 224 aa25.51■■□□□ 1.67
PPFIBP1-216ENST00000545334 MYO15BQ96JP2 1530 aa25.43■■□□□ 1.66
PPFIBP1-216ENST00000545334 ABCC9O60706 1549 aa24.97■■□□□ 1.59
PPFIBP1-216ENST00000545334 SCRIBQ14160 1630 aa24.92■■□□□ 1.58
PPFIBP1-216ENST00000545334 RSF1Q96T23 1441 aaPredicted RBP24.79■■□□□ 1.56
PPFIBP1-216ENST00000545334 LOC105371045A0A1W2PR82 267 aa24.77■■□□□ 1.56
PPFIBP1-216ENST00000545334 HRCP23327 699 aa24.75■■□□□ 1.55
PPFIBP1-216ENST00000545334 PCGF6Q9BYE7 350 aa24.73■■□□□ 1.55
PPFIBP1-216ENST00000545334 NACADO15069 1562 aa24.55■■□□□ 1.52
PPFIBP1-216ENST00000545334 RB1CC1Q8TDY2 1594 aa24.52■■□□□ 1.52
PPFIBP1-216ENST00000545334 CECR2Q9BXF3 1484 aa24.44■■□□□ 1.5
PPFIBP1-216ENST00000545334 TRIM41Q8WV44 630 aa24.4■■□□□ 1.5
PPFIBP1-216ENST00000545334 MROH2BQ7Z745 1585 aa24.34■■□□□ 1.49
PPFIBP1-216ENST00000545334 PPARGC1BQ86YN6 1023 aaKnown RBP24.26■■□□□ 1.47
PPFIBP1-216ENST00000545334 TRIM26Q12899 539 aaPredicted RBP24.25■■□□□ 1.47
PPFIBP1-216ENST00000545334 FAM9AQ8IZU1 332 aaPredicted RBP24.21■■□□□ 1.47
PPFIBP1-216ENST00000545334 WIZO95785 1651 aa24.21■■□□□ 1.47
PPFIBP1-216ENST00000545334 BAZ1AQ9NRL2 1556 aaPredicted RBP24.03■■□□□ 1.44
PPFIBP1-216ENST00000545334 EHMT2Q96KQ7 1210 aa24.01■■□□□ 1.43
PPFIBP1-216ENST00000545334 EIF4G1Q04637 1599 aaKnown RBP23.89■■□□□ 1.42
PPFIBP1-216ENST00000545334 SMARCA4P51532 1647 aa23.81■■□□□ 1.4
PPFIBP1-216ENST00000545334 TOP2AP11388 1531 aaKnown RBP23.81■■□□□ 1.4
PPFIBP1-216ENST00000545334 UNC13AQ9UPW8 1703 aa23.8■■□□□ 1.4
PPFIBP1-216ENST00000545334 CCDC88BA6NC98 1476 aa23.74■■□□□ 1.39
PPFIBP1-216ENST00000545334 SMARCA2P51531 1590 aa23.69■■□□□ 1.38
PPFIBP1-216ENST00000545334 ABCC8Q09428 1581 aa23.68■■□□□ 1.38
PPFIBP1-216ENST00000545334 ZEB1P37275 1124 aaPredicted RBP23.68■■□□□ 1.38
PPFIBP1-216ENST00000545334 PABPN1Q86U42 306 aaKnown RBP eCLIP23.57■■□□□ 1.36
PPFIBP1-216ENST00000545334 BICRAQ9NZM4 1560 aa23.53■■□□□ 1.36
PPFIBP1-216ENST00000545334 SOGA1O94964 1423 aa23.48■■□□□ 1.35
PPFIBP1-216ENST00000545334 RUSC2Q8N2Y8 1516 aa23.38■■□□□ 1.33
PPFIBP1-216ENST00000545334 CEP162Q5TB80 1403 aa23.36■■□□□ 1.33
PPFIBP1-216ENST00000545334 PEG3Q9GZU2 1588 aa23.36■■□□□ 1.33
PPFIBP1-216ENST00000545334 WRNQ14191 1432 aaPredicted RBP eCLIP23.34■■□□□ 1.33
PPFIBP1-216ENST00000545334 CSRNP3Q8WYN3 585 aa23.33■■□□□ 1.33
PPFIBP1-216ENST00000545334 TNIKQ9UKE5 1360 aa23.33■■□□□ 1.32
PPFIBP1-216ENST00000545334 EEA1Q15075 1411 aa23.31■■□□□ 1.32
PPFIBP1-216ENST00000545334 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.29■■□□□ 1.32
PPFIBP1-216ENST00000545334 TTBK1Q5TCY1 1321 aaPredicted RBP23.24■■□□□ 1.31
PPFIBP1-216ENST00000545334 UBTFP17480 764 aaKnown RBP23.23■■□□□ 1.31
PPFIBP1-216ENST00000545334 ATAD2BQ9ULI0 1458 aa23.21■■□□□ 1.31
PPFIBP1-216ENST00000545334 CCER1Q8TC90 406 aaPredicted RBP23.2■■□□□ 1.3
PPFIBP1-216ENST00000545334 GOLGA3Q08378 1498 aa23.17■■□□□ 1.3
PPFIBP1-216ENST00000545334 SYNJ1O43426 1573 aa23.16■■□□□ 1.3
PPFIBP1-216ENST00000545334 BAZ1BQ9UIG0 1483 aaKnown RBP23.13■■□□□ 1.29
PPFIBP1-216ENST00000545334 CEP164Q9UPV0 1460 aa23.04■■□□□ 1.28
PPFIBP1-216ENST00000545334 KIF21BO75037 1637 aa23■■□□□ 1.27
PPFIBP1-216ENST00000545334 CLIP1P30622 1438 aa22.92■■□□□ 1.26
PPFIBP1-216ENST00000545334 RAPGEF2Q9Y4G8 1499 aa22.9■■□□□ 1.26
PPFIBP1-216ENST00000545334 TOP2BQ02880 1626 aa22.86■■□□□ 1.25
PPFIBP1-216ENST00000545334 VPS8Q8N3P4 1428 aa22.82■■□□□ 1.24
PPFIBP1-216ENST00000545334 SCAF1Q9H7N4 1312 aaKnown RBP22.82■■□□□ 1.24
PPFIBP1-216ENST00000545334 RANGAP1P46060 587 aaPredicted RBP22.77■■□□□ 1.24
PPFIBP1-216ENST00000545334 BIVM-ERCC5R4GMW8 1640 aa22.77■■□□□ 1.24
PPFIBP1-216ENST00000545334 DIEXFQ68CQ4 756 aaKnown RBP22.77■■□□□ 1.23
PPFIBP1-216ENST00000545334 NCAPD3P42695 1498 aa22.75■■□□□ 1.23
PPFIBP1-216ENST00000545334 HNRNPUL2Q1KMD3 747 aaKnown RBP22.74■■□□□ 1.23
PPFIBP1-216ENST00000545334 HMGXB3Q12766 1538 aa22.73■■□□□ 1.23
PPFIBP1-216ENST00000545334 APLP2Q06481 763 aa22.69■■□□□ 1.22
PPFIBP1-216ENST00000545334 PRXQ9BXM0 1461 aa22.67■■□□□ 1.22
PPFIBP1-216ENST00000545334 CUX1P39880 1505 aa22.66■■□□□ 1.22
PPFIBP1-216ENST00000545334 ERICH3Q5RHP9 1530 aa22.63■■□□□ 1.21
PPFIBP1-216ENST00000545334 ZNF316A6NFI3 1004 aaPredicted RBP22.59■■□□□ 1.21
PPFIBP1-216ENST00000545334 ACIN1Q9UKV3 1341 aaKnown RBP22.59■■□□□ 1.21
PPFIBP1-216ENST00000545334 CFTRP13569 1480 aa22.58■■□□□ 1.21
PPFIBP1-216ENST00000545334 NEUROD1Q13562 356 aa22.58■■□□□ 1.21
PPFIBP1-216ENST00000545334 ARAP1Q96P48 1450 aa22.56■■□□□ 1.2
PPFIBP1-216ENST00000545334 KIF27Q86VH2 1401 aa22.53■■□□□ 1.2
PPFIBP1-216ENST00000545334 KANK4Q5T7N3 995 aaPredicted RBP22.48■■□□□ 1.19
PPFIBP1-216ENST00000545334 CENPBP07199 599 aaPredicted RBP22.41■■□□□ 1.18
PPFIBP1-216ENST00000545334 ARHGAP35Q9NRY4 1499 aa22.37■■□□□ 1.17
PPFIBP1-216ENST00000545334 PRDM2Q13029 1718 aa22.33■■□□□ 1.17
PPFIBP1-216ENST00000545334 GTF3C3Q9Y5Q9 886 aa22.33■■□□□ 1.17
PPFIBP1-216ENST00000545334 CUX2O14529 1486 aa22.33■■□□□ 1.16
PPFIBP1-216ENST00000545334 IGF1RP08069 1367 aa22.33■■□□□ 1.16
PPFIBP1-216ENST00000545334 CADPSQ9ULU8 1353 aa22.33■■□□□ 1.16
PPFIBP1-216ENST00000545334 DHX57Q6P158 1386 aaKnown RBP22.31■■□□□ 1.16
PPFIBP1-216ENST00000545334 RRBP1Q9P2E9 1410 aaKnown RBP22.3■■□□□ 1.16
PPFIBP1-216ENST00000545334 MIER1Q8N108 512 aa22.3■■□□□ 1.16
PPFIBP1-216ENST00000545334 CLSPNQ9HAW4 1339 aa22.26■■□□□ 1.15
PPFIBP1-216ENST00000545334 PELP1Q8IZL8 1130 aaKnown RBP22.24■■□□□ 1.15
PPFIBP1-216ENST00000545334 FGD5Q6ZNL6 1462 aa22.24■■□□□ 1.15
PPFIBP1-216ENST00000545334 YTHDC1Q96MU7 727 aaKnown RBP22.22■■□□□ 1.15
PPFIBP1-216ENST00000545334 CARMIL1Q5VZK9 1371 aa22.21■■□□□ 1.15
PPFIBP1-216ENST00000545334 CCNB3Q8WWL7 1395 aa22.21■■□□□ 1.15
PPFIBP1-216ENST00000545334 CC2D2AQ9P2K1 1620 aa22.15■■□□□ 1.14
PPFIBP1-216ENST00000545334 ITGAEP38570 1179 aa22.13■■□□□ 1.13
PPFIBP1-216ENST00000545334 FANCD2Q9BXW9 1451 aa22.1■■□□□ 1.13
PPFIBP1-216ENST00000545334 TIAM1Q13009 1591 aa22.1■■□□□ 1.13
PPFIBP1-216ENST00000545334 MAP3K1Q13233 1512 aa22.08■■□□□ 1.12
PPFIBP1-216ENST00000545334 LRRC9Q6ZRR7 1453 aa22.03■■□□□ 1.12
PPFIBP1-216ENST00000545334 RAD54L2Q9Y4B4 1467 aa22.03■■□□□ 1.12
PPFIBP1-216ENST00000545334 P3H3Q8IVL6 736 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms