RNA–Protein interactions for RNA: ENST00000541653.2

AC243972.2-201, humanhuman

BASIC

Gene AC243972.2, Length 991 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243972.2-201ENST00000541653 CHIC1Q5VXU3 224 aa28.72■■■□□ 2.19
AC243972.2-201ENST00000541653 AEBP2Q6ZN18 517 aaPredicted RBP28.14■■■□□ 2.1
AC243972.2-201ENST00000541653 PHF23Q9BUL5 403 aaPredicted RBP25.37■■□□□ 1.65
AC243972.2-201ENST00000541653 PLPPR3Q6T4P5 718 aa23.92■■□□□ 1.42
AC243972.2-201ENST00000541653 SENP3Q9H4L4 574 aaPredicted RBP23.73■■□□□ 1.39
AC243972.2-201ENST00000541653 ADRA2BP18089 450 aa22.34■■□□□ 1.17
AC243972.2-201ENST00000541653 EHMT2Q96KQ7 1210 aa22.25■■□□□ 1.15
AC243972.2-201ENST00000541653 KCNA4P22459 653 aa22.16■■□□□ 1.14
AC243972.2-201ENST00000541653 PPP6R1Q9UPN7 881 aa21.99■■□□□ 1.11
AC243972.2-201ENST00000541653 FOXD1Q16676 465 aa21.85■■□□□ 1.09
AC243972.2-201ENST00000541653 SLC4A1APQ9BWU0 796 aaKnown RBP21.36■■□□□ 1.01
AC243972.2-201ENST00000541653 CSRNP3Q8WYN3 585 aa21.29■■□□□ 1
AC243972.2-201ENST00000541653 PPP4R3CPQ6ZMV5 832 aa21.23■□□□□ 0.99
AC243972.2-201ENST00000541653 NCBP3Q53F19 620 aaKnown RBP21.07■□□□□ 0.96
AC243972.2-201ENST00000541653 PIAS4Q8N2W9 510 aaPredicted RBP20.99■□□□□ 0.95
AC243972.2-201ENST00000541653 NPM3O75607 178 aaKnown RBP20.72■□□□□ 0.91
AC243972.2-201ENST00000541653 NISCHQ9Y2I1 1504 aa20.56■□□□□ 0.88
AC243972.2-201ENST00000541653 ZBTB22O15209 634 aa20.38■□□□□ 0.85
AC243972.2-201ENST00000541653 CNKSR2Q8WXI2 1034 aa20.35■□□□□ 0.85
AC243972.2-201ENST00000541653 SCAF1Q9H7N4 1312 aaKnown RBP20.23■□□□□ 0.83
AC243972.2-201ENST00000541653 FOXD4L1Q9NU39 408 aa20.04■□□□□ 0.8
AC243972.2-201ENST00000541653 SLC24A1O60721 1099 aa19.87■□□□□ 0.77
AC243972.2-201ENST00000541653 DNAJC5BQ9UF47 199 aa19.79■□□□□ 0.76
AC243972.2-201ENST00000541653 AMER1Q5JTC6 1135 aaPredicted RBP19.73■□□□□ 0.75
AC243972.2-201ENST00000541653 MSH5O43196 834 aa19.7■□□□□ 0.74
AC243972.2-201ENST00000541653 RTN4Q9NQC3 1192 aaKnown RBP19.7■□□□□ 0.74
AC243972.2-201ENST00000541653 MAPK8IP2Q13387 824 aaPredicted RBP19.66■□□□□ 0.74
AC243972.2-201ENST00000541653 RNF216Q9NWF9 866 aaPredicted RBP19.63■□□□□ 0.73
AC243972.2-201ENST00000541653 FKBP8Q14318 412 aa19.25■□□□□ 0.67
AC243972.2-201ENST00000541653 SLC4A2P04920 1241 aa19.22■□□□□ 0.67
AC243972.2-201ENST00000541653 ATXN8OSP0DMR3 200 aa19.19■□□□□ 0.66
AC243972.2-201ENST00000541653 HOXD11P31277 338 aaPredicted RBP19.18■□□□□ 0.66
AC243972.2-201ENST00000541653 MYCNP04198 464 aaPredicted RBP19.14■□□□□ 0.65
AC243972.2-201ENST00000541653 DMRT2Q9Y5R5 561 aa19.11■□□□□ 0.65
AC243972.2-201ENST00000541653 ATF5Q9Y2D1 282 aaPredicted RBP18.51■□□□□ 0.55
AC243972.2-201ENST00000541653 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.41■□□□□ 0.54
AC243972.2-201ENST00000541653 HNRNPUL2Q1KMD3 747 aaKnown RBP18.41■□□□□ 0.54
AC243972.2-201ENST00000541653 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.41■□□□□ 0.54
AC243972.2-201ENST00000541653 SAMD1Q6SPF0 538 aaPredicted RBP18.4■□□□□ 0.54
AC243972.2-201ENST00000541653 DCAF8L1A6NGE4 600 aa18.39■□□□□ 0.53
AC243972.2-201ENST00000541653 CCDC180Q9P1Z9 1646 aa18.23■□□□□ 0.51
AC243972.2-201ENST00000541653 FBXO3Q9UK99 471 aa18.22■□□□□ 0.51
AC243972.2-201ENST00000541653 U3KPZ7 1027 aaPredicted RBP18.17■□□□□ 0.5
AC243972.2-201ENST00000541653 PLCB2Q00722 1185 aa18.14■□□□□ 0.49
AC243972.2-201ENST00000541653 ZNF219Q9P2Y4 722 aaPredicted RBP18.09■□□□□ 0.49
AC243972.2-201ENST00000541653 SPDYE4A6NLX3 237 aa18.03■□□□□ 0.48
AC243972.2-201ENST00000541653 HAP1P54257 671 aaPredicted RBP17.98■□□□□ 0.47
AC243972.2-201ENST00000541653 DCAF8L2P0C7V8 631 aa17.97■□□□□ 0.47
AC243972.2-201ENST00000541653 APLP2Q06481 763 aa17.95■□□□□ 0.46
AC243972.2-201ENST00000541653 VASPP50552 380 aaPredicted RBP17.91■□□□□ 0.46
AC243972.2-201ENST00000541653 PROM2Q8N271 834 aa17.79■□□□□ 0.44
AC243972.2-201ENST00000541653 BCANQ96GW7 911 aa17.78■□□□□ 0.44
AC243972.2-201ENST00000541653 MKRN4PQ13434 485 aaPredicted RBP17.75■□□□□ 0.43
AC243972.2-201ENST00000541653 IFNLR1Q8IU57 520 aaPredicted RBP17.74■□□□□ 0.43
AC243972.2-201ENST00000541653 FBLN2P98095 1184 aa17.73■□□□□ 0.43
AC243972.2-201ENST00000541653 ABCC9O60706 1549 aa17.7■□□□□ 0.42
AC243972.2-201ENST00000541653 VSIG10Q8N0Z9 540 aa17.64■□□□□ 0.41
AC243972.2-201ENST00000541653 PKD2Q13563 968 aa17.61■□□□□ 0.41
AC243972.2-201ENST00000541653 PRKCSHP14314 528 aaPredicted RBP17.58■□□□□ 0.4
AC243972.2-201ENST00000541653 TAOK2Q9UL54 1235 aa17.54■□□□□ 0.4
AC243972.2-201ENST00000541653 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.5■□□□□ 0.39
AC243972.2-201ENST00000541653 TRHP20396 242 aaPredicted RBP17.48■□□□□ 0.39
AC243972.2-201ENST00000541653 POLA2Q14181 598 aa17.43■□□□□ 0.38
AC243972.2-201ENST00000541653 KLHL34Q8N239 644 aa17.41■□□□□ 0.38
AC243972.2-201ENST00000541653 BBXQ8WY36 941 aaPredicted RBP17.41■□□□□ 0.38
AC243972.2-201ENST00000541653 ECM2O94769 699 aaPredicted RBP17.37■□□□□ 0.37
AC243972.2-201ENST00000541653 SPOCK2Q92563 424 aa17.36■□□□□ 0.37
AC243972.2-201ENST00000541653 PAXIP1Q6ZW49 1069 aaPredicted RBP17.35■□□□□ 0.37
AC243972.2-201ENST00000541653 POTEDQ86YR6 584 aa17.35■□□□□ 0.37
AC243972.2-201ENST00000541653 CFAP44Q96MT7 982 aa17.33■□□□□ 0.36
AC243972.2-201ENST00000541653 SPINK5Q9NQ38 1064 aaPredicted RBP17.32■□□□□ 0.36
AC243972.2-201ENST00000541653 TPRNQ4KMQ1 711 aa17.31■□□□□ 0.36
AC243972.2-201ENST00000541653 KDM2AQ9Y2K7 1162 aa17.3■□□□□ 0.36
AC243972.2-201ENST00000541653 CAPN15O75808 1086 aa17.26■□□□□ 0.35
AC243972.2-201ENST00000541653 ZBTB12Q9Y330 459 aaPredicted RBP17.24■□□□□ 0.35
AC243972.2-201ENST00000541653 NPM1P06748 294 aaKnown RBP eCLIP17.23■□□□□ 0.35
AC243972.2-201ENST00000541653 NACADO15069 1562 aa17.2■□□□□ 0.34
AC243972.2-201ENST00000541653 RB1CC1Q8TDY2 1594 aa17.19■□□□□ 0.34
AC243972.2-201ENST00000541653 MYO15BQ96JP2 1530 aa17.16■□□□□ 0.34
AC243972.2-201ENST00000541653 PLCD3Q8N3E9 789 aa17.14■□□□□ 0.33
AC243972.2-201ENST00000541653 SPRYD3Q8NCJ5 442 aa17.14■□□□□ 0.33
AC243972.2-201ENST00000541653 STAG3Q9UJ98 1225 aa17.13■□□□□ 0.33
AC243972.2-201ENST00000541653 ZCCHC6Q5VYS8 1495 aaKnown RBP17.12■□□□□ 0.33
AC243972.2-201ENST00000541653 RGL2O15211 777 aa17.11■□□□□ 0.33
AC243972.2-201ENST00000541653 DCAF1Q9Y4B6 1507 aa17.09■□□□□ 0.33
AC243972.2-201ENST00000541653 ABCB7O75027 752 aa17.04■□□□□ 0.32
AC243972.2-201ENST00000541653 TSHZ2Q9NRE2 1034 aa17.04■□□□□ 0.32
AC243972.2-201ENST00000541653 ZNF692Q9BU19 519 aaPredicted RBP17.03■□□□□ 0.32
AC243972.2-201ENST00000541653 MIER1Q8N108 512 aa16.99■□□□□ 0.31
AC243972.2-201ENST00000541653 CHGAP10645 457 aaKnown RBP16.97■□□□□ 0.31
AC243972.2-201ENST00000541653 RNF39Q9H2S5 420 aa16.96■□□□□ 0.31
AC243972.2-201ENST00000541653 CIZ1Q9ULV3 898 aaPredicted RBP16.94■□□□□ 0.3
AC243972.2-201ENST00000541653 NBR1Q14596 966 aa16.9■□□□□ 0.3
AC243972.2-201ENST00000541653 PLEKHG5O94827 1062 aa16.86■□□□□ 0.29
AC243972.2-201ENST00000541653 SPDYE2BA6NHP3 402 aa16.85■□□□□ 0.29
AC243972.2-201ENST00000541653 SPDYE6P0CI01 402 aa16.85■□□□□ 0.29
AC243972.2-201ENST00000541653 C1QBPQ07021 282 aaKnown RBP16.85■□□□□ 0.29
AC243972.2-201ENST00000541653 SPDYE2Q495Y8 402 aa16.85■□□□□ 0.29
AC243972.2-201ENST00000541653 PABPN1Q86U42 306 aaKnown RBP eCLIP16.83■□□□□ 0.28
AC243972.2-201ENST00000541653 ZBTB47Q9UFB7 747 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms