RNA–Protein interactions for RNA: ENST00000540849.5

PRICKLE3-205, Transcript of prickle planar cell polarity protein 3, humanhuman

TSL 2

Gene PRICKLE3, Length 2,246 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3-205ENST00000540849 NISCHQ9Y2I1 1504 aa27.48■■□□□ 1.99
PRICKLE3-205ENST00000540849 SHROOM4Q9ULL8 1493 aa23.42■■□□□ 1.34
PRICKLE3-205ENST00000540849 CCDC180Q9P1Z9 1646 aa23.38■■□□□ 1.33
PRICKLE3-205ENST00000540849 ZCCHC6Q5VYS8 1495 aaKnown RBP23.29■■□□□ 1.32
PRICKLE3-205ENST00000540849 SUPT5HO00267 1087 aaKnown RBP22.97■■□□□ 1.27
PRICKLE3-205ENST00000540849 DCAF8L2P0C7V8 631 aa22.57■■□□□ 1.2
PRICKLE3-205ENST00000540849 DCAF1Q9Y4B6 1507 aa22.57■■□□□ 1.2
PRICKLE3-205ENST00000540849 MYO15BQ96JP2 1530 aa22.47■■□□□ 1.19
PRICKLE3-205ENST00000540849 CHIC1Q5VXU3 224 aa22.43■■□□□ 1.18
PRICKLE3-205ENST00000540849 ABCC9O60706 1549 aa22.03■■□□□ 1.12
PRICKLE3-205ENST00000540849 HRCP23327 699 aa21.93■■□□□ 1.1
PRICKLE3-205ENST00000540849 SCRIBQ14160 1630 aa21.89■■□□□ 1.1
PRICKLE3-205ENST00000540849 PCGF6Q9BYE7 350 aa21.8■■□□□ 1.08
PRICKLE3-205ENST00000540849 RSF1Q96T23 1441 aaPredicted RBP21.76■■□□□ 1.07
PRICKLE3-205ENST00000540849 LOC105371045A0A1W2PR82 267 aa21.74■■□□□ 1.07
PRICKLE3-205ENST00000540849 RB1CC1Q8TDY2 1594 aa21.61■■□□□ 1.05
PRICKLE3-205ENST00000540849 NACADO15069 1562 aa21.53■■□□□ 1.04
PRICKLE3-205ENST00000540849 PPARGC1BQ86YN6 1023 aaKnown RBP21.45■■□□□ 1.02
PRICKLE3-205ENST00000540849 CECR2Q9BXF3 1484 aa21.41■■□□□ 1.02
PRICKLE3-205ENST00000540849 TRIM41Q8WV44 630 aa21.39■■□□□ 1.01
PRICKLE3-205ENST00000540849 TRIM26Q12899 539 aaPredicted RBP21.39■■□□□ 1.01
PRICKLE3-205ENST00000540849 MROH2BQ7Z745 1585 aa21.37■■□□□ 1.01
PRICKLE3-205ENST00000540849 WIZO95785 1651 aa21.29■■□□□ 1
PRICKLE3-205ENST00000540849 FAM9AQ8IZU1 332 aaPredicted RBP21.22■□□□□ 0.99
PRICKLE3-205ENST00000540849 BAZ1AQ9NRL2 1556 aaPredicted RBP21.19■□□□□ 0.98
PRICKLE3-205ENST00000540849 EIF4G1Q04637 1599 aaKnown RBP21.12■□□□□ 0.97
PRICKLE3-205ENST00000540849 EHMT2Q96KQ7 1210 aa21.02■□□□□ 0.96
PRICKLE3-205ENST00000540849 ZEB1P37275 1124 aaPredicted RBP20.96■□□□□ 0.95
PRICKLE3-205ENST00000540849 TOP2AP11388 1531 aaKnown RBP20.96■□□□□ 0.95
PRICKLE3-205ENST00000540849 SMARCA4P51532 1647 aa20.94■□□□□ 0.94
PRICKLE3-205ENST00000540849 UNC13AQ9UPW8 1703 aa20.93■□□□□ 0.94
PRICKLE3-205ENST00000540849 SMARCA2P51531 1590 aa20.85■□□□□ 0.93
PRICKLE3-205ENST00000540849 CCDC88BA6NC98 1476 aa20.83■□□□□ 0.92
PRICKLE3-205ENST00000540849 ABCC8Q09428 1581 aa20.83■□□□□ 0.92
PRICKLE3-205ENST00000540849 BICRAQ9NZM4 1560 aa20.62■□□□□ 0.89
PRICKLE3-205ENST00000540849 SOGA1O94964 1423 aa20.62■□□□□ 0.89
PRICKLE3-205ENST00000540849 WRNQ14191 1432 aaPredicted RBP eCLIP20.61■□□□□ 0.89
PRICKLE3-205ENST00000540849 CEP162Q5TB80 1403 aa20.58■□□□□ 0.89
PRICKLE3-205ENST00000540849 EEA1Q15075 1411 aa20.54■□□□□ 0.88
PRICKLE3-205ENST00000540849 PEG3Q9GZU2 1588 aa20.53■□□□□ 0.88
PRICKLE3-205ENST00000540849 TNIKQ9UKE5 1360 aa20.53■□□□□ 0.88
PRICKLE3-205ENST00000540849 RUSC2Q8N2Y8 1516 aa20.52■□□□□ 0.88
PRICKLE3-205ENST00000540849 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.5■□□□□ 0.87
PRICKLE3-205ENST00000540849 PABPN1Q86U42 306 aaKnown RBP eCLIP20.5■□□□□ 0.87
PRICKLE3-205ENST00000540849 CSRNP3Q8WYN3 585 aa20.45■□□□□ 0.86
PRICKLE3-205ENST00000540849 CCER1Q8TC90 406 aaPredicted RBP20.44■□□□□ 0.86
PRICKLE3-205ENST00000540849 GOLGA3Q08378 1498 aa20.42■□□□□ 0.86
PRICKLE3-205ENST00000540849 SYNJ1O43426 1573 aa20.39■□□□□ 0.86
PRICKLE3-205ENST00000540849 TTBK1Q5TCY1 1321 aaPredicted RBP20.39■□□□□ 0.85
PRICKLE3-205ENST00000540849 UBTFP17480 764 aaKnown RBP20.35■□□□□ 0.85
PRICKLE3-205ENST00000540849 ATAD2BQ9ULI0 1458 aa20.33■□□□□ 0.84
PRICKLE3-205ENST00000540849 KIF21BO75037 1637 aa20.32■□□□□ 0.84
PRICKLE3-205ENST00000540849 CEP164Q9UPV0 1460 aa20.28■□□□□ 0.84
PRICKLE3-205ENST00000540849 BAZ1BQ9UIG0 1483 aaKnown RBP20.28■□□□□ 0.84
PRICKLE3-205ENST00000540849 SCAF1Q9H7N4 1312 aaKnown RBP20.27■□□□□ 0.84
PRICKLE3-205ENST00000540849 CLIP1P30622 1438 aa20.17■□□□□ 0.82
PRICKLE3-205ENST00000540849 RAPGEF2Q9Y4G8 1499 aa20.13■□□□□ 0.81
PRICKLE3-205ENST00000540849 TOP2BQ02880 1626 aa20.12■□□□□ 0.81
PRICKLE3-205ENST00000540849 VPS8Q8N3P4 1428 aa20.11■□□□□ 0.81
PRICKLE3-205ENST00000540849 DIEXFQ68CQ4 756 aaKnown RBP20.1■□□□□ 0.81
PRICKLE3-205ENST00000540849 BIVM-ERCC5R4GMW8 1640 aa20.08■□□□□ 0.8
PRICKLE3-205ENST00000540849 ACIN1Q9UKV3 1341 aaKnown RBP20.03■□□□□ 0.8
PRICKLE3-205ENST00000540849 NEUROD1Q13562 356 aa20■□□□□ 0.79
PRICKLE3-205ENST00000540849 HNRNPUL2Q1KMD3 747 aaKnown RBP19.98■□□□□ 0.79
PRICKLE3-205ENST00000540849 HMGXB3Q12766 1538 aa19.96■□□□□ 0.79
PRICKLE3-205ENST00000540849 ERICH3Q5RHP9 1530 aa19.95■□□□□ 0.78
PRICKLE3-205ENST00000540849 ZNF316A6NFI3 1004 aaPredicted RBP19.95■□□□□ 0.78
PRICKLE3-205ENST00000540849 PRXQ9BXM0 1461 aa19.93■□□□□ 0.78
PRICKLE3-205ENST00000540849 PELP1Q8IZL8 1130 aaKnown RBP19.91■□□□□ 0.78
PRICKLE3-205ENST00000540849 RANGAP1P46060 587 aaPredicted RBP19.91■□□□□ 0.78
PRICKLE3-205ENST00000540849 APLP2Q06481 763 aa19.91■□□□□ 0.78
PRICKLE3-205ENST00000540849 NCAPD3P42695 1498 aa19.9■□□□□ 0.78
PRICKLE3-205ENST00000540849 CUX1P39880 1505 aa19.9■□□□□ 0.78
PRICKLE3-205ENST00000540849 ARAP1Q96P48 1450 aa19.89■□□□□ 0.77
PRICKLE3-205ENST00000540849 CENPBP07199 599 aaPredicted RBP19.87■□□□□ 0.77
PRICKLE3-205ENST00000540849 CFTRP13569 1480 aa19.78■□□□□ 0.76
PRICKLE3-205ENST00000540849 GTF3C3Q9Y5Q9 886 aa19.78■□□□□ 0.76
PRICKLE3-205ENST00000540849 KIF27Q86VH2 1401 aa19.78■□□□□ 0.76
PRICKLE3-205ENST00000540849 PRDM2Q13029 1718 aa19.73■□□□□ 0.75
PRICKLE3-205ENST00000540849 DNAJC5BQ9UF47 199 aa19.72■□□□□ 0.75
PRICKLE3-205ENST00000540849 KANK4Q5T7N3 995 aaPredicted RBP19.71■□□□□ 0.75
PRICKLE3-205ENST00000540849 DHX57Q6P158 1386 aaKnown RBP19.68■□□□□ 0.74
PRICKLE3-205ENST00000540849 MIER1Q8N108 512 aa19.68■□□□□ 0.74
PRICKLE3-205ENST00000540849 ARHGAP35Q9NRY4 1499 aa19.67■□□□□ 0.74
PRICKLE3-205ENST00000540849 RRBP1Q9P2E9 1410 aaKnown RBP19.66■□□□□ 0.74
PRICKLE3-205ENST00000540849 CLSPNQ9HAW4 1339 aa19.63■□□□□ 0.73
PRICKLE3-205ENST00000540849 YTHDC1Q96MU7 727 aaKnown RBP19.63■□□□□ 0.73
PRICKLE3-205ENST00000540849 CUX2O14529 1486 aa19.59■□□□□ 0.73
PRICKLE3-205ENST00000540849 IGF1RP08069 1367 aa19.54■□□□□ 0.72
PRICKLE3-205ENST00000540849 CCNB3Q8WWL7 1395 aa19.54■□□□□ 0.72
PRICKLE3-205ENST00000540849 FGD5Q6ZNL6 1462 aa19.51■□□□□ 0.71
PRICKLE3-205ENST00000540849 CADPSQ9ULU8 1353 aa19.51■□□□□ 0.71
PRICKLE3-205ENST00000540849 TIAM1Q13009 1591 aa19.5■□□□□ 0.71
PRICKLE3-205ENST00000540849 MAP3K1Q13233 1512 aa19.47■□□□□ 0.71
PRICKLE3-205ENST00000540849 CARMIL1Q5VZK9 1371 aa19.45■□□□□ 0.7
PRICKLE3-205ENST00000540849 CFAP43Q8NDM7 1665 aa19.4■□□□□ 0.7
PRICKLE3-205ENST00000540849 LRRC9Q6ZRR7 1453 aa19.39■□□□□ 0.69
PRICKLE3-205ENST00000540849 ITGAEP38570 1179 aa19.39■□□□□ 0.69
PRICKLE3-205ENST00000540849 RAB3GAP2Q9H2M9 1393 aa19.38■□□□□ 0.69
PRICKLE3-205ENST00000540849 MAPKBP1O60336 1514 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms