RNA–Protein interactions for RNA: ENST00000533690.5

ATM-221, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 3,354 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-221ENST00000533690 NISCHQ9Y2I1 1504 aa9.04□□□□□ -0.96
ATM-221ENST00000533690 AEBP2Q6ZN18 517 aaPredicted RBP8.7□□□□□ -1.02
ATM-221ENST00000533690 CHIC1Q5VXU3 224 aa8.41□□□□□ -1.06
ATM-221ENST00000533690 CCDC180Q9P1Z9 1646 aa8.04□□□□□ -1.12
ATM-221ENST00000533690 ZCCHC6Q5VYS8 1495 aaKnown RBP7.78□□□□□ -1.16
ATM-221ENST00000533690 DCAF1Q9Y4B6 1507 aa7.77□□□□□ -1.17
ATM-221ENST00000533690 MYO15BQ96JP2 1530 aa7.59□□□□□ -1.19
ATM-221ENST00000533690 PHF23Q9BUL5 403 aaPredicted RBP7.48□□□□□ -1.21
ATM-221ENST00000533690 ABCC9O60706 1549 aa7.41□□□□□ -1.22
ATM-221ENST00000533690 EIF4G1Q04637 1599 aaKnown RBP7.35□□□□□ -1.23
ATM-221ENST00000533690 SENP3Q9H4L4 574 aaPredicted RBP7.25□□□□□ -1.25
ATM-221ENST00000533690 UNC13AQ9UPW8 1703 aa7.17□□□□□ -1.26
ATM-221ENST00000533690 NACADO15069 1562 aa7.16□□□□□ -1.26
ATM-221ENST00000533690 RB1CC1Q8TDY2 1594 aa7.13□□□□□ -1.27
ATM-221ENST00000533690 BAZ1AQ9NRL2 1556 aaPredicted RBP7.1□□□□□ -1.27
ATM-221ENST00000533690 PEG3Q9GZU2 1588 aa7.09□□□□□ -1.27
ATM-221ENST00000533690 RSF1Q96T23 1441 aaPredicted RBP7.02□□□□□ -1.29
ATM-221ENST00000533690 SCRIBQ14160 1630 aa6.98□□□□□ -1.29
ATM-221ENST00000533690 SHROOM4Q9ULL8 1493 aa6.95□□□□□ -1.3
ATM-221ENST00000533690 BICRAQ9NZM4 1560 aa6.95□□□□□ -1.3
ATM-221ENST00000533690 TOP2AP11388 1531 aaKnown RBP6.95□□□□□ -1.3
ATM-221ENST00000533690 SMARCA4P51532 1647 aa6.94□□□□□ -1.3
ATM-221ENST00000533690 WIZO95785 1651 aa6.94□□□□□ -1.3
ATM-221ENST00000533690 MROH2BQ7Z745 1585 aa6.93□□□□□ -1.3
ATM-221ENST00000533690 SMARCA2P51531 1590 aa6.91□□□□□ -1.3
ATM-221ENST00000533690 PRDM2Q13029 1718 aa6.89□□□□□ -1.31
ATM-221ENST00000533690 CECR2Q9BXF3 1484 aa6.84□□□□□ -1.31
ATM-221ENST00000533690 BIVM-ERCC5R4GMW8 1640 aa6.82□□□□□ -1.32
ATM-221ENST00000533690 FOXD1Q16676 465 aa6.82□□□□□ -1.32
ATM-221ENST00000533690 WRNQ14191 1432 aaPredicted RBP eCLIP6.8□□□□□ -1.32
ATM-221ENST00000533690 PLPPR3Q6T4P5 718 aa6.8□□□□□ -1.32
ATM-221ENST00000533690 KIF21BO75037 1637 aa6.79□□□□□ -1.32
ATM-221ENST00000533690 HRCP23327 699 aa6.74□□□□□ -1.33
ATM-221ENST00000533690 HMGXB3Q12766 1538 aa6.71□□□□□ -1.33
ATM-221ENST00000533690 CCDC88BA6NC98 1476 aa6.71□□□□□ -1.34
ATM-221ENST00000533690 TOP2BQ02880 1626 aa6.7□□□□□ -1.34
ATM-221ENST00000533690 SYNJ1O43426 1573 aa6.69□□□□□ -1.34
ATM-221ENST00000533690 EEA1Q15075 1411 aa6.65□□□□□ -1.34
ATM-221ENST00000533690 WDR97A6NE52 1622 aa6.64□□□□□ -1.35
ATM-221ENST00000533690 ERICH3Q5RHP9 1530 aa6.64□□□□□ -1.35
ATM-221ENST00000533690 BAZ1BQ9UIG0 1483 aaKnown RBP6.64□□□□□ -1.35
ATM-221ENST00000533690 PPP6R1Q9UPN7 881 aa6.62□□□□□ -1.35
ATM-221ENST00000533690 ABCC8Q09428 1581 aa6.61□□□□□ -1.35
ATM-221ENST00000533690 SLC24A1O60721 1099 aa6.61□□□□□ -1.35
ATM-221ENST00000533690 SUPT5HO00267 1087 aaKnown RBP6.6□□□□□ -1.35
ATM-221ENST00000533690 CUX2O14529 1486 aa6.59□□□□□ -1.35
ATM-221ENST00000533690 ATAD2BQ9ULI0 1458 aa6.59□□□□□ -1.35
ATM-221ENST00000533690 ADRA2BP18089 450 aa6.58□□□□□ -1.36
ATM-221ENST00000533690 CFAP43Q8NDM7 1665 aa6.56□□□□□ -1.36
ATM-221ENST00000533690 TNIKQ9UKE5 1360 aa6.55□□□□□ -1.36
ATM-221ENST00000533690 NCAPD3P42695 1498 aa6.54□□□□□ -1.36
ATM-221ENST00000533690 MAP3K1Q13233 1512 aa6.54□□□□□ -1.36
ATM-221ENST00000533690 PRXQ9BXM0 1461 aa6.53□□□□□ -1.36
ATM-221ENST00000533690 CUX1P39880 1505 aa6.5□□□□□ -1.37
ATM-221ENST00000533690 KIF21AQ7Z4S6 1674 aa6.5□□□□□ -1.37
ATM-221ENST00000533690 TRIM26Q12899 539 aaPredicted RBP6.5□□□□□ -1.37
ATM-221ENST00000533690 GOLGA3Q08378 1498 aa6.49□□□□□ -1.37
ATM-221ENST00000533690 RUSC2Q8N2Y8 1516 aa6.49□□□□□ -1.37
ATM-221ENST00000533690 LRRIQ1Q96JM4 1722 aa6.49□□□□□ -1.37
ATM-221ENST00000533690 CFTRP13569 1480 aa6.49□□□□□ -1.37
ATM-221ENST00000533690 CEP164Q9UPV0 1460 aa6.47□□□□□ -1.37
ATM-221ENST00000533690 SOGA1O94964 1423 aa6.47□□□□□ -1.37
ATM-221ENST00000533690 CEP162Q5TB80 1403 aa6.47□□□□□ -1.37
ATM-221ENST00000533690 ARAP1Q96P48 1450 aa6.47□□□□□ -1.37
ATM-221ENST00000533690 CTTNBP2Q8WZ74 1663 aa6.45□□□□□ -1.38
ATM-221ENST00000533690 CC2D2AQ9P2K1 1620 aa6.45□□□□□ -1.38
ATM-221ENST00000533690 ABCA5Q8WWZ7 1642 aa6.44□□□□□ -1.38
ATM-221ENST00000533690 SAMD9Q5K651 1589 aa6.43□□□□□ -1.38
ATM-221ENST00000533690 LOC105371045A0A1W2PR82 267 aa6.43□□□□□ -1.38
ATM-221ENST00000533690 CUL7Q14999 1698 aa6.42□□□□□ -1.38
ATM-221ENST00000533690 RRBP1Q9P2E9 1410 aaKnown RBP6.41□□□□□ -1.38
ATM-221ENST00000533690 VPS8Q8N3P4 1428 aa6.41□□□□□ -1.38
ATM-221ENST00000533690 ARHGEF11O15085 1522 aa6.4□□□□□ -1.39
ATM-221ENST00000533690 PIAS4Q8N2W9 510 aaPredicted RBP6.39□□□□□ -1.39
ATM-221ENST00000533690 THOC2Q8NI27 1593 aaKnown RBP6.39□□□□□ -1.39
ATM-221ENST00000533690 RAPGEF2Q9Y4G8 1499 aa6.38□□□□□ -1.39
ATM-221ENST00000533690 AQRO60306 1485 aaKnown RBP eCLIP6.37□□□□□ -1.39
ATM-221ENST00000533690 CLIP1P30622 1438 aa6.37□□□□□ -1.39
ATM-221ENST00000533690 ZEB1P37275 1124 aaPredicted RBP6.37□□□□□ -1.39
ATM-221ENST00000533690 TIAM1Q13009 1591 aa6.36□□□□□ -1.39
ATM-221ENST00000533690 DNMBPQ6XZF7 1577 aa6.36□□□□□ -1.39
ATM-221ENST00000533690 KDM5BQ9UGL1 1544 aa6.35□□□□□ -1.39
ATM-221ENST00000533690 POLR1AO95602 1720 aaPredicted RBP6.35□□□□□ -1.39
ATM-221ENST00000533690 TARBP1Q13395 1621 aaKnown RBP6.35□□□□□ -1.39
ATM-221ENST00000533690 EFCAB5A4FU69 1503 aa6.34□□□□□ -1.39
ATM-221ENST00000533690 MAPKBP1O60336 1514 aa6.34□□□□□ -1.39
ATM-221ENST00000533690 ABCA10Q8WWZ4 1543 aa6.34□□□□□ -1.4
ATM-221ENST00000533690 ARHGAP35Q9NRY4 1499 aa6.34□□□□□ -1.4
ATM-221ENST00000533690 GCC2Q8IWJ2 1684 aa6.33□□□□□ -1.4
ATM-221ENST00000533690 PCGF6Q9BYE7 350 aa6.33□□□□□ -1.4
ATM-221ENST00000533690 PPARGC1BQ86YN6 1023 aaKnown RBP6.32□□□□□ -1.4
ATM-221ENST00000533690 SNAPC4Q5SXM2 1469 aa6.32□□□□□ -1.4
ATM-221ENST00000533690 LAMC3Q9Y6N6 1575 aa6.31□□□□□ -1.4
ATM-221ENST00000533690 PBRM1Q86U86 1689 aa6.31□□□□□ -1.4
ATM-221ENST00000533690 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.31□□□□□ -1.4
ATM-221ENST00000533690 TRIM41Q8WV44 630 aa6.31□□□□□ -1.4
ATM-221ENST00000533690 PCF11O94913 1555 aaKnown RBP6.3□□□□□ -1.4
ATM-221ENST00000533690 ADCY10Q96PN6 1610 aa6.28□□□□□ -1.4
ATM-221ENST00000533690 KCNA4P22459 653 aa6.27□□□□□ -1.41
ATM-221ENST00000533690 HECW1Q76N89 1606 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms