RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 DCAF8L2P0C7V8 631 aa25.3■■□□□ 1.64
LRRK1-207ENST00000531270 EHMT2Q96KQ7 1210 aa23.75■■□□□ 1.39
LRRK1-207ENST00000531270 SUPT5HO00267 1087 aaKnown RBP23.73■■□□□ 1.39
LRRK1-207ENST00000531270 PELP1Q8IZL8 1130 aaKnown RBP23.56■■□□□ 1.36
LRRK1-207ENST00000531270 APLP2Q06481 763 aa23.04■■□□□ 1.28
LRRK1-207ENST00000531270 SHROOM4Q9ULL8 1493 aa23.04■■□□□ 1.28
LRRK1-207ENST00000531270 TTBK1Q5TCY1 1321 aaPredicted RBP22.93■■□□□ 1.26
LRRK1-207ENST00000531270 ERICH6Q7L0X2 663 aa22.9■■□□□ 1.26
LRRK1-207ENST00000531270 FAM9AQ8IZU1 332 aaPredicted RBP22.71■■□□□ 1.23
LRRK1-207ENST00000531270 RANGAP1P46060 587 aaPredicted RBP22.6■■□□□ 1.21
LRRK1-207ENST00000531270 CCER1Q8TC90 406 aaPredicted RBP22.54■■□□□ 1.2
LRRK1-207ENST00000531270 PCGF6Q9BYE7 350 aa22.49■■□□□ 1.19
LRRK1-207ENST00000531270 ATP1B4Q9UN42 357 aaPredicted RBP22.45■■□□□ 1.18
LRRK1-207ENST00000531270 CENPBP07199 599 aaPredicted RBP22.29■■□□□ 1.16
LRRK1-207ENST00000531270 YTHDC1Q96MU7 727 aaKnown RBP22.12■■□□□ 1.13
LRRK1-207ENST00000531270 NEFLP07196 543 aa22.11■■□□□ 1.13
LRRK1-207ENST00000531270 MYT1Q01538 1121 aa22.11■■□□□ 1.13
LRRK1-207ENST00000531270 UBTFP17480 764 aaKnown RBP21.83■■□□□ 1.09
LRRK1-207ENST00000531270 DAXXQ9UER7 740 aaPredicted RBP21.81■■□□□ 1.08
LRRK1-207ENST00000531270 ZEB1P37275 1124 aaPredicted RBP21.81■■□□□ 1.08
LRRK1-207ENST00000531270 MYT1LQ9UL68 1186 aa21.79■■□□□ 1.08
LRRK1-207ENST00000531270 POLR3GLQ9BT43 218 aa21.77■■□□□ 1.08
LRRK1-207ENST00000531270 TRIM41Q8WV44 630 aa21.76■■□□□ 1.07
LRRK1-207ENST00000531270 PPARGC1BQ86YN6 1023 aaKnown RBP21.67■■□□□ 1.06
LRRK1-207ENST00000531270 CNGB1Q14028 1251 aaPredicted RBP21.66■■□□□ 1.06
LRRK1-207ENST00000531270 CHIC1Q5VXU3 224 aa21.62■■□□□ 1.05
LRRK1-207ENST00000531270 NISCHQ9Y2I1 1504 aa21.55■■□□□ 1.04
LRRK1-207ENST00000531270 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.51■■□□□ 1.03
LRRK1-207ENST00000531270 HNRNPUL2Q1KMD3 747 aaKnown RBP21.51■■□□□ 1.03
LRRK1-207ENST00000531270 ITGAEP38570 1179 aa21.49■■□□□ 1.03
LRRK1-207ENST00000531270 SLC4A1APQ9BWU0 796 aaKnown RBP21.48■■□□□ 1.03
LRRK1-207ENST00000531270 CLSPNQ9HAW4 1339 aa21.27■■□□□ 1
LRRK1-207ENST00000531270 ZNF316A6NFI3 1004 aaPredicted RBP21.26■□□□□ 0.99
LRRK1-207ENST00000531270 RTL5Q5HYW3 569 aaPredicted RBP21.12■□□□□ 0.97
LRRK1-207ENST00000531270 BCL11AQ9H165 835 aa20.97■□□□□ 0.95
LRRK1-207ENST00000531270 TRIM26Q12899 539 aaPredicted RBP20.94■□□□□ 0.94
LRRK1-207ENST00000531270 HRCP23327 699 aa20.92■□□□□ 0.94
LRRK1-207ENST00000531270 SLC24A1O60721 1099 aa20.9■□□□□ 0.94
LRRK1-207ENST00000531270 ZBTB47Q9UFB7 747 aaPredicted RBP20.8■□□□□ 0.92
LRRK1-207ENST00000531270 BCANQ96GW7 911 aa20.77■□□□□ 0.92
LRRK1-207ENST00000531270 TRIM52Q96A61 297 aa20.74■□□□□ 0.91
LRRK1-207ENST00000531270 FAM50AQ14320 339 aaKnown RBP20.71■□□□□ 0.91
LRRK1-207ENST00000531270 ZNF326Q5BKZ1 582 aaKnown RBP20.68■□□□□ 0.9
LRRK1-207ENST00000531270 LOC105371045A0A1W2PR82 267 aa20.66■□□□□ 0.9
LRRK1-207ENST00000531270 NEUROD1Q13562 356 aa20.65■□□□□ 0.9
LRRK1-207ENST00000531270 CANXP27824 592 aaKnown RBP20.6■□□□□ 0.89
LRRK1-207ENST00000531270 DIEXFQ68CQ4 756 aaKnown RBP20.57■□□□□ 0.88
LRRK1-207ENST00000531270 CDK11AQ9UQ88 783 aaPredicted RBP20.47■□□□□ 0.87
LRRK1-207ENST00000531270 NEFMP07197 916 aa20.41■□□□□ 0.86
LRRK1-207ENST00000531270 ANP32CO43423 234 aa20.39■□□□□ 0.85
LRRK1-207ENST00000531270 FBLN2P98095 1184 aa20.34■□□□□ 0.85
LRRK1-207ENST00000531270 NPM2Q86SE8 214 aaKnown RBP20.34■□□□□ 0.85
LRRK1-207ENST00000531270 PLPPR3Q6T4P5 718 aa20.28■□□□□ 0.84
LRRK1-207ENST00000531270 GTF3C3Q9Y5Q9 886 aa20.27■□□□□ 0.84
LRRK1-207ENST00000531270 ARID3CA6NKF2 412 aa20.23■□□□□ 0.83
LRRK1-207ENST00000531270 EIF5BO60841 1220 aaKnown RBP20.23■□□□□ 0.83
LRRK1-207ENST00000531270 ANP32AP39687 249 aaKnown RBP20.19■□□□□ 0.82
LRRK1-207ENST00000531270 HSP90AA1P07900 732 aaKnown RBP20.17■□□□□ 0.82
LRRK1-207ENST00000531270 ANP32BQ92688 251 aaKnown RBP20.16■□□□□ 0.82
LRRK1-207ENST00000531270 ZNF777Q9ULD5 760 aaPredicted RBP20.06■□□□□ 0.8
LRRK1-207ENST00000531270 ESF1Q9H501 851 aaKnown RBP20.05■□□□□ 0.8
LRRK1-207ENST00000531270 CHGAP10645 457 aaKnown RBP20.03■□□□□ 0.8
LRRK1-207ENST00000531270 ARXQ96QS3 562 aa20.02■□□□□ 0.79
LRRK1-207ENST00000531270 P3H3Q8IVL6 736 aa20.01■□□□□ 0.79
LRRK1-207ENST00000531270 STAG3Q9UJ98 1225 aa20.01■□□□□ 0.79
LRRK1-207ENST00000531270 A0A0G2JS52 829 aa19.97■□□□□ 0.79
LRRK1-207ENST00000531270 PABPN1Q86U42 306 aaKnown RBP eCLIP19.96■□□□□ 0.79
LRRK1-207ENST00000531270 SALL2Q9Y467 1007 aaPredicted RBP19.95■□□□□ 0.78
LRRK1-207ENST00000531270 SCAF1Q9H7N4 1312 aaKnown RBP19.94■□□□□ 0.78
LRRK1-207ENST00000531270 UPF2Q9HAU5 1272 aaKnown RBP19.92■□□□□ 0.78
LRRK1-207ENST00000531270 CDK11BP21127 795 aaKnown RBP19.89■□□□□ 0.77
LRRK1-207ENST00000531270 PLEKHG5O94827 1062 aa19.85■□□□□ 0.77
LRRK1-207ENST00000531270 FKBP8Q14318 412 aa19.83■□□□□ 0.76
LRRK1-207ENST00000531270 NBR1Q14596 966 aa19.8■□□□□ 0.76
LRRK1-207ENST00000531270 FAM9BQ8IZU0 186 aa19.8■□□□□ 0.76
LRRK1-207ENST00000531270 ZBTB7CA1YPR0 619 aa19.78■□□□□ 0.76
LRRK1-207ENST00000531270 GLIPR1L2Q4G1C9 344 aa19.76■□□□□ 0.75
LRRK1-207ENST00000531270 HNRNPUQ00839 825 aaKnown RBP eCLIP19.73■□□□□ 0.75
LRRK1-207ENST00000531270 TULP1O00294 542 aaPredicted RBP19.72■□□□□ 0.75
LRRK1-207ENST00000531270 SENP3Q9H4L4 574 aaPredicted RBP19.72■□□□□ 0.75
LRRK1-207ENST00000531270 ACIN1Q9UKV3 1341 aaKnown RBP19.67■□□□□ 0.74
LRRK1-207ENST00000531270 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.67■□□□□ 0.74
LRRK1-207ENST00000531270 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.66■□□□□ 0.74
LRRK1-207ENST00000531270 CCDC136Q96JN2 1154 aa19.62■□□□□ 0.73
LRRK1-207ENST00000531270 C14orf37Q86TY3 774 aa19.61■□□□□ 0.73
LRRK1-207ENST00000531270 WDR43Q15061 677 aaKnown RBP eCLIP19.6■□□□□ 0.73
LRRK1-207ENST00000531270 TONSLQ96HA7 1378 aa19.58■□□□□ 0.73
LRRK1-207ENST00000531270 TPRNQ4KMQ1 711 aa19.58■□□□□ 0.73
LRRK1-207ENST00000531270 DDX10Q13206 875 aaKnown RBP19.58■□□□□ 0.72
LRRK1-207ENST00000531270 TMC1Q8TDI8 760 aa19.57■□□□□ 0.72
LRRK1-207ENST00000531270 MYH16Q9H6N6 1097 aa19.57■□□□□ 0.72
LRRK1-207ENST00000531270 NPM1P06748 294 aaKnown RBP eCLIP19.57■□□□□ 0.72
LRRK1-207ENST00000531270 KDM2AQ9Y2K7 1162 aa19.54■□□□□ 0.72
LRRK1-207ENST00000531270 IRX6P78412 446 aaPredicted RBP19.52■□□□□ 0.72
LRRK1-207ENST00000531270 CHIC2Q9UKJ5 165 aa19.5■□□□□ 0.71
LRRK1-207ENST00000531270 NCLP19338 710 aaKnown RBP19.48■□□□□ 0.71
LRRK1-207ENST00000531270 TAOK2Q9UL54 1235 aa19.48■□□□□ 0.71
LRRK1-207ENST00000531270 ABCC9O60706 1549 aa19.45■□□□□ 0.7
LRRK1-207ENST00000531270 HAP1P54257 671 aaPredicted RBP19.43■□□□□ 0.7
LRRK1-207ENST00000531270 NCBP3Q53F19 620 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms