RNA–Protein interactions for RNA: ENST00000524453.1

AP003501.1-201, humanhuman

TSL 3 BASIC

Gene AP003501.1, Length 744 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003501.1-201ENST00000524453 CHIC1Q5VXU3 224 aa23.57■■□□□ 1.36
AP003501.1-201ENST00000524453 AEBP2Q6ZN18 517 aaPredicted RBP23.5■■□□□ 1.35
AP003501.1-201ENST00000524453 PHF23Q9BUL5 403 aaPredicted RBP20.83■□□□□ 0.93
AP003501.1-201ENST00000524453 SENP3Q9H4L4 574 aaPredicted RBP19.76■□□□□ 0.75
AP003501.1-201ENST00000524453 PLPPR3Q6T4P5 718 aa19.39■□□□□ 0.69
AP003501.1-201ENST00000524453 FOXD1Q16676 465 aa18.29■□□□□ 0.52
AP003501.1-201ENST00000524453 ADRA2BP18089 450 aa18.17■□□□□ 0.5
AP003501.1-201ENST00000524453 PPP6R1Q9UPN7 881 aa18.14■□□□□ 0.49
AP003501.1-201ENST00000524453 KCNA4P22459 653 aa17.55■□□□□ 0.4
AP003501.1-201ENST00000524453 PIAS4Q8N2W9 510 aaPredicted RBP17.36■□□□□ 0.37
AP003501.1-201ENST00000524453 PPP4R3CPQ6ZMV5 832 aa17.18■□□□□ 0.34
AP003501.1-201ENST00000524453 EHMT2Q96KQ7 1210 aa17.04■□□□□ 0.32
AP003501.1-201ENST00000524453 NCBP3Q53F19 620 aaKnown RBP16.87■□□□□ 0.29
AP003501.1-201ENST00000524453 SLC4A1APQ9BWU0 796 aaKnown RBP16.79■□□□□ 0.28
AP003501.1-201ENST00000524453 NPM3O75607 178 aaKnown RBP16.7■□□□□ 0.26
AP003501.1-201ENST00000524453 CSRNP3Q8WYN3 585 aa16.64■□□□□ 0.25
AP003501.1-201ENST00000524453 MSH5O43196 834 aa16.57■□□□□ 0.24
AP003501.1-201ENST00000524453 CNKSR2Q8WXI2 1034 aa16.55■□□□□ 0.24
AP003501.1-201ENST00000524453 SCAF1Q9H7N4 1312 aaKnown RBP16.51■□□□□ 0.23
AP003501.1-201ENST00000524453 MAPK8IP2Q13387 824 aaPredicted RBP16.24■□□□□ 0.19
AP003501.1-201ENST00000524453 DNAJC5BQ9UF47 199 aa16.24■□□□□ 0.19
AP003501.1-201ENST00000524453 ZBTB22O15209 634 aa16.22■□□□□ 0.19
AP003501.1-201ENST00000524453 RNF216Q9NWF9 866 aaPredicted RBP16.09■□□□□ 0.17
AP003501.1-201ENST00000524453 FOXD4L1Q9NU39 408 aa15.95■□□□□ 0.14
AP003501.1-201ENST00000524453 POTEDQ86YR6 584 aa15.94■□□□□ 0.14
AP003501.1-201ENST00000524453 DMRT2Q9Y5R5 561 aa15.92■□□□□ 0.14
AP003501.1-201ENST00000524453 HOXD11P31277 338 aaPredicted RBP15.88■□□□□ 0.13
AP003501.1-201ENST00000524453 SLC4A2P04920 1241 aa15.64■□□□□ 0.09
AP003501.1-201ENST00000524453 MYCNP04198 464 aaPredicted RBP15.39■□□□□ 0.05
AP003501.1-201ENST00000524453 ATXN8OSP0DMR3 200 aa15.36■□□□□ 0.05
AP003501.1-201ENST00000524453 DCAF8L1A6NGE4 600 aa15.03■□□□□ -0
AP003501.1-201ENST00000524453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15□□□□□ -0.01
AP003501.1-201ENST00000524453 ATF5Q9Y2D1 282 aaPredicted RBP14.97□□□□□ -0.01
AP003501.1-201ENST00000524453 U3KPZ7 1027 aaPredicted RBP14.94□□□□□ -0.02
AP003501.1-201ENST00000524453 FKBP8Q14318 412 aa14.93□□□□□ -0.02
AP003501.1-201ENST00000524453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.9□□□□□ -0.02
AP003501.1-201ENST00000524453 HNRNPUL2Q1KMD3 747 aaKnown RBP14.9□□□□□ -0.02
AP003501.1-201ENST00000524453 SAMD1Q6SPF0 538 aaPredicted RBP14.89□□□□□ -0.03
AP003501.1-201ENST00000524453 AMER1Q5JTC6 1135 aaPredicted RBP14.8□□□□□ -0.04
AP003501.1-201ENST00000524453 RTN4Q9NQC3 1192 aaKnown RBP14.8□□□□□ -0.04
AP003501.1-201ENST00000524453 ZNF219Q9P2Y4 722 aaPredicted RBP14.6□□□□□ -0.07
AP003501.1-201ENST00000524453 APLP2Q06481 763 aa14.57□□□□□ -0.08
AP003501.1-201ENST00000524453 SLC24A1O60721 1099 aa14.43□□□□□ -0.1
AP003501.1-201ENST00000524453 MKRN4PQ13434 485 aaPredicted RBP14.37□□□□□ -0.11
AP003501.1-201ENST00000524453 RNF39Q9H2S5 420 aa14.31□□□□□ -0.12
AP003501.1-201ENST00000524453 SPINK5Q9NQ38 1064 aaPredicted RBP14.3□□□□□ -0.12
AP003501.1-201ENST00000524453 SPDYE4A6NLX3 237 aa14.29□□□□□ -0.12
AP003501.1-201ENST00000524453 PROM2Q8N271 834 aa14.28□□□□□ -0.12
AP003501.1-201ENST00000524453 TRHP20396 242 aaPredicted RBP14.22□□□□□ -0.13
AP003501.1-201ENST00000524453 FBLN2P98095 1184 aa14.2□□□□□ -0.14
AP003501.1-201ENST00000524453 FBXO3Q9UK99 471 aa14.2□□□□□ -0.14
AP003501.1-201ENST00000524453 POLA2Q14181 598 aa14.19□□□□□ -0.14
AP003501.1-201ENST00000524453 C1QBPQ07021 282 aaKnown RBP14.14□□□□□ -0.15
AP003501.1-201ENST00000524453 CAPN15O75808 1086 aa14.13□□□□□ -0.15
AP003501.1-201ENST00000524453 VASPP50552 380 aaPredicted RBP14.03□□□□□ -0.16
AP003501.1-201ENST00000524453 ZBTB12Q9Y330 459 aaPredicted RBP14□□□□□ -0.17
AP003501.1-201ENST00000524453 ABCB7O75027 752 aa13.94□□□□□ -0.18
AP003501.1-201ENST00000524453 IFNLR1Q8IU57 520 aaPredicted RBP13.92□□□□□ -0.18
AP003501.1-201ENST00000524453 DSG3P32926 999 aa13.83□□□□□ -0.2
AP003501.1-201ENST00000524453 SSUH2Q9Y2M2 353 aa13.73□□□□□ -0.21
AP003501.1-201ENST00000524453 CACNB1Q02641 598 aaPredicted RBP13.72□□□□□ -0.21
AP003501.1-201ENST00000524453 PKD2Q13563 968 aa13.72□□□□□ -0.21
AP003501.1-201ENST00000524453 ZNF692Q9BU19 519 aaPredicted RBP13.71□□□□□ -0.21
AP003501.1-201ENST00000524453 SPDYE2BA6NHP3 402 aa13.7□□□□□ -0.22
AP003501.1-201ENST00000524453 SPDYE6P0CI01 402 aa13.7□□□□□ -0.22
AP003501.1-201ENST00000524453 SPDYE2Q495Y8 402 aa13.7□□□□□ -0.22
AP003501.1-201ENST00000524453 OSCARQ8IYS5 282 aa13.7□□□□□ -0.22
AP003501.1-201ENST00000524453 PLCB2Q00722 1185 aa13.66□□□□□ -0.22
AP003501.1-201ENST00000524453 STAG3Q9UJ98 1225 aa13.64□□□□□ -0.23
AP003501.1-201ENST00000524453 SPOCK2Q92563 424 aa13.59□□□□□ -0.23
AP003501.1-201ENST00000524453 PABPN1Q86U42 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
AP003501.1-201ENST00000524453 KLHL34Q8N239 644 aa13.53□□□□□ -0.24
AP003501.1-201ENST00000524453 DCAF8L2P0C7V8 631 aa13.5□□□□□ -0.25
AP003501.1-201ENST00000524453 PLCD3Q8N3E9 789 aa13.46□□□□□ -0.25
AP003501.1-201ENST00000524453 ECM2O94769 699 aaPredicted RBP13.43□□□□□ -0.26
AP003501.1-201ENST00000524453 MIER1Q8N108 512 aa13.42□□□□□ -0.26
AP003501.1-201ENST00000524453 HAP1P54257 671 aaPredicted RBP13.38□□□□□ -0.27
AP003501.1-201ENST00000524453 NPM1P06748 294 aaKnown RBP eCLIP13.35□□□□□ -0.27
AP003501.1-201ENST00000524453 BBXQ8WY36 941 aaPredicted RBP13.34□□□□□ -0.27
AP003501.1-201ENST00000524453 RGL2O15211 777 aa13.33□□□□□ -0.28
AP003501.1-201ENST00000524453 ZBTB47Q9UFB7 747 aaPredicted RBP13.31□□□□□ -0.28
AP003501.1-201ENST00000524453 VSIG10Q8N0Z9 540 aa13.27□□□□□ -0.29
AP003501.1-201ENST00000524453 PLEKHG5O94827 1062 aa13.26□□□□□ -0.29
AP003501.1-201ENST00000524453 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.25□□□□□ -0.29
AP003501.1-201ENST00000524453 CIZ1Q9ULV3 898 aaPredicted RBP13.2□□□□□ -0.3
AP003501.1-201ENST00000524453 TRIM41Q8WV44 630 aa13.18□□□□□ -0.3
AP003501.1-201ENST00000524453 PAXIP1Q6ZW49 1069 aaPredicted RBP13.17□□□□□ -0.3
AP003501.1-201ENST00000524453 KDM2AQ9Y2K7 1162 aa13.13□□□□□ -0.31
AP003501.1-201ENST00000524453 NUBP1P53384 320 aa13.12□□□□□ -0.31
AP003501.1-201ENST00000524453 AKT1S1Q96B36 256 aa13.12□□□□□ -0.31
AP003501.1-201ENST00000524453 BCANQ96GW7 911 aa13.12□□□□□ -0.31
AP003501.1-201ENST00000524453 SPDYE1Q8NFV5 336 aaPredicted RBP13.11□□□□□ -0.31
AP003501.1-201ENST00000524453 CFAP44Q96MT7 982 aa13.11□□□□□ -0.31
AP003501.1-201ENST00000524453 RBM42Q9BTD8 480 aaKnown RBP13.11□□□□□ -0.31
AP003501.1-201ENST00000524453 CHGAP10645 457 aaKnown RBP13.08□□□□□ -0.32
AP003501.1-201ENST00000524453 GSE1Q14687 1217 aa13.08□□□□□ -0.32
AP003501.1-201ENST00000524453 SPRYD3Q8NCJ5 442 aa13.08□□□□□ -0.32
AP003501.1-201ENST00000524453 RNF25Q96BH1 459 aaPredicted RBP13.08□□□□□ -0.32
AP003501.1-201ENST00000524453 HS6ST3Q8IZP7 471 aa13.06□□□□□ -0.32
AP003501.1-201ENST00000524453 DNAJC5Q9H3Z4 198 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms