RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 NISCHQ9Y2I1 1504 aa33.89■■■■□ 3.02
PCDHGA11-202ENST00000518882 SHROOM4Q9ULL8 1493 aa29.1■■■□□ 2.25
PCDHGA11-202ENST00000518882 ZCCHC6Q5VYS8 1495 aaKnown RBP28.73■■■□□ 2.19
PCDHGA11-202ENST00000518882 CCDC180Q9P1Z9 1646 aa28.72■■■□□ 2.19
PCDHGA11-202ENST00000518882 SUPT5HO00267 1087 aaKnown RBP28.6■■■□□ 2.17
PCDHGA11-202ENST00000518882 MYO15BQ96JP2 1530 aa27.99■■■□□ 2.07
PCDHGA11-202ENST00000518882 DCAF8L2P0C7V8 631 aa27.99■■■□□ 2.07
PCDHGA11-202ENST00000518882 CHIC1Q5VXU3 224 aa27.93■■■□□ 2.06
PCDHGA11-202ENST00000518882 DCAF1Q9Y4B6 1507 aa27.78■■■□□ 2.04
PCDHGA11-202ENST00000518882 HRCP23327 699 aa27.47■■□□□ 1.99
PCDHGA11-202ENST00000518882 PCGF6Q9BYE7 350 aa27.3■■□□□ 1.96
PCDHGA11-202ENST00000518882 ABCC9O60706 1549 aa27.18■■□□□ 1.94
PCDHGA11-202ENST00000518882 LOC105371045A0A1W2PR82 267 aa27.15■■□□□ 1.94
PCDHGA11-202ENST00000518882 SCRIBQ14160 1630 aa27■■□□□ 1.91
PCDHGA11-202ENST00000518882 PPARGC1BQ86YN6 1023 aaKnown RBP26.92■■□□□ 1.9
PCDHGA11-202ENST00000518882 RSF1Q96T23 1441 aaPredicted RBP26.91■■□□□ 1.9
PCDHGA11-202ENST00000518882 RB1CC1Q8TDY2 1594 aa26.74■■□□□ 1.87
PCDHGA11-202ENST00000518882 TRIM26Q12899 539 aaPredicted RBP26.69■■□□□ 1.86
PCDHGA11-202ENST00000518882 TRIM41Q8WV44 630 aa26.59■■□□□ 1.85
PCDHGA11-202ENST00000518882 CECR2Q9BXF3 1484 aa26.47■■□□□ 1.83
PCDHGA11-202ENST00000518882 NACADO15069 1562 aa26.45■■□□□ 1.83
PCDHGA11-202ENST00000518882 FAM9AQ8IZU1 332 aaPredicted RBP26.42■■□□□ 1.82
PCDHGA11-202ENST00000518882 MROH2BQ7Z745 1585 aa26.4■■□□□ 1.82
PCDHGA11-202ENST00000518882 WIZO95785 1651 aa26.31■■□□□ 1.8
PCDHGA11-202ENST00000518882 EHMT2Q96KQ7 1210 aa26.22■■□□□ 1.79
PCDHGA11-202ENST00000518882 ZEB1P37275 1124 aaPredicted RBP26.16■■□□□ 1.78
PCDHGA11-202ENST00000518882 BAZ1AQ9NRL2 1556 aaPredicted RBP26.12■■□□□ 1.77
PCDHGA11-202ENST00000518882 EIF4G1Q04637 1599 aaKnown RBP26.07■■□□□ 1.76
PCDHGA11-202ENST00000518882 TOP2AP11388 1531 aaKnown RBP25.83■■□□□ 1.73
PCDHGA11-202ENST00000518882 ABCC8Q09428 1581 aa25.8■■□□□ 1.72
PCDHGA11-202ENST00000518882 SMARCA4P51532 1647 aa25.79■■□□□ 1.72
PCDHGA11-202ENST00000518882 UNC13AQ9UPW8 1703 aa25.77■■□□□ 1.72
PCDHGA11-202ENST00000518882 CCDC88BA6NC98 1476 aa25.74■■□□□ 1.71
PCDHGA11-202ENST00000518882 SMARCA2P51531 1590 aa25.73■■□□□ 1.71
PCDHGA11-202ENST00000518882 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.63■■□□□ 1.69
PCDHGA11-202ENST00000518882 SOGA1O94964 1423 aa25.56■■□□□ 1.68
PCDHGA11-202ENST00000518882 WRNQ14191 1432 aaPredicted RBP eCLIP25.56■■□□□ 1.68
PCDHGA11-202ENST00000518882 CEP162Q5TB80 1403 aa25.54■■□□□ 1.68
PCDHGA11-202ENST00000518882 CCER1Q8TC90 406 aaPredicted RBP25.53■■□□□ 1.68
PCDHGA11-202ENST00000518882 SCAF1Q9H7N4 1312 aaKnown RBP25.49■■□□□ 1.67
PCDHGA11-202ENST00000518882 RUSC2Q8N2Y8 1516 aa25.46■■□□□ 1.67
PCDHGA11-202ENST00000518882 TTBK1Q5TCY1 1321 aaPredicted RBP25.44■■□□□ 1.66
PCDHGA11-202ENST00000518882 TNIKQ9UKE5 1360 aa25.44■■□□□ 1.66
PCDHGA11-202ENST00000518882 EEA1Q15075 1411 aa25.38■■□□□ 1.65
PCDHGA11-202ENST00000518882 CSRNP3Q8WYN3 585 aa25.37■■□□□ 1.65
PCDHGA11-202ENST00000518882 BICRAQ9NZM4 1560 aa25.35■■□□□ 1.65
PCDHGA11-202ENST00000518882 UBTFP17480 764 aaKnown RBP25.29■■□□□ 1.64
PCDHGA11-202ENST00000518882 PABPN1Q86U42 306 aaKnown RBP eCLIP25.29■■□□□ 1.64
PCDHGA11-202ENST00000518882 GOLGA3Q08378 1498 aa25.27■■□□□ 1.64
PCDHGA11-202ENST00000518882 PEG3Q9GZU2 1588 aa25.27■■□□□ 1.64
PCDHGA11-202ENST00000518882 SYNJ1O43426 1573 aa25.2■■□□□ 1.63
PCDHGA11-202ENST00000518882 DIEXFQ68CQ4 756 aaKnown RBP25.17■■□□□ 1.62
PCDHGA11-202ENST00000518882 ACIN1Q9UKV3 1341 aaKnown RBP25.13■■□□□ 1.61
PCDHGA11-202ENST00000518882 NEUROD1Q13562 356 aa25.11■■□□□ 1.61
PCDHGA11-202ENST00000518882 KIF21BO75037 1637 aa25.11■■□□□ 1.61
PCDHGA11-202ENST00000518882 CEP164Q9UPV0 1460 aa25.09■■□□□ 1.61
PCDHGA11-202ENST00000518882 PELP1Q8IZL8 1130 aaKnown RBP25.09■■□□□ 1.61
PCDHGA11-202ENST00000518882 ATAD2BQ9ULI0 1458 aa25.04■■□□□ 1.6
PCDHGA11-202ENST00000518882 CLIP1P30622 1438 aa24.99■■□□□ 1.59
PCDHGA11-202ENST00000518882 BAZ1BQ9UIG0 1483 aaKnown RBP24.97■■□□□ 1.59
PCDHGA11-202ENST00000518882 RAPGEF2Q9Y4G8 1499 aa24.93■■□□□ 1.58
PCDHGA11-202ENST00000518882 VPS8Q8N3P4 1428 aa24.92■■□□□ 1.58
PCDHGA11-202ENST00000518882 ZNF316A6NFI3 1004 aaPredicted RBP24.92■■□□□ 1.58
PCDHGA11-202ENST00000518882 HNRNPUL2Q1KMD3 747 aaKnown RBP24.9■■□□□ 1.58
PCDHGA11-202ENST00000518882 CENPBP07199 599 aaPredicted RBP24.88■■□□□ 1.57
PCDHGA11-202ENST00000518882 GTF3C3Q9Y5Q9 886 aa24.86■■□□□ 1.57
PCDHGA11-202ENST00000518882 TOP2BQ02880 1626 aa24.84■■□□□ 1.57
PCDHGA11-202ENST00000518882 RANGAP1P46060 587 aaPredicted RBP24.77■■□□□ 1.56
PCDHGA11-202ENST00000518882 BIVM-ERCC5R4GMW8 1640 aa24.76■■□□□ 1.55
PCDHGA11-202ENST00000518882 APLP2Q06481 763 aa24.72■■□□□ 1.55
PCDHGA11-202ENST00000518882 ERICH3Q5RHP9 1530 aa24.65■■□□□ 1.54
PCDHGA11-202ENST00000518882 MIER1Q8N108 512 aa24.64■■□□□ 1.53
PCDHGA11-202ENST00000518882 PRXQ9BXM0 1461 aa24.63■■□□□ 1.53
PCDHGA11-202ENST00000518882 ARAP1Q96P48 1450 aa24.61■■□□□ 1.53
PCDHGA11-202ENST00000518882 YTHDC1Q96MU7 727 aaKnown RBP24.61■■□□□ 1.53
PCDHGA11-202ENST00000518882 CUX1P39880 1505 aa24.55■■□□□ 1.52
PCDHGA11-202ENST00000518882 HMGXB3Q12766 1538 aa24.52■■□□□ 1.52
PCDHGA11-202ENST00000518882 KANK4Q5T7N3 995 aaPredicted RBP24.5■■□□□ 1.51
PCDHGA11-202ENST00000518882 NCAPD3P42695 1498 aa24.48■■□□□ 1.51
PCDHGA11-202ENST00000518882 DHX57Q6P158 1386 aaKnown RBP24.48■■□□□ 1.51
PCDHGA11-202ENST00000518882 KIF27Q86VH2 1401 aa24.42■■□□□ 1.5
PCDHGA11-202ENST00000518882 CLSPNQ9HAW4 1339 aa24.41■■□□□ 1.5
PCDHGA11-202ENST00000518882 RRBP1Q9P2E9 1410 aaKnown RBP24.38■■□□□ 1.49
PCDHGA11-202ENST00000518882 CFTRP13569 1480 aa24.37■■□□□ 1.49
PCDHGA11-202ENST00000518882 ARHGAP35Q9NRY4 1499 aa24.35■■□□□ 1.49
PCDHGA11-202ENST00000518882 CUX2O14529 1486 aa24.28■■□□□ 1.48
PCDHGA11-202ENST00000518882 PRDM2Q13029 1718 aa24.28■■□□□ 1.48
PCDHGA11-202ENST00000518882 CCNB3Q8WWL7 1395 aa24.25■■□□□ 1.47
PCDHGA11-202ENST00000518882 IGF1RP08069 1367 aa24.17■■□□□ 1.46
PCDHGA11-202ENST00000518882 ITGAEP38570 1179 aa24.15■■□□□ 1.46
PCDHGA11-202ENST00000518882 TIAM1Q13009 1591 aa24.14■■□□□ 1.45
PCDHGA11-202ENST00000518882 RAB3GAP2Q9H2M9 1393 aa24.08■■□□□ 1.45
PCDHGA11-202ENST00000518882 MAPKBP1O60336 1514 aa24.07■■□□□ 1.44
PCDHGA11-202ENST00000518882 MAP3K1Q13233 1512 aa24.07■■□□□ 1.44
PCDHGA11-202ENST00000518882 FGD5Q6ZNL6 1462 aa24.06■■□□□ 1.44
PCDHGA11-202ENST00000518882 CARMIL1Q5VZK9 1371 aa24.05■■□□□ 1.44
PCDHGA11-202ENST00000518882 CADPSQ9ULU8 1353 aa24.02■■□□□ 1.44
PCDHGA11-202ENST00000518882 LRRC9Q6ZRR7 1453 aa24.02■■□□□ 1.44
PCDHGA11-202ENST00000518882 PHLDB1Q86UU1 1377 aa23.99■■□□□ 1.43
PCDHGA11-202ENST00000518882 CFAP43Q8NDM7 1665 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms