RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 AEBP2Q6ZN18 517 aaPredicted RBP9.98□□□□□ -0.81
SCARNA3-201ENST00000517097 CHIC1Q5VXU3 224 aa9.45□□□□□ -0.9
SCARNA3-201ENST00000517097 SENP3Q9H4L4 574 aaPredicted RBP8.46□□□□□ -1.06
SCARNA3-201ENST00000517097 PHF23Q9BUL5 403 aaPredicted RBP8.37□□□□□ -1.07
SCARNA3-201ENST00000517097 FOXD1Q16676 465 aa7.92□□□□□ -1.14
SCARNA3-201ENST00000517097 PLPPR3Q6T4P5 718 aa7.53□□□□□ -1.2
SCARNA3-201ENST00000517097 PPP6R1Q9UPN7 881 aa7.43□□□□□ -1.22
SCARNA3-201ENST00000517097 ADRA2BP18089 450 aa7.39□□□□□ -1.23
SCARNA3-201ENST00000517097 PIAS4Q8N2W9 510 aaPredicted RBP7.39□□□□□ -1.23
SCARNA3-201ENST00000517097 MSH5O43196 834 aa7.37□□□□□ -1.23
SCARNA3-201ENST00000517097 POTEDQ86YR6 584 aa7.23□□□□□ -1.25
SCARNA3-201ENST00000517097 MAPK8IP2Q13387 824 aaPredicted RBP6.79□□□□□ -1.32
SCARNA3-201ENST00000517097 DMRT2Q9Y5R5 561 aa6.72□□□□□ -1.33
SCARNA3-201ENST00000517097 SCAF1Q9H7N4 1312 aaKnown RBP6.7□□□□□ -1.34
SCARNA3-201ENST00000517097 PPP4R3CPQ6ZMV5 832 aa6.62□□□□□ -1.35
SCARNA3-201ENST00000517097 EHMT2Q96KQ7 1210 aa6.57□□□□□ -1.36
SCARNA3-201ENST00000517097 HOXD11P31277 338 aaPredicted RBP6.48□□□□□ -1.37
SCARNA3-201ENST00000517097 CNKSR2Q8WXI2 1034 aa6.48□□□□□ -1.37
SCARNA3-201ENST00000517097 KCNA4P22459 653 aa6.46□□□□□ -1.38
SCARNA3-201ENST00000517097 DCAF8L1A6NGE4 600 aa6.44□□□□□ -1.38
SCARNA3-201ENST00000517097 RNF216Q9NWF9 866 aaPredicted RBP6.42□□□□□ -1.38
SCARNA3-201ENST00000517097 CACNB1Q02641 598 aaPredicted RBP6.33□□□□□ -1.4
SCARNA3-201ENST00000517097 NCBP3Q53F19 620 aaKnown RBP6.33□□□□□ -1.4
SCARNA3-201ENST00000517097 RNF39Q9H2S5 420 aa6.31□□□□□ -1.4
SCARNA3-201ENST00000517097 CSRNP3Q8WYN3 585 aa6.3□□□□□ -1.4
SCARNA3-201ENST00000517097 NPM3O75607 178 aaKnown RBP6.28□□□□□ -1.4
SCARNA3-201ENST00000517097 SLC4A1APQ9BWU0 796 aaKnown RBP6.22□□□□□ -1.41
SCARNA3-201ENST00000517097 DNAJC5BQ9UF47 199 aa6.22□□□□□ -1.41
SCARNA3-201ENST00000517097 C1QBPQ07021 282 aaKnown RBP6.2□□□□□ -1.42
SCARNA3-201ENST00000517097 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.16□□□□□ -1.42
SCARNA3-201ENST00000517097 SLC24A1O60721 1099 aa6.1□□□□□ -1.43
SCARNA3-201ENST00000517097 U3KPZ7 1027 aaPredicted RBP6.06□□□□□ -1.44
SCARNA3-201ENST00000517097 SLC4A2P04920 1241 aa6.01□□□□□ -1.45
SCARNA3-201ENST00000517097 SPINK5Q9NQ38 1064 aaPredicted RBP5.98□□□□□ -1.45
SCARNA3-201ENST00000517097 ZBTB22O15209 634 aa5.96□□□□□ -1.46
SCARNA3-201ENST00000517097 RTN4Q9NQC3 1192 aaKnown RBP5.95□□□□□ -1.46
SCARNA3-201ENST00000517097 CAPN15O75808 1086 aa5.94□□□□□ -1.46
SCARNA3-201ENST00000517097 AMER1Q5JTC6 1135 aaPredicted RBP5.93□□□□□ -1.46
SCARNA3-201ENST00000517097 DSG3P32926 999 aa5.92□□□□□ -1.46
SCARNA3-201ENST00000517097 TRHP20396 242 aaPredicted RBP5.85□□□□□ -1.47
SCARNA3-201ENST00000517097 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.83□□□□□ -1.48
SCARNA3-201ENST00000517097 HNRNPUL2Q1KMD3 747 aaKnown RBP5.83□□□□□ -1.48
SCARNA3-201ENST00000517097 ABCB7O75027 752 aa5.82□□□□□ -1.48
SCARNA3-201ENST00000517097 APLP2Q06481 763 aa5.82□□□□□ -1.48
SCARNA3-201ENST00000517097 ZNF219Q9P2Y4 722 aaPredicted RBP5.82□□□□□ -1.48
SCARNA3-201ENST00000517097 SAMD1Q6SPF0 538 aaPredicted RBP5.81□□□□□ -1.48
SCARNA3-201ENST00000517097 FOXD4L1Q9NU39 408 aa5.81□□□□□ -1.48
SCARNA3-201ENST00000517097 MYCNP04198 464 aaPredicted RBP5.79□□□□□ -1.48
SCARNA3-201ENST00000517097 ATF5Q9Y2D1 282 aaPredicted RBP5.7□□□□□ -1.5
SCARNA3-201ENST00000517097 POLA2Q14181 598 aa5.69□□□□□ -1.5
SCARNA3-201ENST00000517097 FKBP8Q14318 412 aa5.66□□□□□ -1.5
SCARNA3-201ENST00000517097 POTEHQ6S545 545 aa5.66□□□□□ -1.5
SCARNA3-201ENST00000517097 RBM42Q9BTD8 480 aaKnown RBP5.61□□□□□ -1.51
SCARNA3-201ENST00000517097 ATXN8OSP0DMR3 200 aa5.55□□□□□ -1.52
SCARNA3-201ENST00000517097 ZBTB12Q9Y330 459 aaPredicted RBP5.54□□□□□ -1.52
SCARNA3-201ENST00000517097 OSCARQ8IYS5 282 aa5.53□□□□□ -1.52
SCARNA3-201ENST00000517097 CHRDL2Q6WN34 429 aa5.52□□□□□ -1.53
SCARNA3-201ENST00000517097 AKT1S1Q96B36 256 aa5.5□□□□□ -1.53
SCARNA3-201ENST00000517097 PLCB2Q00722 1185 aa5.45□□□□□ -1.54
SCARNA3-201ENST00000517097 REM2Q8IYK8 340 aaPredicted RBP5.45□□□□□ -1.54
SCARNA3-201ENST00000517097 MKRN4PQ13434 485 aaPredicted RBP5.44□□□□□ -1.54
SCARNA3-201ENST00000517097 FBLN2P98095 1184 aa5.42□□□□□ -1.54
SCARNA3-201ENST00000517097 PITPNM1O00562 1244 aa5.41□□□□□ -1.54
SCARNA3-201ENST00000517097 PIP4P2Q8N4L2 257 aa5.4□□□□□ -1.54
SCARNA3-201ENST00000517097 SPDYE2BA6NHP3 402 aa5.39□□□□□ -1.55
SCARNA3-201ENST00000517097 SPDYE6P0CI01 402 aa5.39□□□□□ -1.55
SCARNA3-201ENST00000517097 PRKCSHP14314 528 aaPredicted RBP5.39□□□□□ -1.55
SCARNA3-201ENST00000517097 HAP1P54257 671 aaPredicted RBP5.39□□□□□ -1.55
SCARNA3-201ENST00000517097 SPDYE2Q495Y8 402 aa5.39□□□□□ -1.55
SCARNA3-201ENST00000517097 BCANQ96GW7 911 aa5.39□□□□□ -1.55
SCARNA3-201ENST00000517097 FXR2P51116 673 aaKnown RBP eCLIP5.35□□□□□ -1.55
SCARNA3-201ENST00000517097 TAOK2Q9UL54 1235 aa5.34□□□□□ -1.55
SCARNA3-201ENST00000517097 SSUH2Q9Y2M2 353 aa5.34□□□□□ -1.55
SCARNA3-201ENST00000517097 ZNF692Q9BU19 519 aaPredicted RBP5.33□□□□□ -1.56
SCARNA3-201ENST00000517097 VSIG10Q8N0Z9 540 aa5.32□□□□□ -1.56
SCARNA3-201ENST00000517097 SP7Q8TDD2 431 aaPredicted RBP5.3□□□□□ -1.56
SCARNA3-201ENST00000517097 FBXO3Q9UK99 471 aa5.3□□□□□ -1.56
SCARNA3-201ENST00000517097 CLEC11AQ9Y240 323 aa5.3□□□□□ -1.56
SCARNA3-201ENST00000517097 DCAF8L2P0C7V8 631 aa5.29□□□□□ -1.56
SCARNA3-201ENST00000517097 SPDYE1Q8NFV5 336 aaPredicted RBP5.29□□□□□ -1.56
SCARNA3-201ENST00000517097 HAX1O00165 279 aa5.27□□□□□ -1.57
SCARNA3-201ENST00000517097 PABPN1Q86U42 306 aaKnown RBP eCLIP5.27□□□□□ -1.57
SCARNA3-201ENST00000517097 PRKAR2AP13861 404 aaKnown RBP5.26□□□□□ -1.57
SCARNA3-201ENST00000517097 TPRNQ4KMQ1 711 aa5.26□□□□□ -1.57
SCARNA3-201ENST00000517097 EVX2Q03828 476 aa5.25□□□□□ -1.57
SCARNA3-201ENST00000517097 VASPP50552 380 aaPredicted RBP5.23□□□□□ -1.57
SCARNA3-201ENST00000517097 CHADLQ6NUI6 762 aa5.22□□□□□ -1.57
SCARNA3-201ENST00000517097 IFNLR1Q8IU57 520 aaPredicted RBP5.22□□□□□ -1.57
SCARNA3-201ENST00000517097 KDM2AQ9Y2K7 1162 aa5.22□□□□□ -1.57
SCARNA3-201ENST00000517097 SPDYE4A6NLX3 237 aa5.21□□□□□ -1.58
SCARNA3-201ENST00000517097 PKD2Q13563 968 aa5.21□□□□□ -1.58
SCARNA3-201ENST00000517097 PRR29P0C7W0 189 aa5.2□□□□□ -1.58
SCARNA3-201ENST00000517097 PROM2Q8N271 834 aa5.2□□□□□ -1.58
SCARNA3-201ENST00000517097 C19orf67A6NJJ6 358 aa5.18□□□□□ -1.58
SCARNA3-201ENST00000517097 BBXQ8WY36 941 aaPredicted RBP5.17□□□□□ -1.58
SCARNA3-201ENST00000517097 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.17□□□□□ -1.58
SCARNA3-201ENST00000517097 PAXIP1Q6ZW49 1069 aaPredicted RBP5.16□□□□□ -1.58
SCARNA3-201ENST00000517097 CFAP44Q96MT7 982 aa5.14□□□□□ -1.59
SCARNA3-201ENST00000517097 NPM1P06748 294 aaKnown RBP eCLIP5.13□□□□□ -1.59
SCARNA3-201ENST00000517097 FARP1Q9Y4F1 1045 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms