RNA–Protein interactions for RNA: ENST00000516942.1

RNU6-143P-201, Transcript of RNA, U6 small nuclear 143, pseudogene, humanhuman

BASIC

Gene RNU6-143P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-143P-201ENST00000516942 AEBP2Q6ZN18 517 aaPredicted RBP13.51□□□□□ -0.25
RNU6-143P-201ENST00000516942 CHIC1Q5VXU3 224 aa13.48□□□□□ -0.25
RNU6-143P-201ENST00000516942 PHF23Q9BUL5 403 aaPredicted RBP11.94□□□□□ -0.5
RNU6-143P-201ENST00000516942 SENP3Q9H4L4 574 aaPredicted RBP11.32□□□□□ -0.6
RNU6-143P-201ENST00000516942 PLPPR3Q6T4P5 718 aa11.03□□□□□ -0.64
RNU6-143P-201ENST00000516942 FOXD1Q16676 465 aa10.52□□□□□ -0.73
RNU6-143P-201ENST00000516942 PPP6R1Q9UPN7 881 aa10.42□□□□□ -0.74
RNU6-143P-201ENST00000516942 ADRA2BP18089 450 aa10.37□□□□□ -0.75
RNU6-143P-201ENST00000516942 KCNA4P22459 653 aa9.92□□□□□ -0.82
RNU6-143P-201ENST00000516942 PIAS4Q8N2W9 510 aaPredicted RBP9.89□□□□□ -0.83
RNU6-143P-201ENST00000516942 PPP4R3CPQ6ZMV5 832 aa9.78□□□□□ -0.84
RNU6-143P-201ENST00000516942 NCBP3Q53F19 620 aaKnown RBP9.55□□□□□ -0.88
RNU6-143P-201ENST00000516942 MSH5O43196 834 aa9.51□□□□□ -0.89
RNU6-143P-201ENST00000516942 NPM3O75607 178 aaKnown RBP9.5□□□□□ -0.89
RNU6-143P-201ENST00000516942 EHMT2Q96KQ7 1210 aa9.48□□□□□ -0.89
RNU6-143P-201ENST00000516942 SLC4A1APQ9BWU0 796 aaKnown RBP9.45□□□□□ -0.9
RNU6-143P-201ENST00000516942 CNKSR2Q8WXI2 1034 aa9.43□□□□□ -0.9
RNU6-143P-201ENST00000516942 SCAF1Q9H7N4 1312 aaKnown RBP9.41□□□□□ -0.9
RNU6-143P-201ENST00000516942 CSRNP3Q8WYN3 585 aa9.39□□□□□ -0.91
RNU6-143P-201ENST00000516942 DNAJC5BQ9UF47 199 aa9.34□□□□□ -0.91
RNU6-143P-201ENST00000516942 MAPK8IP2Q13387 824 aaPredicted RBP9.32□□□□□ -0.92
RNU6-143P-201ENST00000516942 ZBTB22O15209 634 aa9.19□□□□□ -0.94
RNU6-143P-201ENST00000516942 RNF216Q9NWF9 866 aaPredicted RBP9.19□□□□□ -0.94
RNU6-143P-201ENST00000516942 DMRT2Q9Y5R5 561 aa9.14□□□□□ -0.95
RNU6-143P-201ENST00000516942 HOXD11P31277 338 aaPredicted RBP9.11□□□□□ -0.95
RNU6-143P-201ENST00000516942 FOXD4L1Q9NU39 408 aa9.01□□□□□ -0.97
RNU6-143P-201ENST00000516942 SLC4A2P04920 1241 aa8.94□□□□□ -0.98
RNU6-143P-201ENST00000516942 ATXN8OSP0DMR3 200 aa8.73□□□□□ -1.01
RNU6-143P-201ENST00000516942 MYCNP04198 464 aaPredicted RBP8.72□□□□□ -1.01
RNU6-143P-201ENST00000516942 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.53□□□□□ -1.04
RNU6-143P-201ENST00000516942 ATF5Q9Y2D1 282 aaPredicted RBP8.53□□□□□ -1.04
RNU6-143P-201ENST00000516942 U3KPZ7 1027 aaPredicted RBP8.53□□□□□ -1.04
RNU6-143P-201ENST00000516942 DCAF8L1A6NGE4 600 aa8.52□□□□□ -1.05
RNU6-143P-201ENST00000516942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.46□□□□□ -1.06
RNU6-143P-201ENST00000516942 HNRNPUL2Q1KMD3 747 aaKnown RBP8.46□□□□□ -1.06
RNU6-143P-201ENST00000516942 SAMD1Q6SPF0 538 aaPredicted RBP8.46□□□□□ -1.06
RNU6-143P-201ENST00000516942 FKBP8Q14318 412 aa8.35□□□□□ -1.07
RNU6-143P-201ENST00000516942 ZNF219Q9P2Y4 722 aaPredicted RBP8.31□□□□□ -1.08
RNU6-143P-201ENST00000516942 APLP2Q06481 763 aa8.25□□□□□ -1.09
RNU6-143P-201ENST00000516942 RNF39Q9H2S5 420 aa8.24□□□□□ -1.09
RNU6-143P-201ENST00000516942 RTN4Q9NQC3 1192 aaKnown RBP8.22□□□□□ -1.09
RNU6-143P-201ENST00000516942 AMER1Q5JTC6 1135 aaPredicted RBP8.2□□□□□ -1.1
RNU6-143P-201ENST00000516942 MKRN4PQ13434 485 aaPredicted RBP8.19□□□□□ -1.1
RNU6-143P-201ENST00000516942 SPINK5Q9NQ38 1064 aaPredicted RBP8.17□□□□□ -1.1
RNU6-143P-201ENST00000516942 C1QBPQ07021 282 aaKnown RBP8.14□□□□□ -1.11
RNU6-143P-201ENST00000516942 PROM2Q8N271 834 aa8.14□□□□□ -1.11
RNU6-143P-201ENST00000516942 POTEDQ86YR6 584 aa8.13□□□□□ -1.11
RNU6-143P-201ENST00000516942 POLA2Q14181 598 aa8.08□□□□□ -1.12
RNU6-143P-201ENST00000516942 TRHP20396 242 aaPredicted RBP8.07□□□□□ -1.12
RNU6-143P-201ENST00000516942 SPDYE4A6NLX3 237 aa8.06□□□□□ -1.12
RNU6-143P-201ENST00000516942 CAPN15O75808 1086 aa8.02□□□□□ -1.13
RNU6-143P-201ENST00000516942 FBLN2P98095 1184 aa8.01□□□□□ -1.13
RNU6-143P-201ENST00000516942 FBXO3Q9UK99 471 aa7.98□□□□□ -1.13
RNU6-143P-201ENST00000516942 DSG3P32926 999 aa7.95□□□□□ -1.14
RNU6-143P-201ENST00000516942 ZBTB12Q9Y330 459 aaPredicted RBP7.94□□□□□ -1.14
RNU6-143P-201ENST00000516942 ABCB7O75027 752 aa7.92□□□□□ -1.14
RNU6-143P-201ENST00000516942 SLC24A1O60721 1099 aa7.9□□□□□ -1.14
RNU6-143P-201ENST00000516942 VASPP50552 380 aaPredicted RBP7.88□□□□□ -1.15
RNU6-143P-201ENST00000516942 IFNLR1Q8IU57 520 aaPredicted RBP7.86□□□□□ -1.15
RNU6-143P-201ENST00000516942 SSUH2Q9Y2M2 353 aa7.83□□□□□ -1.16
RNU6-143P-201ENST00000516942 SPDYE2BA6NHP3 402 aa7.8□□□□□ -1.16
RNU6-143P-201ENST00000516942 SPDYE6P0CI01 402 aa7.8□□□□□ -1.16
RNU6-143P-201ENST00000516942 SPDYE2Q495Y8 402 aa7.8□□□□□ -1.16
RNU6-143P-201ENST00000516942 ZNF692Q9BU19 519 aaPredicted RBP7.78□□□□□ -1.16
RNU6-143P-201ENST00000516942 OSCARQ8IYS5 282 aa7.77□□□□□ -1.17
RNU6-143P-201ENST00000516942 PKD2Q13563 968 aa7.74□□□□□ -1.17
RNU6-143P-201ENST00000516942 STAG3Q9UJ98 1225 aa7.73□□□□□ -1.17
RNU6-143P-201ENST00000516942 PABPN1Q86U42 306 aaKnown RBP eCLIP7.69□□□□□ -1.18
RNU6-143P-201ENST00000516942 CACNB1Q02641 598 aaPredicted RBP7.67□□□□□ -1.18
RNU6-143P-201ENST00000516942 SPOCK2Q92563 424 aa7.64□□□□□ -1.19
RNU6-143P-201ENST00000516942 PLCB2Q00722 1185 aa7.6□□□□□ -1.19
RNU6-143P-201ENST00000516942 MIER1Q8N108 512 aa7.57□□□□□ -1.2
RNU6-143P-201ENST00000516942 KLHL34Q8N239 644 aa7.57□□□□□ -1.2
RNU6-143P-201ENST00000516942 PLCD3Q8N3E9 789 aa7.56□□□□□ -1.2
RNU6-143P-201ENST00000516942 NPM1P06748 294 aaKnown RBP eCLIP7.52□□□□□ -1.21
RNU6-143P-201ENST00000516942 ECM2O94769 699 aaPredicted RBP7.51□□□□□ -1.21
RNU6-143P-201ENST00000516942 AKT1S1Q96B36 256 aa7.51□□□□□ -1.21
RNU6-143P-201ENST00000516942 RGL2O15211 777 aa7.49□□□□□ -1.21
RNU6-143P-201ENST00000516942 ZBTB47Q9UFB7 747 aaPredicted RBP7.49□□□□□ -1.21
RNU6-143P-201ENST00000516942 MNX1P50219 401 aaPredicted RBP7.47□□□□□ -1.21
RNU6-143P-201ENST00000516942 NUBP1P53384 320 aa7.47□□□□□ -1.21
RNU6-143P-201ENST00000516942 BBXQ8WY36 941 aaPredicted RBP7.47□□□□□ -1.21
RNU6-143P-201ENST00000516942 RBM42Q9BTD8 480 aaKnown RBP7.47□□□□□ -1.21
RNU6-143P-201ENST00000516942 SPDYE1Q8NFV5 336 aaPredicted RBP7.46□□□□□ -1.22
RNU6-143P-201ENST00000516942 PLEKHG5O94827 1062 aa7.44□□□□□ -1.22
RNU6-143P-201ENST00000516942 REM2Q8IYK8 340 aaPredicted RBP7.44□□□□□ -1.22
RNU6-143P-201ENST00000516942 CREBZFQ9NS37 354 aa7.44□□□□□ -1.22
RNU6-143P-201ENST00000516942 TRIM41Q8WV44 630 aa7.43□□□□□ -1.22
RNU6-143P-201ENST00000516942 DCAF8L2P0C7V8 631 aa7.42□□□□□ -1.22
RNU6-143P-201ENST00000516942 VSIG10Q8N0Z9 540 aa7.4□□□□□ -1.22
RNU6-143P-201ENST00000516942 DNAJC5Q9H3Z4 198 aa7.4□□□□□ -1.22
RNU6-143P-201ENST00000516942 RNF25Q96BH1 459 aaPredicted RBP7.39□□□□□ -1.23
RNU6-143P-201ENST00000516942 CIZ1Q9ULV3 898 aaPredicted RBP7.39□□□□□ -1.23
RNU6-143P-201ENST00000516942 GSE1Q14687 1217 aa7.38□□□□□ -1.23
RNU6-143P-201ENST00000516942 HAP1P54257 671 aaPredicted RBP7.37□□□□□ -1.23
RNU6-143P-201ENST00000516942 PRR29P0C7W0 189 aa7.36□□□□□ -1.23
RNU6-143P-201ENST00000516942 CHRM1P11229 460 aaPredicted RBP7.36□□□□□ -1.23
RNU6-143P-201ENST00000516942 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.36□□□□□ -1.23
RNU6-143P-201ENST00000516942 KDM2AQ9Y2K7 1162 aa7.35□□□□□ -1.23
RNU6-143P-201ENST00000516942 HS6ST3Q8IZP7 471 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms