RNA–Protein interactions for RNA: ENST00000516462.1

RNU6-1110P-201, Transcript of RNA, U6 small nuclear 1110, pseudogene, humanhuman

BASIC

Gene RNU6-1110P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1110P-201ENST00000516462 AEBP2Q6ZN18 517 aaPredicted RBP4.5□□□□□ -1.69
RNU6-1110P-201ENST00000516462 POTEDQ86YR6 584 aa4.5□□□□□ -1.69
RNU6-1110P-201ENST00000516462 CHIC1Q5VXU3 224 aa4.29□□□□□ -1.72
RNU6-1110P-201ENST00000516462 PHF23Q9BUL5 403 aaPredicted RBP3.84□□□□□ -1.79
RNU6-1110P-201ENST00000516462 SENP3Q9H4L4 574 aaPredicted RBP3.77□□□□□ -1.81
RNU6-1110P-201ENST00000516462 FOXD1Q16676 465 aa3.68□□□□□ -1.82
RNU6-1110P-201ENST00000516462 MSH5O43196 834 aa3.53□□□□□ -1.84
RNU6-1110P-201ENST00000516462 PLPPR3Q6T4P5 718 aa3.47□□□□□ -1.85
RNU6-1110P-201ENST00000516462 CACNB1Q02641 598 aaPredicted RBP3.44□□□□□ -1.86
RNU6-1110P-201ENST00000516462 POTEHQ6S545 545 aa3.39□□□□□ -1.87
RNU6-1110P-201ENST00000516462 PPP6R1Q9UPN7 881 aa3.38□□□□□ -1.87
RNU6-1110P-201ENST00000516462 ADRA2BP18089 450 aa3.36□□□□□ -1.87
RNU6-1110P-201ENST00000516462 PIAS4Q8N2W9 510 aaPredicted RBP3.29□□□□□ -1.88
RNU6-1110P-201ENST00000516462 KCNA4P22459 653 aa3.13□□□□□ -1.91
RNU6-1110P-201ENST00000516462 PPP4R3CPQ6ZMV5 832 aa3.11□□□□□ -1.91
RNU6-1110P-201ENST00000516462 PLSCR2Q9NRY7 297 aa3.09□□□□□ -1.91
RNU6-1110P-201ENST00000516462 MAPK8IP2Q13387 824 aaPredicted RBP3.06□□□□□ -1.92
RNU6-1110P-201ENST00000516462 RNF39Q9H2S5 420 aa3.02□□□□□ -1.93
RNU6-1110P-201ENST00000516462 NPM3O75607 178 aaKnown RBP3.01□□□□□ -1.93
RNU6-1110P-201ENST00000516462 NCBP3Q53F19 620 aaKnown RBP2.98□□□□□ -1.93
RNU6-1110P-201ENST00000516462 EHMT2Q96KQ7 1210 aa2.98□□□□□ -1.93
RNU6-1110P-201ENST00000516462 CNKSR2Q8WXI2 1034 aa2.97□□□□□ -1.93
RNU6-1110P-201ENST00000516462 SCAF1Q9H7N4 1312 aaKnown RBP2.96□□□□□ -1.93
RNU6-1110P-201ENST00000516462 SLC4A1APQ9BWU0 796 aaKnown RBP2.95□□□□□ -1.94
RNU6-1110P-201ENST00000516462 DMRT2Q9Y5R5 561 aa2.94□□□□□ -1.94
RNU6-1110P-201ENST00000516462 DCAF8L1A6NGE4 600 aa2.93□□□□□ -1.94
RNU6-1110P-201ENST00000516462 CSRNP3Q8WYN3 585 aa2.92□□□□□ -1.94
RNU6-1110P-201ENST00000516462 ZBTB22O15209 634 aa2.91□□□□□ -1.94
RNU6-1110P-201ENST00000516462 SP7Q8TDD2 431 aaPredicted RBP2.91□□□□□ -1.94
RNU6-1110P-201ENST00000516462 RNF216Q9NWF9 866 aaPredicted RBP2.9□□□□□ -1.95
RNU6-1110P-201ENST00000516462 HOXD11P31277 338 aaPredicted RBP2.89□□□□□ -1.95
RNU6-1110P-201ENST00000516462 C1QBPQ07021 282 aaKnown RBP2.88□□□□□ -1.95
RNU6-1110P-201ENST00000516462 SLC4A2P04920 1241 aa2.85□□□□□ -1.95
RNU6-1110P-201ENST00000516462 DNAJC5BQ9UF47 199 aa2.83□□□□□ -1.96
RNU6-1110P-201ENST00000516462 FOXD4L1Q9NU39 408 aa2.81□□□□□ -1.96
RNU6-1110P-201ENST00000516462 GRWD1Q9BQ67 446 aaKnown RBP eCLIP2.75□□□□□ -1.97
RNU6-1110P-201ENST00000516462 ATF5Q9Y2D1 282 aaPredicted RBP2.75□□□□□ -1.97
RNU6-1110P-201ENST00000516462 U3KPZ7 1027 aaPredicted RBP2.74□□□□□ -1.97
RNU6-1110P-201ENST00000516462 MYCNP04198 464 aaPredicted RBP2.73□□□□□ -1.97
RNU6-1110P-201ENST00000516462 LHX8Q68G74 356 aa2.73□□□□□ -1.97
RNU6-1110P-201ENST00000516462 CHRDL2Q6WN34 429 aa2.71□□□□□ -1.98
RNU6-1110P-201ENST00000516462 DSG3P32926 999 aa2.67□□□□□ -1.98
RNU6-1110P-201ENST00000516462 EVX2Q03828 476 aa2.67□□□□□ -1.98
RNU6-1110P-201ENST00000516462 SPINK5Q9NQ38 1064 aaPredicted RBP2.67□□□□□ -1.98
RNU6-1110P-201ENST00000516462 ATXN8OSP0DMR3 200 aa2.66□□□□□ -1.98
RNU6-1110P-201ENST00000516462 HAX1O00165 279 aa2.64□□□□□ -1.99
RNU6-1110P-201ENST00000516462 TRHP20396 242 aaPredicted RBP2.64□□□□□ -1.99
RNU6-1110P-201ENST00000516462 SAMD1Q6SPF0 538 aaPredicted RBP2.64□□□□□ -1.99
RNU6-1110P-201ENST00000516462 ZNF219Q9P2Y4 722 aaPredicted RBP2.64□□□□□ -1.99
RNU6-1110P-201ENST00000516462 POTEMA6NI47 508 aa2.63□□□□□ -1.99
RNU6-1110P-201ENST00000516462 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.62□□□□□ -1.99
RNU6-1110P-201ENST00000516462 ABCB7O75027 752 aa2.62□□□□□ -1.99
RNU6-1110P-201ENST00000516462 CAPN15O75808 1086 aa2.62□□□□□ -1.99
RNU6-1110P-201ENST00000516462 FKBP8Q14318 412 aa2.62□□□□□ -1.99
RNU6-1110P-201ENST00000516462 HNRNPUL2Q1KMD3 747 aaKnown RBP2.62□□□□□ -1.99
RNU6-1110P-201ENST00000516462 MKRN4PQ13434 485 aaPredicted RBP2.61□□□□□ -1.99
RNU6-1110P-201ENST00000516462 POLA2Q14181 598 aa2.6□□□□□ -1.99
RNU6-1110P-201ENST00000516462 POTEGQ6S5H5 508 aa2.6□□□□□ -1.99
RNU6-1110P-201ENST00000516462 APLP2Q06481 763 aa2.56□□□□□ -2
RNU6-1110P-201ENST00000516462 PIP4P2Q8N4L2 257 aa2.56□□□□□ -2
RNU6-1110P-201ENST00000516462 SPDYE4A6NLX3 237 aa2.54□□□□□ -2
RNU6-1110P-201ENST00000516462 FBLN2P98095 1184 aa2.52□□□□□ -2.01
RNU6-1110P-201ENST00000516462 OSCARQ8IYS5 282 aa2.52□□□□□ -2.01
RNU6-1110P-201ENST00000516462 RTN4Q9NQC3 1192 aaKnown RBP2.51□□□□□ -2.01
RNU6-1110P-201ENST00000516462 GABBR2O75899 941 aa2.49□□□□□ -2.01
RNU6-1110P-201ENST00000516462 POTEIP0CG38 1075 aa2.49□□□□□ -2.01
RNU6-1110P-201ENST00000516462 PROM2Q8N271 834 aa2.49□□□□□ -2.01
RNU6-1110P-201ENST00000516462 ZNF692Q9BU19 519 aaPredicted RBP2.48□□□□□ -2.01
RNU6-1110P-201ENST00000516462 ZBTB12Q9Y330 459 aaPredicted RBP2.47□□□□□ -2.01
RNU6-1110P-201ENST00000516462 PABPN1Q86U42 306 aaKnown RBP eCLIP2.46□□□□□ -2.02
RNU6-1110P-201ENST00000516462 IFNLR1Q8IU57 520 aaPredicted RBP2.46□□□□□ -2.02
RNU6-1110P-201ENST00000516462 OTUD5Q96G74 571 aa2.46□□□□□ -2.02
RNU6-1110P-201ENST00000516462 RBM42Q9BTD8 480 aaKnown RBP2.46□□□□□ -2.02
RNU6-1110P-201ENST00000516462 SSUH2Q9Y2M2 353 aa2.46□□□□□ -2.02
RNU6-1110P-201ENST00000516462 SPDYE2BA6NHP3 402 aa2.45□□□□□ -2.02
RNU6-1110P-201ENST00000516462 SPDYE6P0CI01 402 aa2.45□□□□□ -2.02
RNU6-1110P-201ENST00000516462 VASPP50552 380 aaPredicted RBP2.45□□□□□ -2.02
RNU6-1110P-201ENST00000516462 SPDYE2Q495Y8 402 aa2.45□□□□□ -2.02
RNU6-1110P-201ENST00000516462 LCE2DQ5TA82 110 aaPredicted RBP2.44□□□□□ -2.02
RNU6-1110P-201ENST00000516462 PCDH10Q9P2E7 1040 aa2.44□□□□□ -2.02
RNU6-1110P-201ENST00000516462 FBXO3Q9UK99 471 aa2.43□□□□□ -2.02
RNU6-1110P-201ENST00000516462 AMER1Q5JTC6 1135 aaPredicted RBP2.42□□□□□ -2.02
RNU6-1110P-201ENST00000516462 POTEB2H3BUK9 544 aa2.41□□□□□ -2.02
RNU6-1110P-201ENST00000516462 FXR2P51116 673 aaKnown RBP eCLIP2.41□□□□□ -2.02
RNU6-1110P-201ENST00000516462 REM2Q8IYK8 340 aaPredicted RBP2.4□□□□□ -2.03
RNU6-1110P-201ENST00000516462 MIER1Q8N108 512 aa2.4□□□□□ -2.03
RNU6-1110P-201ENST00000516462 CLEC11AQ9Y240 323 aa2.4□□□□□ -2.03
RNU6-1110P-201ENST00000516462 PKD2Q13563 968 aa2.39□□□□□ -2.03
RNU6-1110P-201ENST00000516462 KLHL34Q8N239 644 aa2.39□□□□□ -2.03
RNU6-1110P-201ENST00000516462 PLCD3Q8N3E9 789 aa2.39□□□□□ -2.03
RNU6-1110P-201ENST00000516462 PITPNM1O00562 1244 aa2.38□□□□□ -2.03
RNU6-1110P-201ENST00000516462 AKT1S1Q96B36 256 aa2.38□□□□□ -2.03
RNU6-1110P-201ENST00000516462 STAG3Q9UJ98 1225 aa2.38□□□□□ -2.03
RNU6-1110P-201ENST00000516462 CHADLQ6NUI6 762 aa2.37□□□□□ -2.03
RNU6-1110P-201ENST00000516462 SPOCK2Q92563 424 aa2.37□□□□□ -2.03
RNU6-1110P-201ENST00000516462 CREBZFQ9NS37 354 aa2.37□□□□□ -2.03
RNU6-1110P-201ENST00000516462 C19orf67A6NJJ6 358 aa2.36□□□□□ -2.03
RNU6-1110P-201ENST00000516462 PRR29P0C7W0 189 aa2.36□□□□□ -2.03
RNU6-1110P-201ENST00000516462 MNX1P50219 401 aaPredicted RBP2.36□□□□□ -2.03
RNU6-1110P-201ENST00000516462 MMRN1Q13201 1228 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms