RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 DCAF8L2P0C7V8 631 aa19.52■□□□□ 0.72
TRIM41-209ENST00000515834 SUPT5HO00267 1087 aaKnown RBP18.04■□□□□ 0.48
TRIM41-209ENST00000515834 EHMT2Q96KQ7 1210 aa18.02■□□□□ 0.48
TRIM41-209ENST00000515834 SHROOM4Q9ULL8 1493 aa17.67■□□□□ 0.42
TRIM41-209ENST00000515834 APLP2Q06481 763 aa17.49■□□□□ 0.39
TRIM41-209ENST00000515834 FAM9AQ8IZU1 332 aaPredicted RBP17.46■□□□□ 0.39
TRIM41-209ENST00000515834 PELP1Q8IZL8 1130 aaKnown RBP17.38■□□□□ 0.37
TRIM41-209ENST00000515834 TTBK1Q5TCY1 1321 aaPredicted RBP17.35■□□□□ 0.37
TRIM41-209ENST00000515834 RANGAP1P46060 587 aaPredicted RBP17.25■□□□□ 0.35
TRIM41-209ENST00000515834 ATP1B4Q9UN42 357 aaPredicted RBP17.17■□□□□ 0.34
TRIM41-209ENST00000515834 NISCHQ9Y2I1 1504 aa16.95■□□□□ 0.3
TRIM41-209ENST00000515834 ERICH6Q7L0X2 663 aa16.87■□□□□ 0.29
TRIM41-209ENST00000515834 PCGF6Q9BYE7 350 aa16.86■□□□□ 0.29
TRIM41-209ENST00000515834 MYT1LQ9UL68 1186 aa16.76■□□□□ 0.27
TRIM41-209ENST00000515834 CCER1Q8TC90 406 aaPredicted RBP16.66■□□□□ 0.26
TRIM41-209ENST00000515834 UBTFP17480 764 aaKnown RBP16.65■□□□□ 0.26
TRIM41-209ENST00000515834 TRIM41Q8WV44 630 aa16.59■□□□□ 0.25
TRIM41-209ENST00000515834 CHIC1Q5VXU3 224 aa16.58■□□□□ 0.24
TRIM41-209ENST00000515834 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.52■□□□□ 0.24
TRIM41-209ENST00000515834 HNRNPUL2Q1KMD3 747 aaKnown RBP16.52■□□□□ 0.24
TRIM41-209ENST00000515834 CENPBP07199 599 aaPredicted RBP16.47■□□□□ 0.23
TRIM41-209ENST00000515834 POLR3GLQ9BT43 218 aa16.47■□□□□ 0.23
TRIM41-209ENST00000515834 NEFLP07196 543 aa16.44■□□□□ 0.22
TRIM41-209ENST00000515834 YTHDC1Q96MU7 727 aaKnown RBP16.43■□□□□ 0.22
TRIM41-209ENST00000515834 PPARGC1BQ86YN6 1023 aaKnown RBP16.38■□□□□ 0.21
TRIM41-209ENST00000515834 CNGB1Q14028 1251 aaPredicted RBP16.35■□□□□ 0.21
TRIM41-209ENST00000515834 SLC4A1APQ9BWU0 796 aaKnown RBP16.34■□□□□ 0.21
TRIM41-209ENST00000515834 ITGAEP38570 1179 aa16.32■□□□□ 0.2
TRIM41-209ENST00000515834 ZEB1P37275 1124 aaPredicted RBP16.24■□□□□ 0.19
TRIM41-209ENST00000515834 DAXXQ9UER7 740 aaPredicted RBP16.2■□□□□ 0.18
TRIM41-209ENST00000515834 MYT1Q01538 1121 aa16.15■□□□□ 0.18
TRIM41-209ENST00000515834 CLSPNQ9HAW4 1339 aa15.91■□□□□ 0.14
TRIM41-209ENST00000515834 SLC24A1O60721 1099 aa15.9■□□□□ 0.14
TRIM41-209ENST00000515834 BCANQ96GW7 911 aa15.83■□□□□ 0.13
TRIM41-209ENST00000515834 FBLN2P98095 1184 aa15.81■□□□□ 0.12
TRIM41-209ENST00000515834 BCL11AQ9H165 835 aa15.79■□□□□ 0.12
TRIM41-209ENST00000515834 TRIM52Q96A61 297 aa15.79■□□□□ 0.12
TRIM41-209ENST00000515834 ZNF316A6NFI3 1004 aaPredicted RBP15.79■□□□□ 0.12
TRIM41-209ENST00000515834 FAM50AQ14320 339 aaKnown RBP15.78■□□□□ 0.12
TRIM41-209ENST00000515834 TRIM26Q12899 539 aaPredicted RBP15.7■□□□□ 0.1
TRIM41-209ENST00000515834 ZNF326Q5BKZ1 582 aaKnown RBP15.7■□□□□ 0.1
TRIM41-209ENST00000515834 PLPPR3Q6T4P5 718 aa15.7■□□□□ 0.1
TRIM41-209ENST00000515834 PABPN1Q86U42 306 aaKnown RBP eCLIP15.67■□□□□ 0.1
TRIM41-209ENST00000515834 ZBTB47Q9UFB7 747 aaPredicted RBP15.66■□□□□ 0.1
TRIM41-209ENST00000515834 LOC105371045A0A1W2PR82 267 aa15.64■□□□□ 0.1
TRIM41-209ENST00000515834 NEUROD1Q13562 356 aa15.63■□□□□ 0.09
TRIM41-209ENST00000515834 ARID3CA6NKF2 412 aa15.57■□□□□ 0.08
TRIM41-209ENST00000515834 RTL5Q5HYW3 569 aaPredicted RBP15.55■□□□□ 0.08
TRIM41-209ENST00000515834 HRCP23327 699 aa15.53■□□□□ 0.08
TRIM41-209ENST00000515834 ESF1Q9H501 851 aaKnown RBP15.5■□□□□ 0.07
TRIM41-209ENST00000515834 CANXP27824 592 aaKnown RBP15.5■□□□□ 0.07
TRIM41-209ENST00000515834 NEFMP07197 916 aa15.49■□□□□ 0.07
TRIM41-209ENST00000515834 ABCC9O60706 1549 aa15.43■□□□□ 0.06
TRIM41-209ENST00000515834 ZNF777Q9ULD5 760 aaPredicted RBP15.4■□□□□ 0.06
TRIM41-209ENST00000515834 STAG3Q9UJ98 1225 aa15.4■□□□□ 0.06
TRIM41-209ENST00000515834 P3H3Q8IVL6 736 aa15.39■□□□□ 0.05
TRIM41-209ENST00000515834 CHGAP10645 457 aaKnown RBP15.36■□□□□ 0.05
TRIM41-209ENST00000515834 SCAF1Q9H7N4 1312 aaKnown RBP15.33■□□□□ 0.04
TRIM41-209ENST00000515834 DIEXFQ68CQ4 756 aaKnown RBP15.32■□□□□ 0.04
TRIM41-209ENST00000515834 A0A0G2JS52 829 aa15.32■□□□□ 0.04
TRIM41-209ENST00000515834 ANP32CO43423 234 aa15.31■□□□□ 0.04
TRIM41-209ENST00000515834 NPM1P06748 294 aaKnown RBP eCLIP15.23■□□□□ 0.03
TRIM41-209ENST00000515834 PLEKHG5O94827 1062 aa15.23■□□□□ 0.03
TRIM41-209ENST00000515834 CDK11AQ9UQ88 783 aaPredicted RBP15.18■□□□□ 0.02
TRIM41-209ENST00000515834 SENP3Q9H4L4 574 aaPredicted RBP15.15■□□□□ 0.02
TRIM41-209ENST00000515834 ZBTB7CA1YPR0 619 aa15.14■□□□□ 0.01
TRIM41-209ENST00000515834 NPM2Q86SE8 214 aaKnown RBP15.11■□□□□ 0.01
TRIM41-209ENST00000515834 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.09■□□□□ 0.016e-9■■■■□ 23.1
TRIM41-209ENST00000515834 HSP90AA1P07900 732 aaKnown RBP15.07■□□□□ 0
TRIM41-209ENST00000515834 C14orf37Q86TY3 774 aa15.04■□□□□ -0
TRIM41-209ENST00000515834 SALL2Q9Y467 1007 aaPredicted RBP15.03■□□□□ -0
TRIM41-209ENST00000515834 HAP1P54257 671 aaPredicted RBP14.96□□□□□ -0.01
TRIM41-209ENST00000515834 ANP32AP39687 249 aaKnown RBP14.96□□□□□ -0.01
TRIM41-209ENST00000515834 ANP32BQ92688 251 aaKnown RBP14.94□□□□□ -0.02
TRIM41-209ENST00000515834 GTF3C3Q9Y5Q9 886 aa14.93□□□□□ -0.02
TRIM41-209ENST00000515834 ARXQ96QS3 562 aa14.92□□□□□ -0.02
TRIM41-209ENST00000515834 CHIC2Q9UKJ5 165 aa14.91□□□□□ -0.02
TRIM41-209ENST00000515834 KDM2AQ9Y2K7 1162 aa14.9□□□□□ -0.02
TRIM41-209ENST00000515834 ARID4BQ4LE39 1312 aaPredicted RBP14.89□□□□□ -0.03
TRIM41-209ENST00000515834 CDK11BP21127 795 aaKnown RBP14.89□□□□□ -0.03
TRIM41-209ENST00000515834 PPP1R15AO75807 674 aaPredicted RBP14.88□□□□□ -0.03
TRIM41-209ENST00000515834 FAM9BQ8IZU0 186 aa14.88□□□□□ -0.03
TRIM41-209ENST00000515834 UPF2Q9HAU5 1272 aaKnown RBP14.88□□□□□ -0.03
TRIM41-209ENST00000515834 TULP1O00294 542 aaPredicted RBP14.87□□□□□ -0.03
TRIM41-209ENST00000515834 TONSLQ96HA7 1378 aa14.85□□□□□ -0.03
TRIM41-209ENST00000515834 WDR43Q15061 677 aaKnown RBP eCLIP14.82□□□□□ -0.04
TRIM41-209ENST00000515834 KCNH8Q96L42 1107 aa14.82□□□□□ -0.04
TRIM41-209ENST00000515834 CHMP7Q8WUX9 453 aaPredicted RBP14.81□□□□□ -0.04
TRIM41-209ENST00000515834 CSRNP3Q8WYN3 585 aa14.81□□□□□ -0.04
TRIM41-209ENST00000515834 HNRNPUQ00839 825 aaKnown RBP eCLIP14.78□□□□□ -0.04
TRIM41-209ENST00000515834 TSPY4P0CV99 314 aa14.77□□□□□ -0.04
TRIM41-209ENST00000515834 TSPY10P0CW01 314 aa14.77□□□□□ -0.04
TRIM41-209ENST00000515834 TMC1Q8TDI8 760 aa14.77□□□□□ -0.04
TRIM41-209ENST00000515834 NPHP1O15259 732 aa14.77□□□□□ -0.05
TRIM41-209ENST00000515834 LMOD2Q6P5Q4 547 aa14.76□□□□□ -0.05
TRIM41-209ENST00000515834 MYH16Q9H6N6 1097 aa14.76□□□□□ -0.05
TRIM41-209ENST00000515834 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.76□□□□□ -0.05
TRIM41-209ENST00000515834 EIF5BO60841 1220 aaKnown RBP14.74□□□□□ -0.05
TRIM41-209ENST00000515834 FKBP8Q14318 412 aa14.73□□□□□ -0.05
TRIM41-209ENST00000515834 DDX10Q13206 875 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms