RNA–Protein interactions for RNA: ENST00000515812.5

GATB-213, Transcript of glutamyl-tRNA amidotransferase subunit B, humanhuman

TSL 5 BASIC

Gene GATB, Length 1,893 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATB-213ENST00000515812 NISCHQ9Y2I1 1504 aa38.38■■■■□ 3.73
GATB-213ENST00000515812 CCDC180Q9P1Z9 1646 aa33.02■■■□□ 2.88
GATB-213ENST00000515812 ZCCHC6Q5VYS8 1495 aaKnown RBP32.48■■■□□ 2.79
GATB-213ENST00000515812 SHROOM4Q9ULL8 1493 aa31.94■■■□□ 2.7
GATB-213ENST00000515812 DCAF1Q9Y4B6 1507 aa31.8■■■□□ 2.68
GATB-213ENST00000515812 SUPT5HO00267 1087 aaKnown RBP31.27■■■□□ 2.6
GATB-213ENST00000515812 DCAF8L2P0C7V8 631 aa31.23■■■□□ 2.59
GATB-213ENST00000515812 MYO15BQ96JP2 1530 aa31.04■■■□□ 2.56
GATB-213ENST00000515812 ABCC9O60706 1549 aa30.62■■■□□ 2.49
GATB-213ENST00000515812 CHIC1Q5VXU3 224 aa30.53■■■□□ 2.48
GATB-213ENST00000515812 NACADO15069 1562 aa30.5■■■□□ 2.47
GATB-213ENST00000515812 SCRIBQ14160 1630 aa30.44■■■□□ 2.46
GATB-213ENST00000515812 RSF1Q96T23 1441 aaPredicted RBP30.16■■■□□ 2.42
GATB-213ENST00000515812 RB1CC1Q8TDY2 1594 aa29.97■■■□□ 2.39
GATB-213ENST00000515812 CECR2Q9BXF3 1484 aa29.67■■■□□ 2.34
GATB-213ENST00000515812 MROH2BQ7Z745 1585 aa29.65■■■□□ 2.34
GATB-213ENST00000515812 BAZ1AQ9NRL2 1556 aaPredicted RBP29.58■■■□□ 2.33
GATB-213ENST00000515812 WIZO95785 1651 aa29.48■■■□□ 2.31
GATB-213ENST00000515812 UNC13AQ9UPW8 1703 aa29.4■■■□□ 2.3
GATB-213ENST00000515812 TRIM41Q8WV44 630 aa29.38■■■□□ 2.29
GATB-213ENST00000515812 LOC105371045A0A1W2PR82 267 aa29.34■■■□□ 2.29
GATB-213ENST00000515812 SMARCA4P51532 1647 aa29.29■■■□□ 2.28
GATB-213ENST00000515812 HRCP23327 699 aa29.25■■■□□ 2.27
GATB-213ENST00000515812 TOP2AP11388 1531 aaKnown RBP29.24■■■□□ 2.27
GATB-213ENST00000515812 EIF4G1Q04637 1599 aaKnown RBP29.2■■■□□ 2.27
GATB-213ENST00000515812 PCGF6Q9BYE7 350 aa29.17■■■□□ 2.26
GATB-213ENST00000515812 BICRAQ9NZM4 1560 aa29.01■■■□□ 2.23
GATB-213ENST00000515812 SMARCA2P51531 1590 aa28.98■■■□□ 2.23
GATB-213ENST00000515812 TRIM26Q12899 539 aaPredicted RBP28.97■■■□□ 2.23
GATB-213ENST00000515812 PEG3Q9GZU2 1588 aa28.93■■■□□ 2.22
GATB-213ENST00000515812 CCDC88BA6NC98 1476 aa28.92■■■□□ 2.22
GATB-213ENST00000515812 FAM9AQ8IZU1 332 aaPredicted RBP28.79■■■□□ 2.2
GATB-213ENST00000515812 ABCC8Q09428 1581 aa28.64■■■□□ 2.17
GATB-213ENST00000515812 PABPN1Q86U42 306 aaKnown RBP eCLIP28.62■■■□□ 2.17
GATB-213ENST00000515812 EEA1Q15075 1411 aa28.6■■■□□ 2.17
GATB-213ENST00000515812 ATAD2BQ9ULI0 1458 aa28.53■■■□□ 2.16
GATB-213ENST00000515812 ZEB1P37275 1124 aaPredicted RBP28.44■■■□□ 2.14
GATB-213ENST00000515812 BAZ1BQ9UIG0 1483 aaKnown RBP28.44■■■□□ 2.14
GATB-213ENST00000515812 WRNQ14191 1432 aaPredicted RBP eCLIP28.38■■■□□ 2.13
GATB-213ENST00000515812 TNIKQ9UKE5 1360 aa28.32■■■□□ 2.12
GATB-213ENST00000515812 SOGA1O94964 1423 aa28.31■■■□□ 2.12
GATB-213ENST00000515812 EHMT2Q96KQ7 1210 aa28.29■■■□□ 2.12
GATB-213ENST00000515812 PPARGC1BQ86YN6 1023 aaKnown RBP28.27■■■□□ 2.12
GATB-213ENST00000515812 CSRNP3Q8WYN3 585 aa28.24■■■□□ 2.11
GATB-213ENST00000515812 CEP162Q5TB80 1403 aa28.22■■■□□ 2.11
GATB-213ENST00000515812 GOLGA3Q08378 1498 aa28.21■■■□□ 2.11
GATB-213ENST00000515812 HMGXB3Q12766 1538 aa28.2■■■□□ 2.11
GATB-213ENST00000515812 SYNJ1O43426 1573 aa28.2■■■□□ 2.1
GATB-213ENST00000515812 KIF21BO75037 1637 aa28.15■■■□□ 2.1
GATB-213ENST00000515812 NCAPD3P42695 1498 aa28.11■■■□□ 2.09
GATB-213ENST00000515812 RUSC2Q8N2Y8 1516 aa28.11■■■□□ 2.09
GATB-213ENST00000515812 CEP164Q9UPV0 1460 aa28.11■■■□□ 2.09
GATB-213ENST00000515812 TOP2BQ02880 1626 aa28.04■■■□□ 2.08
GATB-213ENST00000515812 BIVM-ERCC5R4GMW8 1640 aa28.01■■■□□ 2.07
GATB-213ENST00000515812 UBTFP17480 764 aaKnown RBP27.95■■■□□ 2.06
GATB-213ENST00000515812 CFTRP13569 1480 aa27.79■■■□□ 2.04
GATB-213ENST00000515812 PRDM2Q13029 1718 aa27.77■■■□□ 2.04
GATB-213ENST00000515812 ERICH3Q5RHP9 1530 aa27.77■■■□□ 2.04
GATB-213ENST00000515812 CLIP1P30622 1438 aa27.76■■■□□ 2.03
GATB-213ENST00000515812 RAPGEF2Q9Y4G8 1499 aa27.71■■■□□ 2.03
GATB-213ENST00000515812 VPS8Q8N3P4 1428 aa27.7■■■□□ 2.03
GATB-213ENST00000515812 CUX1P39880 1505 aa27.68■■■□□ 2.02
GATB-213ENST00000515812 PRXQ9BXM0 1461 aa27.65■■■□□ 2.02
GATB-213ENST00000515812 CCER1Q8TC90 406 aaPredicted RBP27.61■■■□□ 2.01
GATB-213ENST00000515812 KIF27Q86VH2 1401 aa27.58■■■□□ 2.01
GATB-213ENST00000515812 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.55■■■□□ 2
GATB-213ENST00000515812 CADPSQ9ULU8 1353 aa27.45■■□□□ 1.99
GATB-213ENST00000515812 APLP2Q06481 763 aa27.44■■□□□ 1.98
GATB-213ENST00000515812 TTBK1Q5TCY1 1321 aaPredicted RBP27.4■■□□□ 1.98
GATB-213ENST00000515812 CC2D2AQ9P2K1 1620 aa27.37■■□□□ 1.97
GATB-213ENST00000515812 ARAP1Q96P48 1450 aa27.34■■□□□ 1.97
GATB-213ENST00000515812 CUX2O14529 1486 aa27.23■■□□□ 1.95
GATB-213ENST00000515812 FGD5Q6ZNL6 1462 aa27.21■■□□□ 1.95
GATB-213ENST00000515812 IGF1RP08069 1367 aa27.18■■□□□ 1.94
GATB-213ENST00000515812 FANCD2Q9BXW9 1451 aa27.16■■□□□ 1.94
GATB-213ENST00000515812 ARHGAP35Q9NRY4 1499 aa27.16■■□□□ 1.94
GATB-213ENST00000515812 DNMBPQ6XZF7 1577 aa27.14■■□□□ 1.93
GATB-213ENST00000515812 MAP3K1Q13233 1512 aa27.08■■□□□ 1.93
GATB-213ENST00000515812 RANGAP1P46060 587 aaPredicted RBP27.08■■□□□ 1.93
GATB-213ENST00000515812 CARMIL1Q5VZK9 1371 aa27.08■■□□□ 1.93
GATB-213ENST00000515812 HNRNPUL2Q1KMD3 747 aaKnown RBP27.06■■□□□ 1.92
GATB-213ENST00000515812 RRBP1Q9P2E9 1410 aaKnown RBP27.06■■□□□ 1.92
GATB-213ENST00000515812 CLSPNQ9HAW4 1339 aa27.04■■□□□ 1.92
GATB-213ENST00000515812 ABCA10Q8WWZ4 1543 aa27.03■■□□□ 1.92
GATB-213ENST00000515812 LAMC3Q9Y6N6 1575 aa27.02■■□□□ 1.92
GATB-213ENST00000515812 TOPBP1Q92547 1522 aa26.99■■□□□ 1.91
GATB-213ENST00000515812 DIEXFQ68CQ4 756 aaKnown RBP26.98■■□□□ 1.91
GATB-213ENST00000515812 CUL7Q14999 1698 aa26.97■■□□□ 1.91
GATB-213ENST00000515812 POLA1P09884 1462 aaPredicted RBP26.93■■□□□ 1.9
GATB-213ENST00000515812 ZNF316A6NFI3 1004 aaPredicted RBP26.93■■□□□ 1.9
GATB-213ENST00000515812 FHAD1B1AJZ9 1412 aa26.92■■□□□ 1.9
GATB-213ENST00000515812 KANK4Q5T7N3 995 aaPredicted RBP26.92■■□□□ 1.9
GATB-213ENST00000515812 TIAM1Q13009 1591 aa26.92■■□□□ 1.9
GATB-213ENST00000515812 EFCAB5A4FU69 1503 aa26.87■■□□□ 1.89
GATB-213ENST00000515812 CCNB3Q8WWL7 1395 aa26.86■■□□□ 1.89
GATB-213ENST00000515812 WDR97A6NE52 1622 aa26.86■■□□□ 1.89
GATB-213ENST00000515812 CFAP43Q8NDM7 1665 aa26.83■■□□□ 1.89
GATB-213ENST00000515812 NESP48681 1621 aa26.81■■□□□ 1.88
GATB-213ENST00000515812 RAD54L2Q9Y4B4 1467 aa26.81■■□□□ 1.88
GATB-213ENST00000515812 CTTNBP2Q8WZ74 1663 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms