RNA–Protein interactions for RNA: ENST00000513557.5

GYPB-214, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 277 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-214ENST00000513557 CHIC1Q5VXU3 224 aa16.53■□□□□ 0.24
GYPB-214ENST00000513557 AEBP2Q6ZN18 517 aaPredicted RBP16.48■□□□□ 0.23
GYPB-214ENST00000513557 PHF23Q9BUL5 403 aaPredicted RBP14.57□□□□□ -0.08
GYPB-214ENST00000513557 SENP3Q9H4L4 574 aaPredicted RBP13.94□□□□□ -0.18
GYPB-214ENST00000513557 PLPPR3Q6T4P5 718 aa13.63□□□□□ -0.23
GYPB-214ENST00000513557 FOXD1Q16676 465 aa12.87□□□□□ -0.35
GYPB-214ENST00000513557 ADRA2BP18089 450 aa12.75□□□□□ -0.37
GYPB-214ENST00000513557 PPP6R1Q9UPN7 881 aa12.72□□□□□ -0.37
GYPB-214ENST00000513557 KCNA4P22459 653 aa12.27□□□□□ -0.45
GYPB-214ENST00000513557 PIAS4Q8N2W9 510 aaPredicted RBP12.26□□□□□ -0.45
GYPB-214ENST00000513557 PPP4R3CPQ6ZMV5 832 aa12.06□□□□□ -0.48
GYPB-214ENST00000513557 EHMT2Q96KQ7 1210 aa11.94□□□□□ -0.5
GYPB-214ENST00000513557 NCBP3Q53F19 620 aaKnown RBP11.89□□□□□ -0.51
GYPB-214ENST00000513557 SLC4A1APQ9BWU0 796 aaKnown RBP11.78□□□□□ -0.52
GYPB-214ENST00000513557 MSH5O43196 834 aa11.71□□□□□ -0.53
GYPB-214ENST00000513557 SCAF1Q9H7N4 1312 aaKnown RBP11.68□□□□□ -0.54
GYPB-214ENST00000513557 NPM3O75607 178 aaKnown RBP11.68□□□□□ -0.54
GYPB-214ENST00000513557 CNKSR2Q8WXI2 1034 aa11.63□□□□□ -0.55
GYPB-214ENST00000513557 CSRNP3Q8WYN3 585 aa11.58□□□□□ -0.56
GYPB-214ENST00000513557 MAPK8IP2Q13387 824 aaPredicted RBP11.42□□□□□ -0.58
GYPB-214ENST00000513557 ZBTB22O15209 634 aa11.29□□□□□ -0.6
GYPB-214ENST00000513557 RNF216Q9NWF9 866 aaPredicted RBP11.29□□□□□ -0.6
GYPB-214ENST00000513557 DNAJC5BQ9UF47 199 aa11.27□□□□□ -0.61
GYPB-214ENST00000513557 DMRT2Q9Y5R5 561 aa11.19□□□□□ -0.62
GYPB-214ENST00000513557 FOXD4L1Q9NU39 408 aa11.17□□□□□ -0.62
GYPB-214ENST00000513557 HOXD11P31277 338 aaPredicted RBP11.12□□□□□ -0.63
GYPB-214ENST00000513557 SLC4A2P04920 1241 aa10.92□□□□□ -0.66
GYPB-214ENST00000513557 MYCNP04198 464 aaPredicted RBP10.8□□□□□ -0.68
GYPB-214ENST00000513557 ATXN8OSP0DMR3 200 aa10.74□□□□□ -0.69
GYPB-214ENST00000513557 DCAF8L1A6NGE4 600 aa10.71□□□□□ -0.69
GYPB-214ENST00000513557 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.63□□□□□ -0.71
GYPB-214ENST00000513557 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.52□□□□□ -0.73
GYPB-214ENST00000513557 HNRNPUL2Q1KMD3 747 aaKnown RBP10.52□□□□□ -0.73
GYPB-214ENST00000513557 SAMD1Q6SPF0 538 aaPredicted RBP10.5□□□□□ -0.73
GYPB-214ENST00000513557 U3KPZ7 1027 aaPredicted RBP10.48□□□□□ -0.73
GYPB-214ENST00000513557 FKBP8Q14318 412 aa10.46□□□□□ -0.73
GYPB-214ENST00000513557 ATF5Q9Y2D1 282 aaPredicted RBP10.46□□□□□ -0.73
GYPB-214ENST00000513557 APLP2Q06481 763 aa10.32□□□□□ -0.76
GYPB-214ENST00000513557 AMER1Q5JTC6 1135 aaPredicted RBP10.3□□□□□ -0.76
GYPB-214ENST00000513557 RTN4Q9NQC3 1192 aaKnown RBP10.28□□□□□ -0.76
GYPB-214ENST00000513557 ZNF219Q9P2Y4 722 aaPredicted RBP10.26□□□□□ -0.77
GYPB-214ENST00000513557 TRHP20396 242 aaPredicted RBP10.08□□□□□ -0.8
GYPB-214ENST00000513557 RNF39Q9H2S5 420 aa10.07□□□□□ -0.8
GYPB-214ENST00000513557 SPINK5Q9NQ38 1064 aaPredicted RBP10.06□□□□□ -0.8
GYPB-214ENST00000513557 SPDYE4A6NLX3 237 aa10.04□□□□□ -0.8
GYPB-214ENST00000513557 FBLN2P98095 1184 aa10.03□□□□□ -0.8
GYPB-214ENST00000513557 MKRN4PQ13434 485 aaPredicted RBP10.03□□□□□ -0.8
GYPB-214ENST00000513557 CAPN15O75808 1086 aa10.02□□□□□ -0.81
GYPB-214ENST00000513557 POLA2Q14181 598 aa10.01□□□□□ -0.81
GYPB-214ENST00000513557 SLC24A1O60721 1099 aa10□□□□□ -0.81
GYPB-214ENST00000513557 C1QBPQ07021 282 aaKnown RBP9.99□□□□□ -0.81
GYPB-214ENST00000513557 FBXO3Q9UK99 471 aa9.98□□□□□ -0.81
GYPB-214ENST00000513557 PROM2Q8N271 834 aa9.91□□□□□ -0.82
GYPB-214ENST00000513557 POTEDQ86YR6 584 aa9.89□□□□□ -0.83
GYPB-214ENST00000513557 ZBTB12Q9Y330 459 aaPredicted RBP9.89□□□□□ -0.83
GYPB-214ENST00000513557 ABCB7O75027 752 aa9.86□□□□□ -0.83
GYPB-214ENST00000513557 VASPP50552 380 aaPredicted RBP9.82□□□□□ -0.84
GYPB-214ENST00000513557 DSG3P32926 999 aa9.73□□□□□ -0.85
GYPB-214ENST00000513557 IFNLR1Q8IU57 520 aaPredicted RBP9.7□□□□□ -0.86
GYPB-214ENST00000513557 ZNF692Q9BU19 519 aaPredicted RBP9.68□□□□□ -0.86
GYPB-214ENST00000513557 SPDYE2BA6NHP3 402 aa9.65□□□□□ -0.86
GYPB-214ENST00000513557 SPDYE6P0CI01 402 aa9.65□□□□□ -0.86
GYPB-214ENST00000513557 SPDYE2Q495Y8 402 aa9.65□□□□□ -0.86
GYPB-214ENST00000513557 OSCARQ8IYS5 282 aa9.65□□□□□ -0.86
GYPB-214ENST00000513557 SSUH2Q9Y2M2 353 aa9.61□□□□□ -0.87
GYPB-214ENST00000513557 STAG3Q9UJ98 1225 aa9.6□□□□□ -0.87
GYPB-214ENST00000513557 KLHL34Q8N239 644 aa9.57□□□□□ -0.88
GYPB-214ENST00000513557 DCAF8L2P0C7V8 631 aa9.56□□□□□ -0.88
GYPB-214ENST00000513557 PABPN1Q86U42 306 aaKnown RBP eCLIP9.56□□□□□ -0.88
GYPB-214ENST00000513557 PKD2Q13563 968 aa9.55□□□□□ -0.88
GYPB-214ENST00000513557 SPOCK2Q92563 424 aa9.54□□□□□ -0.88
GYPB-214ENST00000513557 PLCD3Q8N3E9 789 aa9.52□□□□□ -0.89
GYPB-214ENST00000513557 CACNB1Q02641 598 aaPredicted RBP9.51□□□□□ -0.89
GYPB-214ENST00000513557 PLCB2Q00722 1185 aa9.5□□□□□ -0.89
GYPB-214ENST00000513557 MIER1Q8N108 512 aa9.48□□□□□ -0.89
GYPB-214ENST00000513557 ECM2O94769 699 aaPredicted RBP9.43□□□□□ -0.9
GYPB-214ENST00000513557 PLEKHG5O94827 1062 aa9.42□□□□□ -0.9
GYPB-214ENST00000513557 ZBTB47Q9UFB7 747 aaPredicted RBP9.39□□□□□ -0.91
GYPB-214ENST00000513557 HAP1P54257 671 aaPredicted RBP9.37□□□□□ -0.91
GYPB-214ENST00000513557 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.32□□□□□ -0.92
GYPB-214ENST00000513557 CIZ1Q9ULV3 898 aaPredicted RBP9.32□□□□□ -0.92
GYPB-214ENST00000513557 RGL2O15211 777 aa9.31□□□□□ -0.92
GYPB-214ENST00000513557 BBXQ8WY36 941 aaPredicted RBP9.31□□□□□ -0.92
GYPB-214ENST00000513557 RBM42Q9BTD8 480 aaKnown RBP9.29□□□□□ -0.92
GYPB-214ENST00000513557 NPM1P06748 294 aaKnown RBP eCLIP9.28□□□□□ -0.92
GYPB-214ENST00000513557 SPDYE1Q8NFV5 336 aaPredicted RBP9.26□□□□□ -0.93
GYPB-214ENST00000513557 TRIM41Q8WV44 630 aa9.25□□□□□ -0.93
GYPB-214ENST00000513557 AKT1S1Q96B36 256 aa9.25□□□□□ -0.93
GYPB-214ENST00000513557 PAXIP1Q6ZW49 1069 aaPredicted RBP9.23□□□□□ -0.93
GYPB-214ENST00000513557 VSIG10Q8N0Z9 540 aa9.23□□□□□ -0.93
GYPB-214ENST00000513557 CFAP44Q96MT7 982 aa9.21□□□□□ -0.94
GYPB-214ENST00000513557 CHGAP10645 457 aaKnown RBP9.2□□□□□ -0.94
GYPB-214ENST00000513557 GSE1Q14687 1217 aa9.2□□□□□ -0.94
GYPB-214ENST00000513557 CLEC11AQ9Y240 323 aa9.2□□□□□ -0.94
GYPB-214ENST00000513557 PRR29P0C7W0 189 aa9.18□□□□□ -0.94
GYPB-214ENST00000513557 NUBP1P53384 320 aa9.17□□□□□ -0.94
GYPB-214ENST00000513557 SPRYD3Q8NCJ5 442 aa9.17□□□□□ -0.94
GYPB-214ENST00000513557 REM2Q8IYK8 340 aaPredicted RBP9.16□□□□□ -0.94
GYPB-214ENST00000513557 DCAF8Q5TAQ9 597 aa9.15□□□□□ -0.94
GYPB-214ENST00000513557 BCANQ96GW7 911 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms