RNA–Protein interactions for RNA: ENST00000511853.1

DDX4-211, Transcript of DEAD-box helicase 4, humanhuman

TSL 2 BASIC

Gene DDX4, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-211ENST00000511853 CHIC1Q5VXU3 224 aa21.67■■□□□ 1.06
DDX4-211ENST00000511853 AEBP2Q6ZN18 517 aaPredicted RBP21.57■■□□□ 1.04
DDX4-211ENST00000511853 PHF23Q9BUL5 403 aaPredicted RBP19.37■□□□□ 0.69
DDX4-211ENST00000511853 PLPPR3Q6T4P5 718 aa17.9■□□□□ 0.46
DDX4-211ENST00000511853 SENP3Q9H4L4 574 aaPredicted RBP17.82■□□□□ 0.44
DDX4-211ENST00000511853 ADRA2BP18089 450 aa17.09■□□□□ 0.33
DDX4-211ENST00000511853 PPP6R1Q9UPN7 881 aa16.86■□□□□ 0.29
DDX4-211ENST00000511853 KCNA4P22459 653 aa16.75■□□□□ 0.27
DDX4-211ENST00000511853 EHMT2Q96KQ7 1210 aa16.7■□□□□ 0.26
DDX4-211ENST00000511853 FOXD1Q16676 465 aa16.66■□□□□ 0.26
DDX4-211ENST00000511853 CSRNP3Q8WYN3 585 aa16.06■□□□□ 0.16
DDX4-211ENST00000511853 PPP4R3CPQ6ZMV5 832 aa15.97■□□□□ 0.15
DDX4-211ENST00000511853 SLC4A1APQ9BWU0 796 aaKnown RBP15.95■□□□□ 0.14
DDX4-211ENST00000511853 PIAS4Q8N2W9 510 aaPredicted RBP15.86■□□□□ 0.13
DDX4-211ENST00000511853 NPM3O75607 178 aaKnown RBP15.66■□□□□ 0.1
DDX4-211ENST00000511853 NCBP3Q53F19 620 aaKnown RBP15.57■□□□□ 0.08
DDX4-211ENST00000511853 ZBTB22O15209 634 aa15.55■□□□□ 0.08
DDX4-211ENST00000511853 CNKSR2Q8WXI2 1034 aa15.23■□□□□ 0.03
DDX4-211ENST00000511853 MAPK8IP2Q13387 824 aaPredicted RBP15.07■□□□□ 0
DDX4-211ENST00000511853 SCAF1Q9H7N4 1312 aaKnown RBP14.98□□□□□ -0.01
DDX4-211ENST00000511853 FOXD4L1Q9NU39 408 aa14.96□□□□□ -0.01
DDX4-211ENST00000511853 DNAJC5BQ9UF47 199 aa14.8□□□□□ -0.04
DDX4-211ENST00000511853 RTN4Q9NQC3 1192 aaKnown RBP14.78□□□□□ -0.04
DDX4-211ENST00000511853 MSH5O43196 834 aa14.74□□□□□ -0.05
DDX4-211ENST00000511853 RNF216Q9NWF9 866 aaPredicted RBP14.73□□□□□ -0.05
DDX4-211ENST00000511853 SLC4A2P04920 1241 aa14.64□□□□□ -0.07
DDX4-211ENST00000511853 SLC24A1O60721 1099 aa14.62□□□□□ -0.07
DDX4-211ENST00000511853 HOXD11P31277 338 aaPredicted RBP14.47□□□□□ -0.09
DDX4-211ENST00000511853 AMER1Q5JTC6 1135 aaPredicted RBP14.47□□□□□ -0.09
DDX4-211ENST00000511853 DMRT2Q9Y5R5 561 aa14.43□□□□□ -0.1
DDX4-211ENST00000511853 FKBP8Q14318 412 aa14.4□□□□□ -0.1
DDX4-211ENST00000511853 MYCNP04198 464 aaPredicted RBP14.27□□□□□ -0.13
DDX4-211ENST00000511853 ATXN8OSP0DMR3 200 aa14.21□□□□□ -0.13
DDX4-211ENST00000511853 ATF5Q9Y2D1 282 aaPredicted RBP14.16□□□□□ -0.14
DDX4-211ENST00000511853 DCAF8L1A6NGE4 600 aa13.84□□□□□ -0.19
DDX4-211ENST00000511853 U3KPZ7 1027 aaPredicted RBP13.79□□□□□ -0.2
DDX4-211ENST00000511853 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.77□□□□□ -0.21
DDX4-211ENST00000511853 SAMD1Q6SPF0 538 aaPredicted RBP13.63□□□□□ -0.23
DDX4-211ENST00000511853 ZNF219Q9P2Y4 722 aaPredicted RBP13.57□□□□□ -0.24
DDX4-211ENST00000511853 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.56□□□□□ -0.24
DDX4-211ENST00000511853 HNRNPUL2Q1KMD3 747 aaKnown RBP13.56□□□□□ -0.24
DDX4-211ENST00000511853 MKRN4PQ13434 485 aaPredicted RBP13.51□□□□□ -0.25
DDX4-211ENST00000511853 SPDYE4A6NLX3 237 aa13.47□□□□□ -0.25
DDX4-211ENST00000511853 PLCB2Q00722 1185 aa13.45□□□□□ -0.26
DDX4-211ENST00000511853 IFNLR1Q8IU57 520 aaPredicted RBP13.38□□□□□ -0.27
DDX4-211ENST00000511853 PROM2Q8N271 834 aa13.38□□□□□ -0.27
DDX4-211ENST00000511853 VASPP50552 380 aaPredicted RBP13.37□□□□□ -0.27
DDX4-211ENST00000511853 FBXO3Q9UK99 471 aa13.36□□□□□ -0.27
DDX4-211ENST00000511853 HAP1P54257 671 aaPredicted RBP13.28□□□□□ -0.28
DDX4-211ENST00000511853 PKD2Q13563 968 aa13.27□□□□□ -0.28
DDX4-211ENST00000511853 DCAF8L2P0C7V8 631 aa13.27□□□□□ -0.29
DDX4-211ENST00000511853 SPINK5Q9NQ38 1064 aaPredicted RBP13.24□□□□□ -0.29
DDX4-211ENST00000511853 PRKCSHP14314 528 aaPredicted RBP13.22□□□□□ -0.29
DDX4-211ENST00000511853 TRHP20396 242 aaPredicted RBP13.18□□□□□ -0.3
DDX4-211ENST00000511853 POLA2Q14181 598 aa13.16□□□□□ -0.3
DDX4-211ENST00000511853 FBLN2P98095 1184 aa13.09□□□□□ -0.31
DDX4-211ENST00000511853 APLP2Q06481 763 aa13.09□□□□□ -0.31
DDX4-211ENST00000511853 NPM1P06748 294 aaKnown RBP eCLIP13.04□□□□□ -0.32
DDX4-211ENST00000511853 KDM2AQ9Y2K7 1162 aa13.03□□□□□ -0.32
DDX4-211ENST00000511853 BCANQ96GW7 911 aa13□□□□□ -0.33
DDX4-211ENST00000511853 TAOK2Q9UL54 1235 aa13□□□□□ -0.33
DDX4-211ENST00000511853 CAPN15O75808 1086 aa12.97□□□□□ -0.33
DDX4-211ENST00000511853 ABCB7O75027 752 aa12.94□□□□□ -0.34
DDX4-211ENST00000511853 VSIG10Q8N0Z9 540 aa12.94□□□□□ -0.34
DDX4-211ENST00000511853 ECM2O94769 699 aaPredicted RBP12.89□□□□□ -0.35
DDX4-211ENST00000511853 PAXIP1Q6ZW49 1069 aaPredicted RBP12.89□□□□□ -0.35
DDX4-211ENST00000511853 RGL2O15211 777 aa12.89□□□□□ -0.35
DDX4-211ENST00000511853 RNF39Q9H2S5 420 aa12.89□□□□□ -0.35
DDX4-211ENST00000511853 KLHL34Q8N239 644 aa12.87□□□□□ -0.35
DDX4-211ENST00000511853 CFAP44Q96MT7 982 aa12.87□□□□□ -0.35
DDX4-211ENST00000511853 SPOCK2Q92563 424 aa12.85□□□□□ -0.35
DDX4-211ENST00000511853 BBXQ8WY36 941 aaPredicted RBP12.84□□□□□ -0.35
DDX4-211ENST00000511853 TPRNQ4KMQ1 711 aa12.83□□□□□ -0.35
DDX4-211ENST00000511853 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.78□□□□□ -0.36
DDX4-211ENST00000511853 TSHZ2Q9NRE2 1034 aa12.78□□□□□ -0.36
DDX4-211ENST00000511853 OSCARQ8IYS5 282 aa12.74□□□□□ -0.37
DDX4-211ENST00000511853 ZNF692Q9BU19 519 aaPredicted RBP12.73□□□□□ -0.37
DDX4-211ENST00000511853 PLCD3Q8N3E9 789 aa12.71□□□□□ -0.37
DDX4-211ENST00000511853 ZBTB12Q9Y330 459 aaPredicted RBP12.68□□□□□ -0.38
DDX4-211ENST00000511853 MIER1Q8N108 512 aa12.65□□□□□ -0.38
DDX4-211ENST00000511853 PABPN1Q86U42 306 aaKnown RBP eCLIP12.65□□□□□ -0.38
DDX4-211ENST00000511853 SPRYD3Q8NCJ5 442 aa12.65□□□□□ -0.38
DDX4-211ENST00000511853 SSUH2Q9Y2M2 353 aa12.65□□□□□ -0.38
DDX4-211ENST00000511853 CHGAP10645 457 aaKnown RBP12.64□□□□□ -0.39
DDX4-211ENST00000511853 C1QBPQ07021 282 aaKnown RBP12.63□□□□□ -0.39
DDX4-211ENST00000511853 STAG3Q9UJ98 1225 aa12.61□□□□□ -0.39
DDX4-211ENST00000511853 CIZ1Q9ULV3 898 aaPredicted RBP12.6□□□□□ -0.39
DDX4-211ENST00000511853 DSG3P32926 999 aa12.6□□□□□ -0.39
DDX4-211ENST00000511853 SPDYE2BA6NHP3 402 aa12.55□□□□□ -0.4
DDX4-211ENST00000511853 SPDYE6P0CI01 402 aa12.55□□□□□ -0.4
DDX4-211ENST00000511853 SPDYE2Q495Y8 402 aa12.55□□□□□ -0.4
DDX4-211ENST00000511853 RNF25Q96BH1 459 aaPredicted RBP12.55□□□□□ -0.4
DDX4-211ENST00000511853 DNAJC5Q9H3Z4 198 aa12.47□□□□□ -0.41
DDX4-211ENST00000511853 NKX1-1Q15270 411 aaPredicted RBP12.45□□□□□ -0.42
DDX4-211ENST00000511853 HS6ST3Q8IZP7 471 aa12.42□□□□□ -0.42
DDX4-211ENST00000511853 POTEDQ86YR6 584 aa12.39□□□□□ -0.43
DDX4-211ENST00000511853 NBR1Q14596 966 aa12.34□□□□□ -0.43
DDX4-211ENST00000511853 GTPBP6O43824 516 aaPredicted RBP12.31□□□□□ -0.44
DDX4-211ENST00000511853 NUBP1P53384 320 aa12.3□□□□□ -0.44
DDX4-211ENST00000511853 ZBTB47Q9UFB7 747 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms