RNA–Protein interactions for RNA: ENST00000511014.6

LINC00461-212, long intergenic non-protein coding RNA 461, humanhuman

TSL 2 BASIC

Gene LINC00461, Length 3,539 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-212ENST00000511014 NISCHQ9Y2I1 1504 aa22.64■■□□□ 1.21
LINC00461-212ENST00000511014 CCDC180Q9P1Z9 1646 aa19.94■□□□□ 0.78
LINC00461-212ENST00000511014 ZCCHC6Q5VYS8 1495 aaKnown RBP19.28■□□□□ 0.68
LINC00461-212ENST00000511014 DCAF1Q9Y4B6 1507 aa19.11■□□□□ 0.65
LINC00461-212ENST00000511014 MYO15BQ96JP2 1530 aa18.73■□□□□ 0.59
LINC00461-212ENST00000511014 ABCC9O60706 1549 aa18.24■□□□□ 0.51
LINC00461-212ENST00000511014 NACADO15069 1562 aa18.1■□□□□ 0.49
LINC00461-212ENST00000511014 UNC13AQ9UPW8 1703 aa17.9■□□□□ 0.46
LINC00461-212ENST00000511014 SHROOM4Q9ULL8 1493 aa17.83■□□□□ 0.44
LINC00461-212ENST00000511014 SCRIBQ14160 1630 aa17.77■□□□□ 0.44
LINC00461-212ENST00000511014 EIF4G1Q04637 1599 aaKnown RBP17.73■□□□□ 0.43
LINC00461-212ENST00000511014 RB1CC1Q8TDY2 1594 aa17.68■□□□□ 0.42
LINC00461-212ENST00000511014 RSF1Q96T23 1441 aaPredicted RBP17.6■□□□□ 0.41
LINC00461-212ENST00000511014 BAZ1AQ9NRL2 1556 aaPredicted RBP17.57■□□□□ 0.4
LINC00461-212ENST00000511014 PEG3Q9GZU2 1588 aa17.47■□□□□ 0.39
LINC00461-212ENST00000511014 BICRAQ9NZM4 1560 aa17.46■□□□□ 0.39
LINC00461-212ENST00000511014 MROH2BQ7Z745 1585 aa17.42■□□□□ 0.38
LINC00461-212ENST00000511014 SMARCA4P51532 1647 aa17.39■□□□□ 0.37
LINC00461-212ENST00000511014 WIZO95785 1651 aa17.38■□□□□ 0.37
LINC00461-212ENST00000511014 CECR2Q9BXF3 1484 aa17.33■□□□□ 0.36
LINC00461-212ENST00000511014 CHIC1Q5VXU3 224 aa17.31■□□□□ 0.36
LINC00461-212ENST00000511014 TOP2AP11388 1531 aaKnown RBP17.29■□□□□ 0.36
LINC00461-212ENST00000511014 SUPT5HO00267 1087 aaKnown RBP17.21■□□□□ 0.35
LINC00461-212ENST00000511014 SMARCA2P51531 1590 aa17.18■□□□□ 0.34
LINC00461-212ENST00000511014 DCAF8L2P0C7V8 631 aa16.96■□□□□ 0.31
LINC00461-212ENST00000511014 PRDM2Q13029 1718 aa16.94■□□□□ 0.3
LINC00461-212ENST00000511014 CCDC88BA6NC98 1476 aa16.89■□□□□ 0.29
LINC00461-212ENST00000511014 HMGXB3Q12766 1538 aa16.84■□□□□ 0.29
LINC00461-212ENST00000511014 BIVM-ERCC5R4GMW8 1640 aa16.79■□□□□ 0.28
LINC00461-212ENST00000511014 ATAD2BQ9ULI0 1458 aa16.75■□□□□ 0.27
LINC00461-212ENST00000511014 KIF21BO75037 1637 aa16.65■□□□□ 0.26
LINC00461-212ENST00000511014 ABCC8Q09428 1581 aa16.64■□□□□ 0.25
LINC00461-212ENST00000511014 SYNJ1O43426 1573 aa16.64■□□□□ 0.25
LINC00461-212ENST00000511014 TOP2BQ02880 1626 aa16.62■□□□□ 0.25
LINC00461-212ENST00000511014 NCAPD3P42695 1498 aa16.61■□□□□ 0.25
LINC00461-212ENST00000511014 EEA1Q15075 1411 aa16.57■□□□□ 0.24
LINC00461-212ENST00000511014 WRNQ14191 1432 aaPredicted RBP eCLIP16.56■□□□□ 0.24
LINC00461-212ENST00000511014 BAZ1BQ9UIG0 1483 aaKnown RBP16.49■□□□□ 0.23
LINC00461-212ENST00000511014 ERICH3Q5RHP9 1530 aa16.38■□□□□ 0.21
LINC00461-212ENST00000511014 CFTRP13569 1480 aa16.37■□□□□ 0.21
LINC00461-212ENST00000511014 HRCP23327 699 aa16.37■□□□□ 0.21
LINC00461-212ENST00000511014 LOC105371045A0A1W2PR82 267 aa16.36■□□□□ 0.21
LINC00461-212ENST00000511014 TRIM41Q8WV44 630 aa16.33■□□□□ 0.2
LINC00461-212ENST00000511014 WDR97A6NE52 1622 aa16.32■□□□□ 0.2
LINC00461-212ENST00000511014 TNIKQ9UKE5 1360 aa16.32■□□□□ 0.2
LINC00461-212ENST00000511014 SOGA1O94964 1423 aa16.31■□□□□ 0.2
LINC00461-212ENST00000511014 CUX1P39880 1505 aa16.31■□□□□ 0.2
LINC00461-212ENST00000511014 RUSC2Q8N2Y8 1516 aa16.31■□□□□ 0.2
LINC00461-212ENST00000511014 GOLGA3Q08378 1498 aa16.25■□□□□ 0.19
LINC00461-212ENST00000511014 PRXQ9BXM0 1461 aa16.23■□□□□ 0.19
LINC00461-212ENST00000511014 CEP164Q9UPV0 1460 aa16.22■□□□□ 0.19
LINC00461-212ENST00000511014 CC2D2AQ9P2K1 1620 aa16.19■□□□□ 0.18
LINC00461-212ENST00000511014 TRIM26Q12899 539 aaPredicted RBP16.18■□□□□ 0.18
LINC00461-212ENST00000511014 CEP162Q5TB80 1403 aa16.18■□□□□ 0.18
LINC00461-212ENST00000511014 PABPN1Q86U42 306 aaKnown RBP eCLIP16.13■□□□□ 0.17
LINC00461-212ENST00000511014 DNMBPQ6XZF7 1577 aa16.04■□□□□ 0.16
LINC00461-212ENST00000511014 RAPGEF2Q9Y4G8 1499 aa16.03■□□□□ 0.16
LINC00461-212ENST00000511014 LAMC3Q9Y6N6 1575 aa16.03■□□□□ 0.16
LINC00461-212ENST00000511014 MAP3K1Q13233 1512 aa16■□□□□ 0.15
LINC00461-212ENST00000511014 ABCA5Q8WWZ7 1642 aa16■□□□□ 0.15
LINC00461-212ENST00000511014 ARAP1Q96P48 1450 aa16■□□□□ 0.15
LINC00461-212ENST00000511014 CFAP43Q8NDM7 1665 aa16■□□□□ 0.15
LINC00461-212ENST00000511014 CTTNBP2Q8WZ74 1663 aa15.99■□□□□ 0.15
LINC00461-212ENST00000511014 CUL7Q14999 1698 aa15.99■□□□□ 0.15
LINC00461-212ENST00000511014 PCGF6Q9BYE7 350 aa15.98■□□□□ 0.15
LINC00461-212ENST00000511014 VPS8Q8N3P4 1428 aa15.96■□□□□ 0.15
LINC00461-212ENST00000511014 CSRNP3Q8WYN3 585 aa15.96■□□□□ 0.15
LINC00461-212ENST00000511014 CADPSQ9ULU8 1353 aa15.93■□□□□ 0.14
LINC00461-212ENST00000511014 ABCA10Q8WWZ4 1543 aa15.93■□□□□ 0.14
LINC00461-212ENST00000511014 KIF21AQ7Z4S6 1674 aa15.92■□□□□ 0.14
LINC00461-212ENST00000511014 CUX2O14529 1486 aa15.91■□□□□ 0.14
LINC00461-212ENST00000511014 CLIP1P30622 1438 aa15.9■□□□□ 0.14
LINC00461-212ENST00000511014 TARBP1Q13395 1621 aaKnown RBP15.88■□□□□ 0.13
LINC00461-212ENST00000511014 LRRIQ1Q96JM4 1722 aa15.87■□□□□ 0.13
LINC00461-212ENST00000511014 SAMD9Q5K651 1589 aa15.86■□□□□ 0.13
LINC00461-212ENST00000511014 FGD5Q6ZNL6 1462 aa15.84■□□□□ 0.13
LINC00461-212ENST00000511014 KIF27Q86VH2 1401 aa15.83■□□□□ 0.12
LINC00461-212ENST00000511014 TOPBP1Q92547 1522 aa15.82■□□□□ 0.12
LINC00461-212ENST00000511014 ARHGAP35Q9NRY4 1499 aa15.82■□□□□ 0.12
LINC00461-212ENST00000511014 PBRM1Q86U86 1689 aa15.79■□□□□ 0.12
LINC00461-212ENST00000511014 FANCD2Q9BXW9 1451 aa15.79■□□□□ 0.12
LINC00461-212ENST00000511014 EFCAB5A4FU69 1503 aa15.78■□□□□ 0.12
LINC00461-212ENST00000511014 RRBP1Q9P2E9 1410 aaKnown RBP15.76■□□□□ 0.11
LINC00461-212ENST00000511014 URB2Q14146 1524 aaKnown RBP15.76■□□□□ 0.11
LINC00461-212ENST00000511014 POLA1P09884 1462 aaPredicted RBP15.76■□□□□ 0.11
LINC00461-212ENST00000511014 TIAM1Q13009 1591 aa15.76■□□□□ 0.11
LINC00461-212ENST00000511014 ZEB1P37275 1124 aaPredicted RBP15.75■□□□□ 0.11
LINC00461-212ENST00000511014 AQRO60306 1485 aaKnown RBP eCLIP15.75■□□□□ 0.11
LINC00461-212ENST00000511014 IGF1RP08069 1367 aa15.74■□□□□ 0.11
LINC00461-212ENST00000511014 THOC2Q8NI27 1593 aaKnown RBP15.73■□□□□ 0.11
LINC00461-212ENST00000511014 FAM9AQ8IZU1 332 aaPredicted RBP15.71■□□□□ 0.1
LINC00461-212ENST00000511014 PCF11O94913 1555 aaKnown RBP15.67■□□□□ 0.1
LINC00461-212ENST00000511014 SNAPC4Q5SXM2 1469 aa15.64■□□□□ 0.09
LINC00461-212ENST00000511014 WDR62O43379 1518 aa15.63■□□□□ 0.09
LINC00461-212ENST00000511014 ARHGEF11O15085 1522 aa15.63■□□□□ 0.09
LINC00461-212ENST00000511014 NESP48681 1621 aa15.62■□□□□ 0.09
LINC00461-212ENST00000511014 PPARGC1BQ86YN6 1023 aaKnown RBP15.62■□□□□ 0.09
LINC00461-212ENST00000511014 ADAMTS12P58397 1594 aa15.62■□□□□ 0.09
LINC00461-212ENST00000511014 FYCO1Q9BQS8 1478 aa15.6■□□□□ 0.09
LINC00461-212ENST00000511014 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms