RNA–Protein interactions for RNA: ENST00000510841.1

LRBA-210, Transcript of LPS responsive beige-like anchor protein, humanhuman

TSL 2

Gene LRBA, Length 2,288 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRBA-210ENST00000510841 NISCHQ9Y2I1 1504 aa34.49■■■■□ 3.11
LRBA-210ENST00000510841 CCDC180Q9P1Z9 1646 aa29.51■■■□□ 2.31
LRBA-210ENST00000510841 ZCCHC6Q5VYS8 1495 aaKnown RBP29.2■■■□□ 2.27
LRBA-210ENST00000510841 SHROOM4Q9ULL8 1493 aa29.11■■■□□ 2.25
LRBA-210ENST00000510841 SUPT5HO00267 1087 aaKnown RBP28.49■■■□□ 2.15
LRBA-210ENST00000510841 DCAF1Q9Y4B6 1507 aa28.41■■■□□ 2.14
LRBA-210ENST00000510841 DCAF8L2P0C7V8 631 aa28.25■■■□□ 2.11
LRBA-210ENST00000510841 CHIC1Q5VXU3 224 aa27.78■■■□□ 2.04
LRBA-210ENST00000510841 MYO15BQ96JP2 1530 aa27.73■■■□□ 2.03
LRBA-210ENST00000510841 ABCC9O60706 1549 aa27.59■■■□□ 2.01
LRBA-210ENST00000510841 SCRIBQ14160 1630 aa27.47■■□□□ 1.99
LRBA-210ENST00000510841 RSF1Q96T23 1441 aaPredicted RBP27.21■■□□□ 1.95
LRBA-210ENST00000510841 NACADO15069 1562 aa27.2■■□□□ 1.95
LRBA-210ENST00000510841 RB1CC1Q8TDY2 1594 aa26.99■■□□□ 1.91
LRBA-210ENST00000510841 LOC105371045A0A1W2PR82 267 aa26.85■■□□□ 1.89
LRBA-210ENST00000510841 HRCP23327 699 aa26.85■■□□□ 1.89
LRBA-210ENST00000510841 CECR2Q9BXF3 1484 aa26.81■■□□□ 1.88
LRBA-210ENST00000510841 PCGF6Q9BYE7 350 aa26.77■■□□□ 1.88
LRBA-210ENST00000510841 MROH2BQ7Z745 1585 aa26.77■■□□□ 1.88
LRBA-210ENST00000510841 WIZO95785 1651 aa26.65■■□□□ 1.86
LRBA-210ENST00000510841 TRIM41Q8WV44 630 aa26.6■■□□□ 1.85
LRBA-210ENST00000510841 BAZ1AQ9NRL2 1556 aaPredicted RBP26.57■■□□□ 1.84
LRBA-210ENST00000510841 UNC13AQ9UPW8 1703 aa26.43■■□□□ 1.82
LRBA-210ENST00000510841 EIF4G1Q04637 1599 aaKnown RBP26.4■■□□□ 1.82
LRBA-210ENST00000510841 TRIM26Q12899 539 aaPredicted RBP26.37■■□□□ 1.81
LRBA-210ENST00000510841 SMARCA4P51532 1647 aa26.32■■□□□ 1.8
LRBA-210ENST00000510841 FAM9AQ8IZU1 332 aaPredicted RBP26.29■■□□□ 1.8
LRBA-210ENST00000510841 TOP2AP11388 1531 aaKnown RBP26.29■■□□□ 1.8
LRBA-210ENST00000510841 PPARGC1BQ86YN6 1023 aaKnown RBP26.18■■□□□ 1.78
LRBA-210ENST00000510841 SMARCA2P51531 1590 aa26.12■■□□□ 1.77
LRBA-210ENST00000510841 CCDC88BA6NC98 1476 aa26.08■■□□□ 1.77
LRBA-210ENST00000510841 BICRAQ9NZM4 1560 aa26.02■■□□□ 1.76
LRBA-210ENST00000510841 ABCC8Q09428 1581 aa25.99■■□□□ 1.75
LRBA-210ENST00000510841 EHMT2Q96KQ7 1210 aa25.98■■□□□ 1.75
LRBA-210ENST00000510841 PEG3Q9GZU2 1588 aa25.87■■□□□ 1.73
LRBA-210ENST00000510841 ZEB1P37275 1124 aaPredicted RBP25.81■■□□□ 1.72
LRBA-210ENST00000510841 PABPN1Q86U42 306 aaKnown RBP eCLIP25.79■■□□□ 1.72
LRBA-210ENST00000510841 SOGA1O94964 1423 aa25.68■■□□□ 1.7
LRBA-210ENST00000510841 EEA1Q15075 1411 aa25.67■■□□□ 1.7
LRBA-210ENST00000510841 WRNQ14191 1432 aaPredicted RBP eCLIP25.61■■□□□ 1.69
LRBA-210ENST00000510841 CEP162Q5TB80 1403 aa25.58■■□□□ 1.69
LRBA-210ENST00000510841 ATAD2BQ9ULI0 1458 aa25.58■■□□□ 1.69
LRBA-210ENST00000510841 TNIKQ9UKE5 1360 aa25.56■■□□□ 1.68
LRBA-210ENST00000510841 RUSC2Q8N2Y8 1516 aa25.56■■□□□ 1.68
LRBA-210ENST00000510841 BAZ1BQ9UIG0 1483 aaKnown RBP25.51■■□□□ 1.67
LRBA-210ENST00000510841 SYNJ1O43426 1573 aa25.5■■□□□ 1.67
LRBA-210ENST00000510841 CSRNP3Q8WYN3 585 aa25.5■■□□□ 1.67
LRBA-210ENST00000510841 GOLGA3Q08378 1498 aa25.46■■□□□ 1.67
LRBA-210ENST00000510841 KIF21BO75037 1637 aa25.38■■□□□ 1.65
LRBA-210ENST00000510841 CEP164Q9UPV0 1460 aa25.33■■□□□ 1.64
LRBA-210ENST00000510841 UBTFP17480 764 aaKnown RBP25.32■■□□□ 1.64
LRBA-210ENST00000510841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.25■■□□□ 1.63
LRBA-210ENST00000510841 TOP2BQ02880 1626 aa25.23■■□□□ 1.63
LRBA-210ENST00000510841 CCER1Q8TC90 406 aaPredicted RBP25.2■■□□□ 1.62
LRBA-210ENST00000510841 BIVM-ERCC5R4GMW8 1640 aa25.2■■□□□ 1.62
LRBA-210ENST00000510841 HMGXB3Q12766 1538 aa25.19■■□□□ 1.62
LRBA-210ENST00000510841 TTBK1Q5TCY1 1321 aaPredicted RBP25.17■■□□□ 1.62
LRBA-210ENST00000510841 NCAPD3P42695 1498 aa25.11■■□□□ 1.61
LRBA-210ENST00000510841 CLIP1P30622 1438 aa25.11■■□□□ 1.61
LRBA-210ENST00000510841 RAPGEF2Q9Y4G8 1499 aa25.09■■□□□ 1.61
LRBA-210ENST00000510841 VPS8Q8N3P4 1428 aa25.04■■□□□ 1.6
LRBA-210ENST00000510841 ERICH3Q5RHP9 1530 aa24.97■■□□□ 1.59
LRBA-210ENST00000510841 CUX1P39880 1505 aa24.94■■□□□ 1.58
LRBA-210ENST00000510841 PRXQ9BXM0 1461 aa24.92■■□□□ 1.58
LRBA-210ENST00000510841 CFTRP13569 1480 aa24.9■■□□□ 1.58
LRBA-210ENST00000510841 PRDM2Q13029 1718 aa24.89■■□□□ 1.57
LRBA-210ENST00000510841 KIF27Q86VH2 1401 aa24.78■■□□□ 1.56
LRBA-210ENST00000510841 ARAP1Q96P48 1450 aa24.77■■□□□ 1.56
LRBA-210ENST00000510841 APLP2Q06481 763 aa24.76■■□□□ 1.55
LRBA-210ENST00000510841 RANGAP1P46060 587 aaPredicted RBP24.72■■□□□ 1.55
LRBA-210ENST00000510841 HNRNPUL2Q1KMD3 747 aaKnown RBP24.7■■□□□ 1.55
LRBA-210ENST00000510841 DIEXFQ68CQ4 756 aaKnown RBP24.69■■□□□ 1.54
LRBA-210ENST00000510841 SCAF1Q9H7N4 1312 aaKnown RBP24.64■■□□□ 1.54
LRBA-210ENST00000510841 CADPSQ9ULU8 1353 aa24.58■■□□□ 1.52
LRBA-210ENST00000510841 ZNF316A6NFI3 1004 aaPredicted RBP24.56■■□□□ 1.52
LRBA-210ENST00000510841 ARHGAP35Q9NRY4 1499 aa24.55■■□□□ 1.52
LRBA-210ENST00000510841 CUX2O14529 1486 aa24.53■■□□□ 1.52
LRBA-210ENST00000510841 CC2D2AQ9P2K1 1620 aa24.51■■□□□ 1.51
LRBA-210ENST00000510841 FGD5Q6ZNL6 1462 aa24.49■■□□□ 1.51
LRBA-210ENST00000510841 KANK4Q5T7N3 995 aaPredicted RBP24.48■■□□□ 1.51
LRBA-210ENST00000510841 ACIN1Q9UKV3 1341 aaKnown RBP24.48■■□□□ 1.51
LRBA-210ENST00000510841 IGF1RP08069 1367 aa24.47■■□□□ 1.51
LRBA-210ENST00000510841 RRBP1Q9P2E9 1410 aaKnown RBP24.46■■□□□ 1.51
LRBA-210ENST00000510841 NEUROD1Q13562 356 aa24.41■■□□□ 1.5
LRBA-210ENST00000510841 CLSPNQ9HAW4 1339 aa24.37■■□□□ 1.49
LRBA-210ENST00000510841 DHX57Q6P158 1386 aaKnown RBP24.37■■□□□ 1.49
LRBA-210ENST00000510841 FANCD2Q9BXW9 1451 aa24.36■■□□□ 1.49
LRBA-210ENST00000510841 CARMIL1Q5VZK9 1371 aa24.36■■□□□ 1.49
LRBA-210ENST00000510841 CENPBP07199 599 aaPredicted RBP24.35■■□□□ 1.49
LRBA-210ENST00000510841 MAP3K1Q13233 1512 aa24.34■■□□□ 1.49
LRBA-210ENST00000510841 TIAM1Q13009 1591 aa24.33■■□□□ 1.49
LRBA-210ENST00000510841 DNMBPQ6XZF7 1577 aa24.32■■□□□ 1.48
LRBA-210ENST00000510841 CCNB3Q8WWL7 1395 aa24.3■■□□□ 1.48
LRBA-210ENST00000510841 ABCA10Q8WWZ4 1543 aa24.24■■□□□ 1.47
LRBA-210ENST00000510841 CFAP43Q8NDM7 1665 aa24.23■■□□□ 1.47
LRBA-210ENST00000510841 TOPBP1Q92547 1522 aa24.22■■□□□ 1.47
LRBA-210ENST00000510841 POLA1P09884 1462 aaPredicted RBP24.2■■□□□ 1.47
LRBA-210ENST00000510841 LRRC9Q6ZRR7 1453 aa24.19■■□□□ 1.46
LRBA-210ENST00000510841 RAD54L2Q9Y4B4 1467 aa24.19■■□□□ 1.46
LRBA-210ENST00000510841 PCF11O94913 1555 aaKnown RBP24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms