RNA–Protein interactions for RNA: ENST00000510105.5

SMARCAD1-207, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 5

Gene SMARCAD1, Length 2,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-207ENST00000510105 NISCHQ9Y2I1 1504 aa32.44■■■□□ 2.78
SMARCAD1-207ENST00000510105 SHROOM4Q9ULL8 1493 aa27.75■■■□□ 2.03
SMARCAD1-207ENST00000510105 CCDC180Q9P1Z9 1646 aa27.55■■■□□ 2
SMARCAD1-207ENST00000510105 ZCCHC6Q5VYS8 1495 aaKnown RBP27.45■■□□□ 1.98
SMARCAD1-207ENST00000510105 SUPT5HO00267 1087 aaKnown RBP27.19■■□□□ 1.94
SMARCAD1-207ENST00000510105 DCAF8L2P0C7V8 631 aa26.93■■□□□ 1.9
SMARCAD1-207ENST00000510105 DCAF1Q9Y4B6 1507 aa26.56■■□□□ 1.84
SMARCAD1-207ENST00000510105 CHIC1Q5VXU3 224 aa26.43■■□□□ 1.82
SMARCAD1-207ENST00000510105 MYO15BQ96JP2 1530 aa26.39■■□□□ 1.82
SMARCAD1-207ENST00000510105 ABCC9O60706 1549 aa25.91■■□□□ 1.74
SMARCAD1-207ENST00000510105 SCRIBQ14160 1630 aa25.89■■□□□ 1.74
SMARCAD1-207ENST00000510105 RSF1Q96T23 1441 aaPredicted RBP25.69■■□□□ 1.7
SMARCAD1-207ENST00000510105 LOC105371045A0A1W2PR82 267 aa25.69■■□□□ 1.7
SMARCAD1-207ENST00000510105 PCGF6Q9BYE7 350 aa25.64■■□□□ 1.7
SMARCAD1-207ENST00000510105 HRCP23327 699 aa25.63■■□□□ 1.69
SMARCAD1-207ENST00000510105 RB1CC1Q8TDY2 1594 aa25.46■■□□□ 1.67
SMARCAD1-207ENST00000510105 NACADO15069 1562 aa25.45■■□□□ 1.67
SMARCAD1-207ENST00000510105 CECR2Q9BXF3 1484 aa25.35■■□□□ 1.65
SMARCAD1-207ENST00000510105 TRIM41Q8WV44 630 aa25.28■■□□□ 1.64
SMARCAD1-207ENST00000510105 MROH2BQ7Z745 1585 aa25.26■■□□□ 1.63
SMARCAD1-207ENST00000510105 PPARGC1BQ86YN6 1023 aaKnown RBP25.17■■□□□ 1.62
SMARCAD1-207ENST00000510105 WIZO95785 1651 aa25.15■■□□□ 1.62
SMARCAD1-207ENST00000510105 FAM9AQ8IZU1 332 aaPredicted RBP25.14■■□□□ 1.62
SMARCAD1-207ENST00000510105 TRIM26Q12899 539 aaPredicted RBP25.11■■□□□ 1.61
SMARCAD1-207ENST00000510105 EHMT2Q96KQ7 1210 aa24.96■■□□□ 1.59
SMARCAD1-207ENST00000510105 BAZ1AQ9NRL2 1556 aaPredicted RBP24.94■■□□□ 1.58
SMARCAD1-207ENST00000510105 EIF4G1Q04637 1599 aaKnown RBP24.79■■□□□ 1.56
SMARCAD1-207ENST00000510105 UNC13AQ9UPW8 1703 aa24.77■■□□□ 1.56
SMARCAD1-207ENST00000510105 SMARCA4P51532 1647 aa24.71■■□□□ 1.55
SMARCAD1-207ENST00000510105 TOP2AP11388 1531 aaKnown RBP24.69■■□□□ 1.54
SMARCAD1-207ENST00000510105 CCDC88BA6NC98 1476 aa24.61■■□□□ 1.53
SMARCAD1-207ENST00000510105 ABCC8Q09428 1581 aa24.6■■□□□ 1.53
SMARCAD1-207ENST00000510105 SMARCA2P51531 1590 aa24.58■■□□□ 1.53
SMARCAD1-207ENST00000510105 ZEB1P37275 1124 aaPredicted RBP24.5■■□□□ 1.51
SMARCAD1-207ENST00000510105 PABPN1Q86U42 306 aaKnown RBP eCLIP24.47■■□□□ 1.51
SMARCAD1-207ENST00000510105 BICRAQ9NZM4 1560 aa24.42■■□□□ 1.5
SMARCAD1-207ENST00000510105 SOGA1O94964 1423 aa24.35■■□□□ 1.49
SMARCAD1-207ENST00000510105 RUSC2Q8N2Y8 1516 aa24.26■■□□□ 1.47
SMARCAD1-207ENST00000510105 CEP162Q5TB80 1403 aa24.22■■□□□ 1.47
SMARCAD1-207ENST00000510105 PEG3Q9GZU2 1588 aa24.21■■□□□ 1.47
SMARCAD1-207ENST00000510105 CSRNP3Q8WYN3 585 aa24.17■■□□□ 1.46
SMARCAD1-207ENST00000510105 TTBK1Q5TCY1 1321 aaPredicted RBP24.16■■□□□ 1.46
SMARCAD1-207ENST00000510105 WRNQ14191 1432 aaPredicted RBP eCLIP24.16■■□□□ 1.46
SMARCAD1-207ENST00000510105 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.16■■□□□ 1.46
SMARCAD1-207ENST00000510105 TNIKQ9UKE5 1360 aa24.16■■□□□ 1.46
SMARCAD1-207ENST00000510105 EEA1Q15075 1411 aa24.13■■□□□ 1.45
SMARCAD1-207ENST00000510105 UBTFP17480 764 aaKnown RBP24.09■■□□□ 1.45
SMARCAD1-207ENST00000510105 ATAD2BQ9ULI0 1458 aa24.06■■□□□ 1.44
SMARCAD1-207ENST00000510105 CCER1Q8TC90 406 aaPredicted RBP24.05■■□□□ 1.44
SMARCAD1-207ENST00000510105 SYNJ1O43426 1573 aa24.04■■□□□ 1.44
SMARCAD1-207ENST00000510105 GOLGA3Q08378 1498 aa24.02■■□□□ 1.44
SMARCAD1-207ENST00000510105 BAZ1BQ9UIG0 1483 aaKnown RBP24■■□□□ 1.43
SMARCAD1-207ENST00000510105 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
SMARCAD1-207ENST00000510105 KIF21BO75037 1637 aa23.86■■□□□ 1.41
SMARCAD1-207ENST00000510105 CLIP1P30622 1438 aa23.76■■□□□ 1.39
SMARCAD1-207ENST00000510105 RAPGEF2Q9Y4G8 1499 aa23.75■■□□□ 1.39
SMARCAD1-207ENST00000510105 TOP2BQ02880 1626 aa23.71■■□□□ 1.39
SMARCAD1-207ENST00000510105 RANGAP1P46060 587 aaPredicted RBP23.67■■□□□ 1.38
SMARCAD1-207ENST00000510105 SCAF1Q9H7N4 1312 aaKnown RBP23.65■■□□□ 1.38
SMARCAD1-207ENST00000510105 VPS8Q8N3P4 1428 aa23.65■■□□□ 1.38
SMARCAD1-207ENST00000510105 BIVM-ERCC5R4GMW8 1640 aa23.63■■□□□ 1.37
SMARCAD1-207ENST00000510105 HNRNPUL2Q1KMD3 747 aaKnown RBP23.6■■□□□ 1.37
SMARCAD1-207ENST00000510105 DIEXFQ68CQ4 756 aaKnown RBP23.59■■□□□ 1.37
SMARCAD1-207ENST00000510105 NCAPD3P42695 1498 aa23.56■■□□□ 1.36
SMARCAD1-207ENST00000510105 HMGXB3Q12766 1538 aa23.56■■□□□ 1.36
SMARCAD1-207ENST00000510105 APLP2Q06481 763 aa23.51■■□□□ 1.35
SMARCAD1-207ENST00000510105 CUX1P39880 1505 aa23.5■■□□□ 1.35
SMARCAD1-207ENST00000510105 PRXQ9BXM0 1461 aa23.48■■□□□ 1.35
SMARCAD1-207ENST00000510105 ERICH3Q5RHP9 1530 aa23.46■■□□□ 1.35
SMARCAD1-207ENST00000510105 ZNF316A6NFI3 1004 aaPredicted RBP23.4■■□□□ 1.34
SMARCAD1-207ENST00000510105 NEUROD1Q13562 356 aa23.4■■□□□ 1.34
SMARCAD1-207ENST00000510105 ARAP1Q96P48 1450 aa23.4■■□□□ 1.34
SMARCAD1-207ENST00000510105 CFTRP13569 1480 aa23.4■■□□□ 1.34
SMARCAD1-207ENST00000510105 ACIN1Q9UKV3 1341 aaKnown RBP23.39■■□□□ 1.34
SMARCAD1-207ENST00000510105 KIF27Q86VH2 1401 aa23.35■■□□□ 1.33
SMARCAD1-207ENST00000510105 KANK4Q5T7N3 995 aaPredicted RBP23.3■■□□□ 1.32
SMARCAD1-207ENST00000510105 PRDM2Q13029 1718 aa23.23■■□□□ 1.31
SMARCAD1-207ENST00000510105 CENPBP07199 599 aaPredicted RBP23.21■■□□□ 1.31
SMARCAD1-207ENST00000510105 ARHGAP35Q9NRY4 1499 aa23.19■■□□□ 1.3
SMARCAD1-207ENST00000510105 CUX2O14529 1486 aa23.16■■□□□ 1.3
SMARCAD1-207ENST00000510105 GTF3C3Q9Y5Q9 886 aa23.14■■□□□ 1.3
SMARCAD1-207ENST00000510105 CADPSQ9ULU8 1353 aa23.13■■□□□ 1.29
SMARCAD1-207ENST00000510105 IGF1RP08069 1367 aa23.12■■□□□ 1.29
SMARCAD1-207ENST00000510105 DHX57Q6P158 1386 aaKnown RBP23.12■■□□□ 1.29
SMARCAD1-207ENST00000510105 MIER1Q8N108 512 aa23.11■■□□□ 1.29
SMARCAD1-207ENST00000510105 RRBP1Q9P2E9 1410 aaKnown RBP23.1■■□□□ 1.29
SMARCAD1-207ENST00000510105 FGD5Q6ZNL6 1462 aa23.07■■□□□ 1.28
SMARCAD1-207ENST00000510105 YTHDC1Q96MU7 727 aaKnown RBP23.07■■□□□ 1.28
SMARCAD1-207ENST00000510105 CARMIL1Q5VZK9 1371 aa23.02■■□□□ 1.28
SMARCAD1-207ENST00000510105 CLSPNQ9HAW4 1339 aa23.01■■□□□ 1.27
SMARCAD1-207ENST00000510105 CCNB3Q8WWL7 1395 aa23.01■■□□□ 1.27
SMARCAD1-207ENST00000510105 CC2D2AQ9P2K1 1620 aa23.01■■□□□ 1.27
SMARCAD1-207ENST00000510105 PELP1Q8IZL8 1130 aaKnown RBP23■■□□□ 1.27
SMARCAD1-207ENST00000510105 ITGAEP38570 1179 aa22.98■■□□□ 1.27
SMARCAD1-207ENST00000510105 TIAM1Q13009 1591 aa22.93■■□□□ 1.26
SMARCAD1-207ENST00000510105 FANCD2Q9BXW9 1451 aa22.93■■□□□ 1.26
SMARCAD1-207ENST00000510105 RAD54L2Q9Y4B4 1467 aa22.87■■□□□ 1.25
SMARCAD1-207ENST00000510105 P3H3Q8IVL6 736 aa22.87■■□□□ 1.25
SMARCAD1-207ENST00000510105 MAP3K1Q13233 1512 aa22.85■■□□□ 1.25
SMARCAD1-207ENST00000510105 LRRC9Q6ZRR7 1453 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms