RNA–Protein interactions for RNA: ENST00000509443.1

NDUFS4-206, Transcript of NADH:ubiquinone oxidoreductase subunit S4, humanhuman

TSL 2

Gene NDUFS4, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4-206ENST00000509443 AEBP2Q6ZN18 517 aaPredicted RBP21.62■■□□□ 1.05
NDUFS4-206ENST00000509443 CHIC1Q5VXU3 224 aa20.42■□□□□ 0.86
NDUFS4-206ENST00000509443 SENP3Q9H4L4 574 aaPredicted RBP18.45■□□□□ 0.54
NDUFS4-206ENST00000509443 PHF23Q9BUL5 403 aaPredicted RBP18.17■□□□□ 0.5
NDUFS4-206ENST00000509443 POTEDQ86YR6 584 aa17.51■□□□□ 0.39
NDUFS4-206ENST00000509443 FOXD1Q16676 465 aa17.22■□□□□ 0.35
NDUFS4-206ENST00000509443 PLPPR3Q6T4P5 718 aa16.25■□□□□ 0.19
NDUFS4-206ENST00000509443 MSH5O43196 834 aa16.14■□□□□ 0.17
NDUFS4-206ENST00000509443 PIAS4Q8N2W9 510 aaPredicted RBP16.04■□□□□ 0.16
NDUFS4-206ENST00000509443 PPP6R1Q9UPN7 881 aa16■□□□□ 0.15
NDUFS4-206ENST00000509443 ADRA2BP18089 450 aa15.92■□□□□ 0.14
NDUFS4-206ENST00000509443 MAPK8IP2Q13387 824 aaPredicted RBP14.65□□□□□ -0.06
NDUFS4-206ENST00000509443 DMRT2Q9Y5R5 561 aa14.62□□□□□ -0.07
NDUFS4-206ENST00000509443 SCAF1Q9H7N4 1312 aaKnown RBP14.54□□□□□ -0.08
NDUFS4-206ENST00000509443 CACNB1Q02641 598 aaPredicted RBP14.26□□□□□ -0.13
NDUFS4-206ENST00000509443 PPP4R3CPQ6ZMV5 832 aa14.21□□□□□ -0.13
NDUFS4-206ENST00000509443 HOXD11P31277 338 aaPredicted RBP14.05□□□□□ -0.16
NDUFS4-206ENST00000509443 CNKSR2Q8WXI2 1034 aa13.98□□□□□ -0.17
NDUFS4-206ENST00000509443 DCAF8L1A6NGE4 600 aa13.96□□□□□ -0.17
NDUFS4-206ENST00000509443 RNF216Q9NWF9 866 aaPredicted RBP13.89□□□□□ -0.19
NDUFS4-206ENST00000509443 RNF39Q9H2S5 420 aa13.78□□□□□ -0.2
NDUFS4-206ENST00000509443 NCBP3Q53F19 620 aaKnown RBP13.61□□□□□ -0.23
NDUFS4-206ENST00000509443 DNAJC5BQ9UF47 199 aa13.6□□□□□ -0.23
NDUFS4-206ENST00000509443 C1QBPQ07021 282 aaKnown RBP13.56□□□□□ -0.24
NDUFS4-206ENST00000509443 POTEHQ6S545 545 aa13.48□□□□□ -0.25
NDUFS4-206ENST00000509443 NPM3O75607 178 aaKnown RBP13.46□□□□□ -0.25
NDUFS4-206ENST00000509443 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.32□□□□□ -0.28
NDUFS4-206ENST00000509443 KCNA4P22459 653 aa13.1□□□□□ -0.31
NDUFS4-206ENST00000509443 U3KPZ7 1027 aaPredicted RBP13.09□□□□□ -0.31
NDUFS4-206ENST00000509443 SPINK5Q9NQ38 1064 aaPredicted RBP12.92□□□□□ -0.34
NDUFS4-206ENST00000509443 SLC4A2P04920 1241 aa12.89□□□□□ -0.35
NDUFS4-206ENST00000509443 CAPN15O75808 1086 aa12.86□□□□□ -0.35
NDUFS4-206ENST00000509443 DSG3P32926 999 aa12.86□□□□□ -0.35
NDUFS4-206ENST00000509443 APLP2Q06481 763 aa12.67□□□□□ -0.38
NDUFS4-206ENST00000509443 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.64□□□□□ -0.39
NDUFS4-206ENST00000509443 HNRNPUL2Q1KMD3 747 aaKnown RBP12.64□□□□□ -0.39
NDUFS4-206ENST00000509443 ZNF219Q9P2Y4 722 aaPredicted RBP12.63□□□□□ -0.39
NDUFS4-206ENST00000509443 TRHP20396 242 aaPredicted RBP12.62□□□□□ -0.39
NDUFS4-206ENST00000509443 ABCB7O75027 752 aa12.57□□□□□ -0.4
NDUFS4-206ENST00000509443 SAMD1Q6SPF0 538 aaPredicted RBP12.57□□□□□ -0.4
NDUFS4-206ENST00000509443 MYCNP04198 464 aaPredicted RBP12.45□□□□□ -0.42
NDUFS4-206ENST00000509443 SLC4A1APQ9BWU0 796 aaKnown RBP12.31□□□□□ -0.44
NDUFS4-206ENST00000509443 POLA2Q14181 598 aa12.27□□□□□ -0.45
NDUFS4-206ENST00000509443 RBM42Q9BTD8 480 aaKnown RBP12.26□□□□□ -0.45
NDUFS4-206ENST00000509443 FOXD4L1Q9NU39 408 aa12.25□□□□□ -0.45
NDUFS4-206ENST00000509443 ATF5Q9Y2D1 282 aaPredicted RBP12.17□□□□□ -0.46
NDUFS4-206ENST00000509443 ZBTB22O15209 634 aa12.06□□□□□ -0.48
NDUFS4-206ENST00000509443 CHRDL2Q6WN34 429 aa12.04□□□□□ -0.48
NDUFS4-206ENST00000509443 ZBTB12Q9Y330 459 aaPredicted RBP12.04□□□□□ -0.48
NDUFS4-206ENST00000509443 SP7Q8TDD2 431 aaPredicted RBP12□□□□□ -0.49
NDUFS4-206ENST00000509443 AKT1S1Q96B36 256 aa11.95□□□□□ -0.5
NDUFS4-206ENST00000509443 OSCARQ8IYS5 282 aa11.92□□□□□ -0.5
NDUFS4-206ENST00000509443 ATXN8OSP0DMR3 200 aa11.89□□□□□ -0.51
NDUFS4-206ENST00000509443 REM2Q8IYK8 340 aaPredicted RBP11.84□□□□□ -0.51
NDUFS4-206ENST00000509443 PIP4P2Q8N4L2 257 aa11.74□□□□□ -0.53
NDUFS4-206ENST00000509443 PITPNM1O00562 1244 aa11.73□□□□□ -0.53
NDUFS4-206ENST00000509443 PLSCR2Q9NRY7 297 aa11.73□□□□□ -0.53
NDUFS4-206ENST00000509443 FBLN2P98095 1184 aa11.67□□□□□ -0.54
NDUFS4-206ENST00000509443 SPDYE2BA6NHP3 402 aa11.66□□□□□ -0.54
NDUFS4-206ENST00000509443 SPDYE6P0CI01 402 aa11.66□□□□□ -0.54
NDUFS4-206ENST00000509443 SPDYE2Q495Y8 402 aa11.66□□□□□ -0.54
NDUFS4-206ENST00000509443 FXR2P51116 673 aaKnown RBP eCLIP11.65□□□□□ -0.54
NDUFS4-206ENST00000509443 MKRN4PQ13434 485 aaPredicted RBP11.62□□□□□ -0.55
NDUFS4-206ENST00000509443 SSUH2Q9Y2M2 353 aa11.52□□□□□ -0.57
NDUFS4-206ENST00000509443 HAX1O00165 279 aa11.51□□□□□ -0.57
NDUFS4-206ENST00000509443 SPDYE1Q8NFV5 336 aaPredicted RBP11.47□□□□□ -0.57
NDUFS4-206ENST00000509443 ZNF692Q9BU19 519 aaPredicted RBP11.47□□□□□ -0.57
NDUFS4-206ENST00000509443 CLEC11AQ9Y240 323 aa11.42□□□□□ -0.58
NDUFS4-206ENST00000509443 PRKAR2AP13861 404 aaKnown RBP11.4□□□□□ -0.58
NDUFS4-206ENST00000509443 EVX2Q03828 476 aa11.39□□□□□ -0.59
NDUFS4-206ENST00000509443 CSRNP3Q8WYN3 585 aa11.38□□□□□ -0.59
NDUFS4-206ENST00000509443 PABPN1Q86U42 306 aaKnown RBP eCLIP11.31□□□□□ -0.6
NDUFS4-206ENST00000509443 C19orf67A6NJJ6 358 aa11.28□□□□□ -0.6
NDUFS4-206ENST00000509443 LHX8Q68G74 356 aa11.26□□□□□ -0.61
NDUFS4-206ENST00000509443 CHADLQ6NUI6 762 aa11.25□□□□□ -0.61
NDUFS4-206ENST00000509443 PRR29P0C7W0 189 aa11.22□□□□□ -0.61
NDUFS4-206ENST00000509443 EHMT2Q96KQ7 1210 aa11.13□□□□□ -0.63
NDUFS4-206ENST00000509443 GABBR2O75899 941 aa11.12□□□□□ -0.63
NDUFS4-206ENST00000509443 FARP1Q9Y4F1 1045 aaPredicted RBP11.07□□□□□ -0.64
NDUFS4-206ENST00000509443 CD44P16070 742 aaKnown RBP11.04□□□□□ -0.64
NDUFS4-206ENST00000509443 SPDYE4A6NLX3 237 aa10.97□□□□□ -0.65
NDUFS4-206ENST00000509443 STAG3Q9UJ98 1225 aa10.97□□□□□ -0.65
NDUFS4-206ENST00000509443 CREBZFQ9NS37 354 aa10.96□□□□□ -0.65
NDUFS4-206ENST00000509443 POTEIP0CG38 1075 aa10.91□□□□□ -0.66
NDUFS4-206ENST00000509443 CLCN6P51797 869 aa10.91□□□□□ -0.66
NDUFS4-206ENST00000509443 ZNF579Q8NAF0 562 aaKnown RBP10.89□□□□□ -0.67
NDUFS4-206ENST00000509443 ZRANB1Q9UGI0 708 aa10.85□□□□□ -0.67
NDUFS4-206ENST00000509443 MNX1P50219 401 aaPredicted RBP10.79□□□□□ -0.68
NDUFS4-206ENST00000509443 DCBLD2Q96PD2 775 aa10.77□□□□□ -0.69
NDUFS4-206ENST00000509443 GALR2O43603 387 aaPredicted RBP10.76□□□□□ -0.69
NDUFS4-206ENST00000509443 PROM2Q8N271 834 aa10.76□□□□□ -0.69
NDUFS4-206ENST00000509443 PAK3O75914 559 aaPredicted RBP10.73□□□□□ -0.69
NDUFS4-206ENST00000509443 NPM1P06748 294 aaKnown RBP eCLIP10.71□□□□□ -0.69
NDUFS4-206ENST00000509443 PHF12Q96QT6 1004 aa10.71□□□□□ -0.69
NDUFS4-206ENST00000509443 POTEMA6NI47 508 aa10.68□□□□□ -0.7
NDUFS4-206ENST00000509443 PCDH10Q9P2E7 1040 aa10.6□□□□□ -0.71
NDUFS4-206ENST00000509443 POTEGQ6S5H5 508 aa10.59□□□□□ -0.71
NDUFS4-206ENST00000509443 MS4A3Q96HJ5 214 aa10.57□□□□□ -0.72
NDUFS4-206ENST00000509443 PELP1Q8IZL8 1130 aaKnown RBP10.55□□□□□ -0.72
NDUFS4-206ENST00000509443 POTEB2H3BUK9 544 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms