RNA–Protein interactions for RNA: ENST00000504019.1

ABCA11P-202, Transcript of ATP binding cassette subfamily A member 11, pseudogene, humanhuman

BASIC

Gene ABCA11P, Length 2,110 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA11P-202ENST00000504019 AEBP2Q6ZN18 517 aaPredicted RBP21.29■■□□□ 1
ABCA11P-202ENST00000504019 CHIC1Q5VXU3 224 aa20.44■□□□□ 0.86
ABCA11P-202ENST00000504019 PHF23Q9BUL5 403 aaPredicted RBP18.01■□□□□ 0.47
ABCA11P-202ENST00000504019 SENP3Q9H4L4 574 aaPredicted RBP18■□□□□ 0.47
ABCA11P-202ENST00000504019 FOXD1Q16676 465 aa16.82■□□□□ 0.28
ABCA11P-202ENST00000504019 PLPPR3Q6T4P5 718 aa16.41■□□□□ 0.22
ABCA11P-202ENST00000504019 PPP6R1Q9UPN7 881 aa16■□□□□ 0.15
ABCA11P-202ENST00000504019 ADRA2BP18089 450 aa15.94■□□□□ 0.14
ABCA11P-202ENST00000504019 PIAS4Q8N2W9 510 aaPredicted RBP15.73■□□□□ 0.11
ABCA11P-202ENST00000504019 MSH5O43196 834 aa15.53■□□□□ 0.08
ABCA11P-202ENST00000504019 POTEDQ86YR6 584 aa14.75□□□□□ -0.05
ABCA11P-202ENST00000504019 MAPK8IP2Q13387 824 aaPredicted RBP14.57□□□□□ -0.08
ABCA11P-202ENST00000504019 PPP4R3CPQ6ZMV5 832 aa14.46□□□□□ -0.09
ABCA11P-202ENST00000504019 SCAF1Q9H7N4 1312 aaKnown RBP14.44□□□□□ -0.1
ABCA11P-202ENST00000504019 DMRT2Q9Y5R5 561 aa14.36□□□□□ -0.11
ABCA11P-202ENST00000504019 EHMT2Q96KQ7 1210 aa14.24□□□□□ -0.13
ABCA11P-202ENST00000504019 CNKSR2Q8WXI2 1034 aa14.09□□□□□ -0.15
ABCA11P-202ENST00000504019 HOXD11P31277 338 aaPredicted RBP13.94□□□□□ -0.18
ABCA11P-202ENST00000504019 KCNA4P22459 653 aa13.94□□□□□ -0.18
ABCA11P-202ENST00000504019 NCBP3Q53F19 620 aaKnown RBP13.92□□□□□ -0.18
ABCA11P-202ENST00000504019 RNF216Q9NWF9 866 aaPredicted RBP13.9□□□□□ -0.18
ABCA11P-202ENST00000504019 NPM3O75607 178 aaKnown RBP13.81□□□□□ -0.2
ABCA11P-202ENST00000504019 DCAF8L1A6NGE4 600 aa13.72□□□□□ -0.21
ABCA11P-202ENST00000504019 CSRNP3Q8WYN3 585 aa13.6□□□□□ -0.23
ABCA11P-202ENST00000504019 SLC4A1APQ9BWU0 796 aaKnown RBP13.42□□□□□ -0.26
ABCA11P-202ENST00000504019 DNAJC5BQ9UF47 199 aa13.42□□□□□ -0.26
ABCA11P-202ENST00000504019 RNF39Q9H2S5 420 aa13.34□□□□□ -0.27
ABCA11P-202ENST00000504019 SLC24A1O60721 1099 aa13.29□□□□□ -0.28
ABCA11P-202ENST00000504019 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.25□□□□□ -0.29
ABCA11P-202ENST00000504019 CACNB1Q02641 598 aaPredicted RBP13.17□□□□□ -0.3
ABCA11P-202ENST00000504019 NISCHQ9Y2I1 1504 aa13.16□□□□□ -0.3
ABCA11P-202ENST00000504019 SLC4A2P04920 1241 aa13.15□□□□□ -0.3
ABCA11P-202ENST00000504019 C1QBPQ07021 282 aaKnown RBP13.11□□□□□ -0.31
ABCA11P-202ENST00000504019 U3KPZ7 1027 aaPredicted RBP13.06□□□□□ -0.32
ABCA11P-202ENST00000504019 RTN4Q9NQC3 1192 aaKnown RBP12.94□□□□□ -0.34
ABCA11P-202ENST00000504019 ZBTB22O15209 634 aa12.86□□□□□ -0.35
ABCA11P-202ENST00000504019 AMER1Q5JTC6 1135 aaPredicted RBP12.86□□□□□ -0.35
ABCA11P-202ENST00000504019 SPINK5Q9NQ38 1064 aaPredicted RBP12.8□□□□□ -0.36
ABCA11P-202ENST00000504019 FOXD4L1Q9NU39 408 aa12.76□□□□□ -0.37
ABCA11P-202ENST00000504019 MYCNP04198 464 aaPredicted RBP12.71□□□□□ -0.37
ABCA11P-202ENST00000504019 CAPN15O75808 1086 aa12.7□□□□□ -0.38
ABCA11P-202ENST00000504019 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.67□□□□□ -0.38
ABCA11P-202ENST00000504019 HNRNPUL2Q1KMD3 747 aaKnown RBP12.67□□□□□ -0.38
ABCA11P-202ENST00000504019 SAMD1Q6SPF0 538 aaPredicted RBP12.64□□□□□ -0.39
ABCA11P-202ENST00000504019 MYT1Q01538 1121 aa12.64□□□□□ -0.39
ABCA11P-202ENST00000504019 DSG3P32926 999 aa12.6□□□□□ -0.39
ABCA11P-202ENST00000504019 TRHP20396 242 aaPredicted RBP12.58□□□□□ -0.4
ABCA11P-202ENST00000504019 APLP2Q06481 763 aa12.58□□□□□ -0.4
ABCA11P-202ENST00000504019 PELP1Q8IZL8 1130 aaKnown RBP12.58□□□□□ -0.4
ABCA11P-202ENST00000504019 ZNF219Q9P2Y4 722 aaPredicted RBP12.52□□□□□ -0.4
ABCA11P-202ENST00000504019 ATF5Q9Y2D1 282 aaPredicted RBP12.5□□□□□ -0.41
ABCA11P-202ENST00000504019 ABCB7O75027 752 aa12.47□□□□□ -0.41
ABCA11P-202ENST00000504019 TTBK1Q5TCY1 1321 aaPredicted RBP12.37□□□□□ -0.43
ABCA11P-202ENST00000504019 ATXN8OSP0DMR3 200 aa12.31□□□□□ -0.44
ABCA11P-202ENST00000504019 POLA2Q14181 598 aa12.31□□□□□ -0.44
ABCA11P-202ENST00000504019 FKBP8Q14318 412 aa12.22□□□□□ -0.45
ABCA11P-202ENST00000504019 ZBTB12Q9Y330 459 aaPredicted RBP12.01□□□□□ -0.49
ABCA11P-202ENST00000504019 MKRN4PQ13434 485 aaPredicted RBP11.93□□□□□ -0.5
ABCA11P-202ENST00000504019 OSCARQ8IYS5 282 aa11.93□□□□□ -0.5
ABCA11P-202ENST00000504019 RBM42Q9BTD8 480 aaKnown RBP11.92□□□□□ -0.5
ABCA11P-202ENST00000504019 FBLN2P98095 1184 aa11.86□□□□□ -0.51
ABCA11P-202ENST00000504019 CCDC180Q9P1Z9 1646 aa11.84□□□□□ -0.51
ABCA11P-202ENST00000504019 PRKCSHP14314 528 aaPredicted RBP11.84□□□□□ -0.51
ABCA11P-202ENST00000504019 PLCB2Q00722 1185 aa11.84□□□□□ -0.51
ABCA11P-202ENST00000504019 ERICH6Q7L0X2 663 aa11.83□□□□□ -0.52
ABCA11P-202ENST00000504019 AKT1S1Q96B36 256 aa11.75□□□□□ -0.53
ABCA11P-202ENST00000504019 DAXXQ9UER7 740 aaPredicted RBP11.73□□□□□ -0.53
ABCA11P-202ENST00000504019 SPDYE2BA6NHP3 402 aa11.71□□□□□ -0.54
ABCA11P-202ENST00000504019 SPDYE6P0CI01 402 aa11.71□□□□□ -0.54
ABCA11P-202ENST00000504019 SPDYE2Q495Y8 402 aa11.71□□□□□ -0.54
ABCA11P-202ENST00000504019 BCANQ96GW7 911 aa11.71□□□□□ -0.54
ABCA11P-202ENST00000504019 HAP1P54257 671 aaPredicted RBP11.7□□□□□ -0.54
ABCA11P-202ENST00000504019 REM2Q8IYK8 340 aaPredicted RBP11.68□□□□□ -0.54
ABCA11P-202ENST00000504019 TAOK2Q9UL54 1235 aa11.64□□□□□ -0.55
ABCA11P-202ENST00000504019 SSUH2Q9Y2M2 353 aa11.63□□□□□ -0.55
ABCA11P-202ENST00000504019 ZNF692Q9BU19 519 aaPredicted RBP11.62□□□□□ -0.55
ABCA11P-202ENST00000504019 CHRDL2Q6WN34 429 aa11.6□□□□□ -0.55
ABCA11P-202ENST00000504019 POTEHQ6S545 545 aa11.59□□□□□ -0.55
ABCA11P-202ENST00000504019 PITPNM1O00562 1244 aa11.56□□□□□ -0.56
ABCA11P-202ENST00000504019 VSIG10Q8N0Z9 540 aa11.5□□□□□ -0.57
ABCA11P-202ENST00000504019 PABPN1Q86U42 306 aaKnown RBP eCLIP11.48□□□□□ -0.57
ABCA11P-202ENST00000504019 DCAF8L2P0C7V8 631 aa11.48□□□□□ -0.57
ABCA11P-202ENST00000504019 TPRNQ4KMQ1 711 aa11.47□□□□□ -0.57
ABCA11P-202ENST00000504019 SPDYE4A6NLX3 237 aa11.45□□□□□ -0.58
ABCA11P-202ENST00000504019 FBXO3Q9UK99 471 aa11.45□□□□□ -0.58
ABCA11P-202ENST00000504019 PIP4P2Q8N4L2 257 aa11.42□□□□□ -0.58
ABCA11P-202ENST00000504019 SPDYE1Q8NFV5 336 aaPredicted RBP11.42□□□□□ -0.58
ABCA11P-202ENST00000504019 CLEC11AQ9Y240 323 aa11.41□□□□□ -0.58
ABCA11P-202ENST00000504019 FXR2P51116 673 aaKnown RBP eCLIP11.39□□□□□ -0.59
ABCA11P-202ENST00000504019 ABCC9O60706 1549 aa11.38□□□□□ -0.59
ABCA11P-202ENST00000504019 KDM2AQ9Y2K7 1162 aa11.32□□□□□ -0.6
ABCA11P-202ENST00000504019 VASPP50552 380 aaPredicted RBP11.3□□□□□ -0.6
ABCA11P-202ENST00000504019 PKD2Q13563 968 aa11.26□□□□□ -0.61
ABCA11P-202ENST00000504019 IFNLR1Q8IU57 520 aaPredicted RBP11.26□□□□□ -0.61
ABCA11P-202ENST00000504019 PROM2Q8N271 834 aa11.26□□□□□ -0.61
ABCA11P-202ENST00000504019 PRR29P0C7W0 189 aa11.25□□□□□ -0.61
ABCA11P-202ENST00000504019 PRKAR2AP13861 404 aaKnown RBP11.24□□□□□ -0.61
ABCA11P-202ENST00000504019 CHADLQ6NUI6 762 aa11.21□□□□□ -0.61
ABCA11P-202ENST00000504019 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.2□□□□□ -0.62
ABCA11P-202ENST00000504019 BBXQ8WY36 941 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms