RNA–Protein interactions for RNA: ENST00000503315.5

PTCD2-206, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 1,440 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-206ENST00000503315 AEBP2Q6ZN18 517 aaPredicted RBP21.88■■□□□ 1.09
PTCD2-206ENST00000503315 CHIC1Q5VXU3 224 aa20.68■□□□□ 0.9
PTCD2-206ENST00000503315 SENP3Q9H4L4 574 aaPredicted RBP18.87■□□□□ 0.61
PTCD2-206ENST00000503315 PHF23Q9BUL5 403 aaPredicted RBP18.5■□□□□ 0.55
PTCD2-206ENST00000503315 POTEDQ86YR6 584 aa17.89■□□□□ 0.46
PTCD2-206ENST00000503315 FOXD1Q16676 465 aa17.66■□□□□ 0.42
PTCD2-206ENST00000503315 PLPPR3Q6T4P5 718 aa17.4■□□□□ 0.38
PTCD2-206ENST00000503315 MSH5O43196 834 aa16.89■□□□□ 0.29
PTCD2-206ENST00000503315 NISCHQ9Y2I1 1504 aa16.88■□□□□ 0.29
PTCD2-206ENST00000503315 EHMT2Q96KQ7 1210 aa16.84■□□□□ 0.29
PTCD2-206ENST00000503315 KCNA4P22459 653 aa16.4■□□□□ 0.22
PTCD2-206ENST00000503315 PIAS4Q8N2W9 510 aaPredicted RBP16.34■□□□□ 0.21
PTCD2-206ENST00000503315 ADRA2BP18089 450 aa16.11■□□□□ 0.17
PTCD2-206ENST00000503315 CSRNP3Q8WYN3 585 aa15.98■□□□□ 0.15
PTCD2-206ENST00000503315 SLC4A1APQ9BWU0 796 aaKnown RBP15.93■□□□□ 0.14
PTCD2-206ENST00000503315 PPP6R1Q9UPN7 881 aa15.85■□□□□ 0.13
PTCD2-206ENST00000503315 SLC24A1O60721 1099 aa15.81■□□□□ 0.12
PTCD2-206ENST00000503315 NCBP3Q53F19 620 aaKnown RBP15.51■□□□□ 0.07
PTCD2-206ENST00000503315 PPP4R3CPQ6ZMV5 832 aa15.44■□□□□ 0.06
PTCD2-206ENST00000503315 AMER1Q5JTC6 1135 aaPredicted RBP15.36■□□□□ 0.05
PTCD2-206ENST00000503315 RTN4Q9NQC3 1192 aaKnown RBP15.25■□□□□ 0.03
PTCD2-206ENST00000503315 CCDC180Q9P1Z9 1646 aa15.14■□□□□ 0.01
PTCD2-206ENST00000503315 NPM3O75607 178 aaKnown RBP15.12■□□□□ 0.01
PTCD2-206ENST00000503315 CACNB1Q02641 598 aaPredicted RBP15.07■□□□□ 0
PTCD2-206ENST00000503315 ZBTB22O15209 634 aa15.04■□□□□ -0
PTCD2-206ENST00000503315 ABCC9O60706 1549 aa15.04■□□□□ -0
PTCD2-206ENST00000503315 FOXD4L1Q9NU39 408 aa14.83□□□□□ -0.04
PTCD2-206ENST00000503315 DMRT2Q9Y5R5 561 aa14.8□□□□□ -0.04
PTCD2-206ENST00000503315 CNKSR2Q8WXI2 1034 aa14.78□□□□□ -0.04
PTCD2-206ENST00000503315 MAPK8IP2Q13387 824 aaPredicted RBP14.75□□□□□ -0.05
PTCD2-206ENST00000503315 SCAF1Q9H7N4 1312 aaKnown RBP14.63□□□□□ -0.07
PTCD2-206ENST00000503315 FKBP8Q14318 412 aa14.48□□□□□ -0.09
PTCD2-206ENST00000503315 DNAJC5BQ9UF47 199 aa14.48□□□□□ -0.09
PTCD2-206ENST00000503315 DCAF8L1A6NGE4 600 aa14.36□□□□□ -0.11
PTCD2-206ENST00000503315 RB1CC1Q8TDY2 1594 aa14.36□□□□□ -0.11
PTCD2-206ENST00000503315 RNF39Q9H2S5 420 aa14.29□□□□□ -0.12
PTCD2-206ENST00000503315 NACADO15069 1562 aa14.28□□□□□ -0.12
PTCD2-206ENST00000503315 ATXN8OSP0DMR3 200 aa14.22□□□□□ -0.13
PTCD2-206ENST00000503315 DCAF8L2P0C7V8 631 aa14.21□□□□□ -0.13
PTCD2-206ENST00000503315 RNF216Q9NWF9 866 aaPredicted RBP14.17□□□□□ -0.14
PTCD2-206ENST00000503315 UNC13AQ9UPW8 1703 aa14.13□□□□□ -0.15
PTCD2-206ENST00000503315 MYO15BQ96JP2 1530 aa14.12□□□□□ -0.15
PTCD2-206ENST00000503315 C1QBPQ07021 282 aaKnown RBP14.07□□□□□ -0.16
PTCD2-206ENST00000503315 PLCB2Q00722 1185 aa14.05□□□□□ -0.16
PTCD2-206ENST00000503315 MYCNP04198 464 aaPredicted RBP14.04□□□□□ -0.16
PTCD2-206ENST00000503315 PABPN1Q86U42 306 aaKnown RBP eCLIP14.01□□□□□ -0.17
PTCD2-206ENST00000503315 BCANQ96GW7 911 aa13.99□□□□□ -0.17
PTCD2-206ENST00000503315 ZCCHC6Q5VYS8 1495 aaKnown RBP13.98□□□□□ -0.17
PTCD2-206ENST00000503315 BICRAQ9NZM4 1560 aa13.96□□□□□ -0.17
PTCD2-206ENST00000503315 DCAF1Q9Y4B6 1507 aa13.95□□□□□ -0.18
PTCD2-206ENST00000503315 SLC4A2P04920 1241 aa13.93□□□□□ -0.18
PTCD2-206ENST00000503315 HAP1P54257 671 aaPredicted RBP13.92□□□□□ -0.18
PTCD2-206ENST00000503315 HOXD11P31277 338 aaPredicted RBP13.91□□□□□ -0.18
PTCD2-206ENST00000503315 POTEHQ6S545 545 aa13.88□□□□□ -0.19
PTCD2-206ENST00000503315 PRKCSHP14314 528 aaPredicted RBP13.8□□□□□ -0.2
PTCD2-206ENST00000503315 TAOK2Q9UL54 1235 aa13.8□□□□□ -0.2
PTCD2-206ENST00000503315 SCRIBQ14160 1630 aa13.76□□□□□ -0.21
PTCD2-206ENST00000503315 SHROOM4Q9ULL8 1493 aa13.74□□□□□ -0.21
PTCD2-206ENST00000503315 FBXO3Q9UK99 471 aa13.73□□□□□ -0.21
PTCD2-206ENST00000503315 VSIG10Q8N0Z9 540 aa13.71□□□□□ -0.22
PTCD2-206ENST00000503315 CC2D2AQ9P2K1 1620 aa13.63□□□□□ -0.23
PTCD2-206ENST00000503315 EIF4G1Q04637 1599 aaKnown RBP13.6□□□□□ -0.23
PTCD2-206ENST00000503315 TPRNQ4KMQ1 711 aa13.58□□□□□ -0.24
PTCD2-206ENST00000503315 CECR2Q9BXF3 1484 aa13.53□□□□□ -0.24
PTCD2-206ENST00000503315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.45□□□□□ -0.26
PTCD2-206ENST00000503315 HNRNPUL2Q1KMD3 747 aaKnown RBP13.45□□□□□ -0.26
PTCD2-206ENST00000503315 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.45□□□□□ -0.26
PTCD2-206ENST00000503315 ATF5Q9Y2D1 282 aaPredicted RBP13.42□□□□□ -0.26
PTCD2-206ENST00000503315 VASPP50552 380 aaPredicted RBP13.41□□□□□ -0.26
PTCD2-206ENST00000503315 SAMD1Q6SPF0 538 aaPredicted RBP13.41□□□□□ -0.26
PTCD2-206ENST00000503315 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.36□□□□□ -0.27
PTCD2-206ENST00000503315 SPDYE4A6NLX3 237 aa13.33□□□□□ -0.28
PTCD2-206ENST00000503315 BBXQ8WY36 941 aaPredicted RBP13.3□□□□□ -0.28
PTCD2-206ENST00000503315 KDM2AQ9Y2K7 1162 aa13.29□□□□□ -0.28
PTCD2-206ENST00000503315 PKD2Q13563 968 aa13.25□□□□□ -0.29
PTCD2-206ENST00000503315 PAXIP1Q6ZW49 1069 aaPredicted RBP13.25□□□□□ -0.29
PTCD2-206ENST00000503315 IFNLR1Q8IU57 520 aaPredicted RBP13.25□□□□□ -0.29
PTCD2-206ENST00000503315 DAXXQ9UER7 740 aaPredicted RBP13.24□□□□□ -0.29
PTCD2-206ENST00000503315 ERICH6Q7L0X2 663 aa13.23□□□□□ -0.29
PTCD2-206ENST00000503315 CFAP44Q96MT7 982 aa13.23□□□□□ -0.29
PTCD2-206ENST00000503315 FBLN2P98095 1184 aa13.21□□□□□ -0.3
PTCD2-206ENST00000503315 ARXQ96QS3 562 aa13.21□□□□□ -0.3
PTCD2-206ENST00000503315 NCAPD3P42695 1498 aa13.19□□□□□ -0.3
PTCD2-206ENST00000503315 ZNF219Q9P2Y4 722 aaPredicted RBP13.17□□□□□ -0.3
PTCD2-206ENST00000503315 TIMELESSQ9UNS1 1208 aa13.17□□□□□ -0.3
PTCD2-206ENST00000503315 SMARCA4P51532 1647 aa13.16□□□□□ -0.3
PTCD2-206ENST00000503315 TULP1O00294 542 aaPredicted RBP13.15□□□□□ -0.3
PTCD2-206ENST00000503315 PROM2Q8N271 834 aa13.15□□□□□ -0.3
PTCD2-206ENST00000503315 ATAD2BQ9ULI0 1458 aa13.15□□□□□ -0.3
PTCD2-206ENST00000503315 NBR1Q14596 966 aa13.13□□□□□ -0.31
PTCD2-206ENST00000503315 DSG3P32926 999 aa13.12□□□□□ -0.31
PTCD2-206ENST00000503315 SMARCA2P51531 1590 aa13.11□□□□□ -0.31
PTCD2-206ENST00000503315 ECM2O94769 699 aaPredicted RBP13.09□□□□□ -0.31
PTCD2-206ENST00000503315 SPRYD3Q8NCJ5 442 aa13.09□□□□□ -0.31
PTCD2-206ENST00000503315 BAZ1AQ9NRL2 1556 aaPredicted RBP13.09□□□□□ -0.31
PTCD2-206ENST00000503315 HMGXB3Q12766 1538 aa13.08□□□□□ -0.31
PTCD2-206ENST00000503315 GTF3C3Q9Y5Q9 886 aa13.08□□□□□ -0.32
PTCD2-206ENST00000503315 APLP2Q06481 763 aa13.07□□□□□ -0.32
PTCD2-206ENST00000503315 CAPN15O75808 1086 aa13.06□□□□□ -0.32
PTCD2-206ENST00000503315 PEG3Q9GZU2 1588 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 711.1 ms