RNA–Protein interactions for RNA: ENST00000500197.6

LINC00461-201, long intergenic non-protein coding RNA 461, humanhuman

TSL 1 (best) BASIC

Gene LINC00461, Length 3,381 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-201ENST00000500197 NISCHQ9Y2I1 1504 aa21.82■■□□□ 1.08
LINC00461-201ENST00000500197 CCDC180Q9P1Z9 1646 aa19.09■□□□□ 0.65
LINC00461-201ENST00000500197 ZCCHC6Q5VYS8 1495 aaKnown RBP18.51■□□□□ 0.55
LINC00461-201ENST00000500197 DCAF1Q9Y4B6 1507 aa18.33■□□□□ 0.52
LINC00461-201ENST00000500197 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
LINC00461-201ENST00000500197 NACADO15069 1562 aa17.51■□□□□ 0.39
LINC00461-201ENST00000500197 SHROOM4Q9ULL8 1493 aa17.49■□□□□ 0.39
LINC00461-201ENST00000500197 ABCC9O60706 1549 aa17.45■□□□□ 0.38
LINC00461-201ENST00000500197 SCRIBQ14160 1630 aa17.19■□□□□ 0.34
LINC00461-201ENST00000500197 RB1CC1Q8TDY2 1594 aa17.17■□□□□ 0.34
LINC00461-201ENST00000500197 DCAF8L2P0C7V8 631 aa17.01■□□□□ 0.31
LINC00461-201ENST00000500197 RSF1Q96T23 1441 aaPredicted RBP17.01■□□□□ 0.31
LINC00461-201ENST00000500197 SUPT5HO00267 1087 aaKnown RBP17■□□□□ 0.31
LINC00461-201ENST00000500197 UNC13AQ9UPW8 1703 aa16.97■□□□□ 0.31
LINC00461-201ENST00000500197 BAZ1AQ9NRL2 1556 aaPredicted RBP16.84■□□□□ 0.29
LINC00461-201ENST00000500197 CHIC1Q5VXU3 224 aa16.83■□□□□ 0.29
LINC00461-201ENST00000500197 MROH2BQ7Z745 1585 aa16.78■□□□□ 0.28
LINC00461-201ENST00000500197 EIF4G1Q04637 1599 aaKnown RBP16.75■□□□□ 0.27
LINC00461-201ENST00000500197 CECR2Q9BXF3 1484 aa16.73■□□□□ 0.27
LINC00461-201ENST00000500197 SMARCA4P51532 1647 aa16.71■□□□□ 0.27
LINC00461-201ENST00000500197 BICRAQ9NZM4 1560 aa16.7■□□□□ 0.26
LINC00461-201ENST00000500197 PEG3Q9GZU2 1588 aa16.7■□□□□ 0.26
LINC00461-201ENST00000500197 WIZO95785 1651 aa16.68■□□□□ 0.26
LINC00461-201ENST00000500197 TOP2AP11388 1531 aaKnown RBP16.65■□□□□ 0.26
LINC00461-201ENST00000500197 SMARCA2P51531 1590 aa16.48■□□□□ 0.23
LINC00461-201ENST00000500197 CCDC88BA6NC98 1476 aa16.33■□□□□ 0.2
LINC00461-201ENST00000500197 ATAD2BQ9ULI0 1458 aa16.22■□□□□ 0.19
LINC00461-201ENST00000500197 HMGXB3Q12766 1538 aa16.22■□□□□ 0.19
LINC00461-201ENST00000500197 EEA1Q15075 1411 aa16.12■□□□□ 0.17
LINC00461-201ENST00000500197 TRIM41Q8WV44 630 aa16.12■□□□□ 0.17
LINC00461-201ENST00000500197 NCAPD3P42695 1498 aa16.09■□□□□ 0.17
LINC00461-201ENST00000500197 BAZ1BQ9UIG0 1483 aaKnown RBP16.08■□□□□ 0.16
LINC00461-201ENST00000500197 PRDM2Q13029 1718 aa16.08■□□□□ 0.16
LINC00461-201ENST00000500197 BIVM-ERCC5R4GMW8 1640 aa16.04■□□□□ 0.16
LINC00461-201ENST00000500197 ABCC8Q09428 1581 aa16.03■□□□□ 0.16
LINC00461-201ENST00000500197 KIF21BO75037 1637 aa15.97■□□□□ 0.15
LINC00461-201ENST00000500197 LOC105371045A0A1W2PR82 267 aa15.97■□□□□ 0.15
LINC00461-201ENST00000500197 TOP2BQ02880 1626 aa15.96■□□□□ 0.15
LINC00461-201ENST00000500197 SYNJ1O43426 1573 aa15.95■□□□□ 0.14
LINC00461-201ENST00000500197 WRNQ14191 1432 aaPredicted RBP eCLIP15.94■□□□□ 0.14
LINC00461-201ENST00000500197 PABPN1Q86U42 306 aaKnown RBP eCLIP15.93■□□□□ 0.14
LINC00461-201ENST00000500197 HRCP23327 699 aa15.87■□□□□ 0.13
LINC00461-201ENST00000500197 TNIKQ9UKE5 1360 aa15.84■□□□□ 0.13
LINC00461-201ENST00000500197 CFTRP13569 1480 aa15.84■□□□□ 0.13
LINC00461-201ENST00000500197 TRIM26Q12899 539 aaPredicted RBP15.83■□□□□ 0.12
LINC00461-201ENST00000500197 GOLGA3Q08378 1498 aa15.79■□□□□ 0.12
LINC00461-201ENST00000500197 SOGA1O94964 1423 aa15.79■□□□□ 0.12
LINC00461-201ENST00000500197 ERICH3Q5RHP9 1530 aa15.77■□□□□ 0.12
LINC00461-201ENST00000500197 CEP164Q9UPV0 1460 aa15.77■□□□□ 0.11
LINC00461-201ENST00000500197 RUSC2Q8N2Y8 1516 aa15.71■□□□□ 0.11
LINC00461-201ENST00000500197 CUX1P39880 1505 aa15.7■□□□□ 0.1
LINC00461-201ENST00000500197 CEP162Q5TB80 1403 aa15.69■□□□□ 0.1
LINC00461-201ENST00000500197 PCGF6Q9BYE7 350 aa15.68■□□□□ 0.1
LINC00461-201ENST00000500197 CC2D2AQ9P2K1 1620 aa15.67■□□□□ 0.1
LINC00461-201ENST00000500197 CSRNP3Q8WYN3 585 aa15.66■□□□□ 0.1
LINC00461-201ENST00000500197 PRXQ9BXM0 1461 aa15.65■□□□□ 0.1
LINC00461-201ENST00000500197 FAM9AQ8IZU1 332 aaPredicted RBP15.56■□□□□ 0.08
LINC00461-201ENST00000500197 CADPSQ9ULU8 1353 aa15.55■□□□□ 0.08
LINC00461-201ENST00000500197 ZEB1P37275 1124 aaPredicted RBP15.52■□□□□ 0.07
LINC00461-201ENST00000500197 LAMC3Q9Y6N6 1575 aa15.51■□□□□ 0.07
LINC00461-201ENST00000500197 RAPGEF2Q9Y4G8 1499 aa15.51■□□□□ 0.07
LINC00461-201ENST00000500197 WDR97A6NE52 1622 aa15.5■□□□□ 0.07
LINC00461-201ENST00000500197 DNMBPQ6XZF7 1577 aa15.49■□□□□ 0.07
LINC00461-201ENST00000500197 KIF27Q86VH2 1401 aa15.48■□□□□ 0.07
LINC00461-201ENST00000500197 VPS8Q8N3P4 1428 aa15.48■□□□□ 0.07
LINC00461-201ENST00000500197 CLIP1P30622 1438 aa15.43■□□□□ 0.06
LINC00461-201ENST00000500197 MAP3K1Q13233 1512 aa15.4■□□□□ 0.06
LINC00461-201ENST00000500197 ABCA10Q8WWZ4 1543 aa15.39■□□□□ 0.05
LINC00461-201ENST00000500197 CUL7Q14999 1698 aa15.39■□□□□ 0.05
LINC00461-201ENST00000500197 ARAP1Q96P48 1450 aa15.38■□□□□ 0.05
LINC00461-201ENST00000500197 FANCD2Q9BXW9 1451 aa15.38■□□□□ 0.05
LINC00461-201ENST00000500197 FGD5Q6ZNL6 1462 aa15.37■□□□□ 0.05
LINC00461-201ENST00000500197 TOPBP1Q92547 1522 aa15.33■□□□□ 0.04
LINC00461-201ENST00000500197 ABCA5Q8WWZ7 1642 aa15.32■□□□□ 0.04
LINC00461-201ENST00000500197 IGF1RP08069 1367 aa15.3■□□□□ 0.04
LINC00461-201ENST00000500197 CTTNBP2Q8WZ74 1663 aa15.29■□□□□ 0.04
LINC00461-201ENST00000500197 CUX2O14529 1486 aa15.26■□□□□ 0.03
LINC00461-201ENST00000500197 POLA1P09884 1462 aaPredicted RBP15.26■□□□□ 0.03
LINC00461-201ENST00000500197 ARHGAP35Q9NRY4 1499 aa15.26■□□□□ 0.03
LINC00461-201ENST00000500197 CFAP43Q8NDM7 1665 aa15.26■□□□□ 0.03
LINC00461-201ENST00000500197 EFCAB5A4FU69 1503 aa15.26■□□□□ 0.03
LINC00461-201ENST00000500197 UBTFP17480 764 aaKnown RBP15.25■□□□□ 0.03
LINC00461-201ENST00000500197 URB2Q14146 1524 aaKnown RBP15.22■□□□□ 0.03
LINC00461-201ENST00000500197 KIF21AQ7Z4S6 1674 aa15.22■□□□□ 0.03
LINC00461-201ENST00000500197 TARBP1Q13395 1621 aaKnown RBP15.21■□□□□ 0.03
LINC00461-201ENST00000500197 AQRO60306 1485 aaKnown RBP eCLIP15.2■□□□□ 0.02
LINC00461-201ENST00000500197 RRBP1Q9P2E9 1410 aaKnown RBP15.19■□□□□ 0.02
LINC00461-201ENST00000500197 SAMD9Q5K651 1589 aa15.17■□□□□ 0.02
LINC00461-201ENST00000500197 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
LINC00461-201ENST00000500197 TIAM1Q13009 1591 aa15.17■□□□□ 0.02
LINC00461-201ENST00000500197 CARMIL1Q5VZK9 1371 aa15.16■□□□□ 0.02
LINC00461-201ENST00000500197 NESP48681 1621 aa15.15■□□□□ 0.02
LINC00461-201ENST00000500197 PPARGC1BQ86YN6 1023 aaKnown RBP15.14■□□□□ 0.01
LINC00461-201ENST00000500197 THOC2Q8NI27 1593 aaKnown RBP15.13■□□□□ 0.01
LINC00461-201ENST00000500197 PBRM1Q86U86 1689 aa15.11■□□□□ 0.01
LINC00461-201ENST00000500197 EHMT2Q96KQ7 1210 aa15.09■□□□□ 0.01
LINC00461-201ENST00000500197 FYCO1Q9BQS8 1478 aa15.09■□□□□ 0.01
LINC00461-201ENST00000500197 FHAD1B1AJZ9 1412 aa15.09■□□□□ 0.01
LINC00461-201ENST00000500197 RAD54L2Q9Y4B4 1467 aa15.07■□□□□ 0
LINC00461-201ENST00000500197 WDR62O43379 1518 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms