RNA–Protein interactions for RNA: ENST00000498165.5

PPM1L-205, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1L, Length 10,934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1L-205ENST00000498165 DCAF8L2P0C7V8 631 aa13.14□□□□□ -0.31
PPM1L-205ENST00000498165 SUPT5HO00267 1087 aaKnown RBP12.65□□□□□ -0.38
PPM1L-205ENST00000498165 NISCHQ9Y2I1 1504 aa12.58□□□□□ -0.4
PPM1L-205ENST00000498165 PELP1Q8IZL8 1130 aaKnown RBP12.48□□□□□ -0.41
PPM1L-205ENST00000498165 SHROOM4Q9ULL8 1493 aa12.43□□□□□ -0.42
PPM1L-205ENST00000498165 EHMT2Q96KQ7 1210 aa12.31□□□□□ -0.44
PPM1L-205ENST00000498165 APLP2Q06481 763 aa12.14□□□□□ -0.47
PPM1L-205ENST00000498165 PCGF6Q9BYE7 350 aa12.07□□□□□ -0.48
PPM1L-205ENST00000498165 CENPBP07199 599 aaPredicted RBP11.98□□□□□ -0.49
PPM1L-205ENST00000498165 TTBK1Q5TCY1 1321 aaPredicted RBP11.96□□□□□ -0.49
PPM1L-205ENST00000498165 FAM9AQ8IZU1 332 aaPredicted RBP11.94□□□□□ -0.5
PPM1L-205ENST00000498165 ZEB1P37275 1124 aaPredicted RBP11.93□□□□□ -0.5
PPM1L-205ENST00000498165 ERICH6Q7L0X2 663 aa11.93□□□□□ -0.5
PPM1L-205ENST00000498165 CCER1Q8TC90 406 aaPredicted RBP11.88□□□□□ -0.51
PPM1L-205ENST00000498165 MYT1Q01538 1121 aa11.8□□□□□ -0.52
PPM1L-205ENST00000498165 NEFLP07196 543 aa11.73□□□□□ -0.53
PPM1L-205ENST00000498165 RANGAP1P46060 587 aaPredicted RBP11.73□□□□□ -0.53
PPM1L-205ENST00000498165 TRIM41Q8WV44 630 aa11.72□□□□□ -0.53
PPM1L-205ENST00000498165 YTHDC1Q96MU7 727 aaKnown RBP11.68□□□□□ -0.54
PPM1L-205ENST00000498165 UBTFP17480 764 aaKnown RBP11.63□□□□□ -0.55
PPM1L-205ENST00000498165 ATP1B4Q9UN42 357 aaPredicted RBP11.61□□□□□ -0.55
PPM1L-205ENST00000498165 TRIM26Q12899 539 aaPredicted RBP11.5□□□□□ -0.57
PPM1L-205ENST00000498165 PPARGC1BQ86YN6 1023 aaKnown RBP11.48□□□□□ -0.57
PPM1L-205ENST00000498165 HRCP23327 699 aa11.46□□□□□ -0.57
PPM1L-205ENST00000498165 DAXXQ9UER7 740 aaPredicted RBP11.41□□□□□ -0.58
PPM1L-205ENST00000498165 ITGAEP38570 1179 aa11.28□□□□□ -0.6
PPM1L-205ENST00000498165 POLR3GLQ9BT43 218 aa11.27□□□□□ -0.6
PPM1L-205ENST00000498165 LOC105371045A0A1W2PR82 267 aa11.25□□□□□ -0.61
PPM1L-205ENST00000498165 HNRNPUL2Q1KMD3 747 aaKnown RBP11.23□□□□□ -0.61
PPM1L-205ENST00000498165 CHIC1Q5VXU3 224 aa11.19□□□□□ -0.62
PPM1L-205ENST00000498165 DIEXFQ68CQ4 756 aaKnown RBP11.19□□□□□ -0.62
PPM1L-205ENST00000498165 RTL5Q5HYW3 569 aaPredicted RBP11.18□□□□□ -0.62
PPM1L-205ENST00000498165 ZNF316A6NFI3 1004 aaPredicted RBP11.15□□□□□ -0.62
PPM1L-205ENST00000498165 CNGB1Q14028 1251 aaPredicted RBP11.15□□□□□ -0.62
PPM1L-205ENST00000498165 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.14□□□□□ -0.63
PPM1L-205ENST00000498165 MYT1LQ9UL68 1186 aa11.11□□□□□ -0.63
PPM1L-205ENST00000498165 CLSPNQ9HAW4 1339 aa11.08□□□□□ -0.64
PPM1L-205ENST00000498165 SLC4A1APQ9BWU0 796 aaKnown RBP11.03□□□□□ -0.64
PPM1L-205ENST00000498165 GTF3C3Q9Y5Q9 886 aa11.01□□□□□ -0.65
PPM1L-205ENST00000498165 FAM50AQ14320 339 aaKnown RBP10.99□□□□□ -0.65
PPM1L-205ENST00000498165 BCANQ96GW7 911 aa10.99□□□□□ -0.65
PPM1L-205ENST00000498165 CDK11AQ9UQ88 783 aaPredicted RBP10.94□□□□□ -0.66
PPM1L-205ENST00000498165 NEUROD1Q13562 356 aa10.94□□□□□ -0.66
PPM1L-205ENST00000498165 ANP32CO43423 234 aa10.93□□□□□ -0.66
PPM1L-205ENST00000498165 TRIM52Q96A61 297 aa10.9□□□□□ -0.66
PPM1L-205ENST00000498165 ACIN1Q9UKV3 1341 aaKnown RBP10.84□□□□□ -0.67
PPM1L-205ENST00000498165 ZNF326Q5BKZ1 582 aaKnown RBP10.83□□□□□ -0.68
PPM1L-205ENST00000498165 ZBTB47Q9UFB7 747 aaPredicted RBP10.82□□□□□ -0.68
PPM1L-205ENST00000498165 ANP32AP39687 249 aaKnown RBP10.8□□□□□ -0.68
PPM1L-205ENST00000498165 CANXP27824 592 aaKnown RBP10.8□□□□□ -0.68
PPM1L-205ENST00000498165 BCL11AQ9H165 835 aa10.71□□□□□ -0.69
PPM1L-205ENST00000498165 NPM2Q86SE8 214 aaKnown RBP10.7□□□□□ -0.7
PPM1L-205ENST00000498165 ABCC9O60706 1549 aa10.69□□□□□ -0.7
PPM1L-205ENST00000498165 DCAF1Q9Y4B6 1507 aa10.69□□□□□ -0.7
PPM1L-205ENST00000498165 PABPN1Q86U42 306 aaKnown RBP eCLIP10.66□□□□□ -0.7
PPM1L-205ENST00000498165 NEFMP07197 916 aa10.65□□□□□ -0.7
PPM1L-205ENST00000498165 FKBP8Q14318 412 aa10.64□□□□□ -0.71
PPM1L-205ENST00000498165 SLC24A1O60721 1099 aa10.64□□□□□ -0.71
PPM1L-205ENST00000498165 EIF5BO60841 1220 aaKnown RBP10.63□□□□□ -0.71
PPM1L-205ENST00000498165 ANP32BQ92688 251 aaKnown RBP10.63□□□□□ -0.71
PPM1L-205ENST00000498165 SCRIBQ14160 1630 aa10.62□□□□□ -0.71
PPM1L-205ENST00000498165 TONSLQ96HA7 1378 aa10.6□□□□□ -0.71
PPM1L-205ENST00000498165 HSP90AA1P07900 732 aaKnown RBP10.6□□□□□ -0.71
PPM1L-205ENST00000498165 P3H3Q8IVL6 736 aa10.58□□□□□ -0.72
PPM1L-205ENST00000498165 CSRNP3Q8WYN3 585 aa10.58□□□□□ -0.72
PPM1L-205ENST00000498165 HNRNPUQ00839 825 aaKnown RBP eCLIP10.57□□□□□ -0.725e-6■■■□□ 19
PPM1L-205ENST00000498165 UPF2Q9HAU5 1272 aaKnown RBP10.57□□□□□ -0.72
PPM1L-205ENST00000498165 FBLN2P98095 1184 aa10.57□□□□□ -0.72
PPM1L-205ENST00000498165 ARID3CA6NKF2 412 aa10.56□□□□□ -0.72
PPM1L-205ENST00000498165 NBR1Q14596 966 aa10.54□□□□□ -0.72
PPM1L-205ENST00000498165 GLIPR1L2Q4G1C9 344 aa10.54□□□□□ -0.72
PPM1L-205ENST00000498165 DDX10Q13206 875 aaKnown RBP10.53□□□□□ -0.72
PPM1L-205ENST00000498165 CCDC180Q9P1Z9 1646 aa10.52□□□□□ -0.72
PPM1L-205ENST00000498165 FAM9BQ8IZU0 186 aa10.52□□□□□ -0.73
PPM1L-205ENST00000498165 CCDC136Q96JN2 1154 aa10.52□□□□□ -0.73
PPM1L-205ENST00000498165 ZNF777Q9ULD5 760 aaPredicted RBP10.51□□□□□ -0.73
PPM1L-205ENST00000498165 SCAF1Q9H7N4 1312 aaKnown RBP10.5□□□□□ -0.73
PPM1L-205ENST00000498165 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.46□□□□□ -0.73
PPM1L-205ENST00000498165 TMC1Q8TDI8 760 aa10.45□□□□□ -0.74
PPM1L-205ENST00000498165 ARXQ96QS3 562 aa10.44□□□□□ -0.74
PPM1L-205ENST00000498165 SALL2Q9Y467 1007 aaPredicted RBP10.44□□□□□ -0.74
PPM1L-205ENST00000498165 MIER1Q8N108 512 aa10.42□□□□□ -0.74
PPM1L-205ENST00000498165 MRS2Q9HD23 443 aa10.42□□□□□ -0.74
PPM1L-205ENST00000498165 IRX6P78412 446 aaPredicted RBP10.4□□□□□ -0.74
PPM1L-205ENST00000498165 ZCCHC6Q5VYS8 1495 aaKnown RBP10.4□□□□□ -0.74
PPM1L-205ENST00000498165 WDR43Q15061 677 aaKnown RBP eCLIP10.39□□□□□ -0.75
PPM1L-205ENST00000498165 CHGAP10645 457 aaKnown RBP10.37□□□□□ -0.75
PPM1L-205ENST00000498165 STAG3Q9UJ98 1225 aa10.36□□□□□ -0.75
PPM1L-205ENST00000498165 CLIP1P30622 1438 aa10.36□□□□□ -0.75
PPM1L-205ENST00000498165 ESF1Q9H501 851 aaKnown RBP10.36□□□□□ -0.75
PPM1L-205ENST00000498165 DDRGK1Q96HY6 314 aa10.35□□□□□ -0.75
PPM1L-205ENST00000498165 CHIC2Q9UKJ5 165 aa10.35□□□□□ -0.75
PPM1L-205ENST00000498165 MYO15BQ96JP2 1530 aa10.35□□□□□ -0.75
PPM1L-205ENST00000498165 MYH16Q9H6N6 1097 aa10.34□□□□□ -0.75
PPM1L-205ENST00000498165 BECN1Q14457 450 aa10.34□□□□□ -0.75
PPM1L-205ENST00000498165 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.33□□□□□ -0.76
PPM1L-205ENST00000498165 MTUS2Q5JR59 1369 aa10.32□□□□□ -0.76
PPM1L-205ENST00000498165 KDM2AQ9Y2K7 1162 aa10.32□□□□□ -0.76
PPM1L-205ENST00000498165 HIRIP3Q9BW71 556 aaPredicted RBP10.31□□□□□ -0.76
PPM1L-205ENST00000498165 EIF4G2P78344 907 aaKnown RBP eCLIP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms