RNA–Protein interactions for RNA: ENST00000489896.1

ATL2-216, Transcript of atlastin GTPase 2, humanhuman

TSL 2

Gene ATL2, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL2-216ENST00000489896 CHIC1Q5VXU3 224 aa22.86■■□□□ 1.25
ATL2-216ENST00000489896 AEBP2Q6ZN18 517 aaPredicted RBP22.8■■□□□ 1.24
ATL2-216ENST00000489896 PHF23Q9BUL5 403 aaPredicted RBP20.17■□□□□ 0.82
ATL2-216ENST00000489896 SENP3Q9H4L4 574 aaPredicted RBP19.57■□□□□ 0.72
ATL2-216ENST00000489896 PLPPR3Q6T4P5 718 aa18.8■□□□□ 0.6
ATL2-216ENST00000489896 FOXD1Q16676 465 aa18.08■□□□□ 0.48
ATL2-216ENST00000489896 ADRA2BP18089 450 aa17.61■□□□□ 0.41
ATL2-216ENST00000489896 PPP6R1Q9UPN7 881 aa17.58■□□□□ 0.4
ATL2-216ENST00000489896 PIAS4Q8N2W9 510 aaPredicted RBP17.04■□□□□ 0.32
ATL2-216ENST00000489896 KCNA4P22459 653 aa16.97■□□□□ 0.31
ATL2-216ENST00000489896 MSH5O43196 834 aa16.94■□□□□ 0.3
ATL2-216ENST00000489896 PPP4R3CPQ6ZMV5 832 aa16.65■□□□□ 0.26
ATL2-216ENST00000489896 EHMT2Q96KQ7 1210 aa16.49■□□□□ 0.23
ATL2-216ENST00000489896 NCBP3Q53F19 620 aaKnown RBP16.37■□□□□ 0.21
ATL2-216ENST00000489896 SLC4A1APQ9BWU0 796 aaKnown RBP16.26■□□□□ 0.19
ATL2-216ENST00000489896 NPM3O75607 178 aaKnown RBP16.16■□□□□ 0.18
ATL2-216ENST00000489896 SCAF1Q9H7N4 1312 aaKnown RBP16.05■□□□□ 0.16
ATL2-216ENST00000489896 CNKSR2Q8WXI2 1034 aa16.05■□□□□ 0.16
ATL2-216ENST00000489896 CSRNP3Q8WYN3 585 aa16.05■□□□□ 0.16
ATL2-216ENST00000489896 POTEDQ86YR6 584 aa15.8■□□□□ 0.12
ATL2-216ENST00000489896 MAPK8IP2Q13387 824 aaPredicted RBP15.77■□□□□ 0.12
ATL2-216ENST00000489896 DNAJC5BQ9UF47 199 aa15.68■□□□□ 0.1
ATL2-216ENST00000489896 ZBTB22O15209 634 aa15.67■□□□□ 0.1
ATL2-216ENST00000489896 RNF216Q9NWF9 866 aaPredicted RBP15.6■□□□□ 0.09
ATL2-216ENST00000489896 DMRT2Q9Y5R5 561 aa15.52■□□□□ 0.08
ATL2-216ENST00000489896 FOXD4L1Q9NU39 408 aa15.44■□□□□ 0.06
ATL2-216ENST00000489896 HOXD11P31277 338 aaPredicted RBP15.39■□□□□ 0.05
ATL2-216ENST00000489896 SLC4A2P04920 1241 aa15.13■□□□□ 0.01
ATL2-216ENST00000489896 DCAF8L1A6NGE4 600 aa14.93□□□□□ -0.02
ATL2-216ENST00000489896 MYCNP04198 464 aaPredicted RBP14.92□□□□□ -0.02
ATL2-216ENST00000489896 ATXN8OSP0DMR3 200 aa14.86□□□□□ -0.03
ATL2-216ENST00000489896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.6□□□□□ -0.07
ATL2-216ENST00000489896 ATF5Q9Y2D1 282 aaPredicted RBP14.49□□□□□ -0.09
ATL2-216ENST00000489896 U3KPZ7 1027 aaPredicted RBP14.49□□□□□ -0.09
ATL2-216ENST00000489896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.47□□□□□ -0.09
ATL2-216ENST00000489896 HNRNPUL2Q1KMD3 747 aaKnown RBP14.47□□□□□ -0.09
ATL2-216ENST00000489896 SAMD1Q6SPF0 538 aaPredicted RBP14.46□□□□□ -0.09
ATL2-216ENST00000489896 FKBP8Q14318 412 aa14.44□□□□□ -0.1
ATL2-216ENST00000489896 RNF39Q9H2S5 420 aa14.39□□□□□ -0.11
ATL2-216ENST00000489896 CACNB1Q02641 598 aaPredicted RBP14.3□□□□□ -0.12
ATL2-216ENST00000489896 C1QBPQ07021 282 aaKnown RBP14.29□□□□□ -0.12
ATL2-216ENST00000489896 AMER1Q5JTC6 1135 aaPredicted RBP14.25□□□□□ -0.13
ATL2-216ENST00000489896 RTN4Q9NQC3 1192 aaKnown RBP14.25□□□□□ -0.13
ATL2-216ENST00000489896 APLP2Q06481 763 aa14.17□□□□□ -0.14
ATL2-216ENST00000489896 ZNF219Q9P2Y4 722 aaPredicted RBP14.16□□□□□ -0.14
ATL2-216ENST00000489896 MKRN4PQ13434 485 aaPredicted RBP13.91□□□□□ -0.18
ATL2-216ENST00000489896 SPINK5Q9NQ38 1064 aaPredicted RBP13.88□□□□□ -0.19
ATL2-216ENST00000489896 SLC24A1O60721 1099 aa13.87□□□□□ -0.19
ATL2-216ENST00000489896 SPDYE4A6NLX3 237 aa13.84□□□□□ -0.19
ATL2-216ENST00000489896 TRHP20396 242 aaPredicted RBP13.84□□□□□ -0.19
ATL2-216ENST00000489896 CAPN15O75808 1086 aa13.82□□□□□ -0.2
ATL2-216ENST00000489896 FBLN2P98095 1184 aa13.79□□□□□ -0.2
ATL2-216ENST00000489896 PROM2Q8N271 834 aa13.79□□□□□ -0.2
ATL2-216ENST00000489896 POLA2Q14181 598 aa13.77□□□□□ -0.21
ATL2-216ENST00000489896 FBXO3Q9UK99 471 aa13.75□□□□□ -0.21
ATL2-216ENST00000489896 ZBTB12Q9Y330 459 aaPredicted RBP13.61□□□□□ -0.23
ATL2-216ENST00000489896 DSG3P32926 999 aa13.58□□□□□ -0.24
ATL2-216ENST00000489896 VASPP50552 380 aaPredicted RBP13.58□□□□□ -0.24
ATL2-216ENST00000489896 ABCB7O75027 752 aa13.57□□□□□ -0.24
ATL2-216ENST00000489896 IFNLR1Q8IU57 520 aaPredicted RBP13.44□□□□□ -0.26
ATL2-216ENST00000489896 OSCARQ8IYS5 282 aa13.31□□□□□ -0.28
ATL2-216ENST00000489896 SPDYE2BA6NHP3 402 aa13.3□□□□□ -0.28
ATL2-216ENST00000489896 SPDYE6P0CI01 402 aa13.3□□□□□ -0.28
ATL2-216ENST00000489896 SPDYE2Q495Y8 402 aa13.3□□□□□ -0.28
ATL2-216ENST00000489896 ZNF692Q9BU19 519 aaPredicted RBP13.3□□□□□ -0.28
ATL2-216ENST00000489896 SSUH2Q9Y2M2 353 aa13.3□□□□□ -0.28
ATL2-216ENST00000489896 PKD2Q13563 968 aa13.24□□□□□ -0.29
ATL2-216ENST00000489896 STAG3Q9UJ98 1225 aa13.22□□□□□ -0.29
ATL2-216ENST00000489896 PABPN1Q86U42 306 aaKnown RBP eCLIP13.17□□□□□ -0.3
ATL2-216ENST00000489896 PLCB2Q00722 1185 aa13.16□□□□□ -0.3
ATL2-216ENST00000489896 SPOCK2Q92563 424 aa13.16□□□□□ -0.3
ATL2-216ENST00000489896 KLHL34Q8N239 644 aa13.13□□□□□ -0.31
ATL2-216ENST00000489896 DCAF8L2P0C7V8 631 aa13.1□□□□□ -0.31
ATL2-216ENST00000489896 RBM42Q9BTD8 480 aaKnown RBP13.1□□□□□ -0.31
ATL2-216ENST00000489896 PLCD3Q8N3E9 789 aa13.08□□□□□ -0.32
ATL2-216ENST00000489896 MIER1Q8N108 512 aa13.02□□□□□ -0.33
ATL2-216ENST00000489896 ECM2O94769 699 aaPredicted RBP13.01□□□□□ -0.33
ATL2-216ENST00000489896 HAP1P54257 671 aaPredicted RBP12.92□□□□□ -0.34
ATL2-216ENST00000489896 ZBTB47Q9UFB7 747 aaPredicted RBP12.91□□□□□ -0.34
ATL2-216ENST00000489896 PLEKHG5O94827 1062 aa12.89□□□□□ -0.35
ATL2-216ENST00000489896 RGL2O15211 777 aa12.88□□□□□ -0.35
ATL2-216ENST00000489896 BBXQ8WY36 941 aaPredicted RBP12.88□□□□□ -0.35
ATL2-216ENST00000489896 NPM1P06748 294 aaKnown RBP eCLIP12.87□□□□□ -0.35
ATL2-216ENST00000489896 AKT1S1Q96B36 256 aa12.82□□□□□ -0.36
ATL2-216ENST00000489896 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.82□□□□□ -0.36
ATL2-216ENST00000489896 CIZ1Q9ULV3 898 aaPredicted RBP12.81□□□□□ -0.36
ATL2-216ENST00000489896 VSIG10Q8N0Z9 540 aa12.78□□□□□ -0.36
ATL2-216ENST00000489896 TRIM41Q8WV44 630 aa12.77□□□□□ -0.37
ATL2-216ENST00000489896 SPDYE1Q8NFV5 336 aaPredicted RBP12.74□□□□□ -0.37
ATL2-216ENST00000489896 PAXIP1Q6ZW49 1069 aaPredicted RBP12.73□□□□□ -0.37
ATL2-216ENST00000489896 NUBP1P53384 320 aa12.69□□□□□ -0.38
ATL2-216ENST00000489896 GSE1Q14687 1217 aa12.68□□□□□ -0.38
ATL2-216ENST00000489896 CFAP44Q96MT7 982 aa12.68□□□□□ -0.38
ATL2-216ENST00000489896 CHGAP10645 457 aaKnown RBP12.67□□□□□ -0.38
ATL2-216ENST00000489896 REM2Q8IYK8 340 aaPredicted RBP12.64□□□□□ -0.39
ATL2-216ENST00000489896 SPRYD3Q8NCJ5 442 aa12.64□□□□□ -0.39
ATL2-216ENST00000489896 RNF25Q96BH1 459 aaPredicted RBP12.64□□□□□ -0.39
ATL2-216ENST00000489896 CREBZFQ9NS37 354 aa12.64□□□□□ -0.39
ATL2-216ENST00000489896 KDM2AQ9Y2K7 1162 aa12.64□□□□□ -0.39
ATL2-216ENST00000489896 HS6ST3Q8IZP7 471 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms