RNA–Protein interactions for RNA: ENST00000481570.5

COL1A2-208, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 5,993 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-208ENST00000481570 DCAF8L2P0C7V8 631 aa20.19■□□□□ 0.82
COL1A2-208ENST00000481570 SUPT5HO00267 1087 aaKnown RBP19.03■□□□□ 0.64
COL1A2-208ENST00000481570 NISCHQ9Y2I1 1504 aa18.78■□□□□ 0.6
COL1A2-208ENST00000481570 SHROOM4Q9ULL8 1493 aa18.76■□□□□ 0.59
COL1A2-208ENST00000481570 EHMT2Q96KQ7 1210 aa18.67■□□□□ 0.58
COL1A2-208ENST00000481570 FAM9AQ8IZU1 332 aaPredicted RBP18.03■□□□□ 0.48
COL1A2-208ENST00000481570 APLP2Q06481 763 aa18.02■□□□□ 0.48
COL1A2-208ENST00000481570 TTBK1Q5TCY1 1321 aaPredicted RBP17.99■□□□□ 0.47
COL1A2-208ENST00000481570 RANGAP1P46060 587 aaPredicted RBP17.83■□□□□ 0.44
COL1A2-208ENST00000481570 PELP1Q8IZL8 1130 aaKnown RBP17.73■□□□□ 0.43
COL1A2-208ENST00000481570 PCGF6Q9BYE7 350 aa17.65■□□□□ 0.42
COL1A2-208ENST00000481570 ATP1B4Q9UN42 357 aaPredicted RBP17.62■□□□□ 0.41
COL1A2-208ENST00000481570 TRIM41Q8WV44 630 aa17.53■□□□□ 0.4
COL1A2-208ENST00000481570 UBTFP17480 764 aaKnown RBP17.4■□□□□ 0.38
COL1A2-208ENST00000481570 CCER1Q8TC90 406 aaPredicted RBP17.38■□□□□ 0.37
COL1A2-208ENST00000481570 PPARGC1BQ86YN6 1023 aaKnown RBP17.24■□□□□ 0.35
COL1A2-208ENST00000481570 CENPBP07199 599 aaPredicted RBP17.17■□□□□ 0.34
COL1A2-208ENST00000481570 ZEB1P37275 1124 aaPredicted RBP17.16■□□□□ 0.34
COL1A2-208ENST00000481570 ERICH6Q7L0X2 663 aa17.15■□□□□ 0.34
COL1A2-208ENST00000481570 YTHDC1Q96MU7 727 aaKnown RBP17.1■□□□□ 0.33
COL1A2-208ENST00000481570 ITGAEP38570 1179 aa16.96■□□□□ 0.31
COL1A2-208ENST00000481570 MYT1LQ9UL68 1186 aa16.96■□□□□ 0.31
COL1A2-208ENST00000481570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.96■□□□□ 0.31
COL1A2-208ENST00000481570 HNRNPUL2Q1KMD3 747 aaKnown RBP16.96■□□□□ 0.31
COL1A2-208ENST00000481570 NEFLP07196 543 aa16.92■□□□□ 0.3
COL1A2-208ENST00000481570 POLR3GLQ9BT43 218 aa16.86■□□□□ 0.29
COL1A2-208ENST00000481570 LOC105371045A0A1W2PR82 267 aa16.81■□□□□ 0.28
COL1A2-208ENST00000481570 TRIM26Q12899 539 aaPredicted RBP16.78■□□□□ 0.28
COL1A2-208ENST00000481570 CHIC1Q5VXU3 224 aa16.77■□□□□ 0.28
COL1A2-208ENST00000481570 CNGB1Q14028 1251 aaPredicted RBP16.76■□□□□ 0.27
COL1A2-208ENST00000481570 PABPN1Q86U42 306 aaKnown RBP eCLIP16.6■□□□□ 0.25
COL1A2-208ENST00000481570 HRCP23327 699 aa16.57■□□□□ 0.24
COL1A2-208ENST00000481570 SLC4A1APQ9BWU0 796 aaKnown RBP16.57■□□□□ 0.24
COL1A2-208ENST00000481570 ABCC9O60706 1549 aa16.52■□□□□ 0.23
COL1A2-208ENST00000481570 FAM50AQ14320 339 aaKnown RBP16.47■□□□□ 0.23
COL1A2-208ENST00000481570 DAXXQ9UER7 740 aaPredicted RBP16.47■□□□□ 0.23
COL1A2-208ENST00000481570 TRIM52Q96A61 297 aa16.39■□□□□ 0.21
COL1A2-208ENST00000481570 NEUROD1Q13562 356 aa16.33■□□□□ 0.2
COL1A2-208ENST00000481570 FBLN2P98095 1184 aa16.32■□□□□ 0.2
COL1A2-208ENST00000481570 MYT1Q01538 1121 aa16.29■□□□□ 0.2
COL1A2-208ENST00000481570 ZNF326Q5BKZ1 582 aaKnown RBP16.25■□□□□ 0.19
COL1A2-208ENST00000481570 DIEXFQ68CQ4 756 aaKnown RBP16.24■□□□□ 0.19
COL1A2-208ENST00000481570 CLSPNQ9HAW4 1339 aa16.21■□□□□ 0.19
COL1A2-208ENST00000481570 ARID3CA6NKF2 412 aa16.2■□□□□ 0.18
COL1A2-208ENST00000481570 P3H3Q8IVL6 736 aa16.16■□□□□ 0.18
COL1A2-208ENST00000481570 ZNF316A6NFI3 1004 aaPredicted RBP16.11■□□□□ 0.17
COL1A2-208ENST00000481570 BCANQ96GW7 911 aa16.09■□□□□ 0.17
COL1A2-208ENST00000481570 SLC24A1O60721 1099 aa16.02■□□□□ 0.16
COL1A2-208ENST00000481570 BCL11AQ9H165 835 aa16.01■□□□□ 0.15
COL1A2-208ENST00000481570 ZNF777Q9ULD5 760 aaPredicted RBP16.01■□□□□ 0.15
COL1A2-208ENST00000481570 ANP32CO43423 234 aa16■□□□□ 0.15
COL1A2-208ENST00000481570 RTL5Q5HYW3 569 aaPredicted RBP15.98■□□□□ 0.15
COL1A2-208ENST00000481570 CSRNP3Q8WYN3 585 aa15.9■□□□□ 0.14
COL1A2-208ENST00000481570 ZBTB47Q9UFB7 747 aaPredicted RBP15.89■□□□□ 0.13
COL1A2-208ENST00000481570 CANXP27824 592 aaKnown RBP15.88■□□□□ 0.13
COL1A2-208ENST00000481570 PLPPR3Q6T4P5 718 aa15.87■□□□□ 0.13
COL1A2-208ENST00000481570 GTF3C3Q9Y5Q9 886 aa15.87■□□□□ 0.13
COL1A2-208ENST00000481570 SCRIBQ14160 1630 aa15.82■□□□□ 0.12
COL1A2-208ENST00000481570 NEFMP07197 916 aa15.79■□□□□ 0.12
COL1A2-208ENST00000481570 CDK11AQ9UQ88 783 aaPredicted RBP15.79■□□□□ 0.12
COL1A2-208ENST00000481570 CHGAP10645 457 aaKnown RBP15.79■□□□□ 0.12
COL1A2-208ENST00000481570 ESF1Q9H501 851 aaKnown RBP15.76■□□□□ 0.11
COL1A2-208ENST00000481570 STAG3Q9UJ98 1225 aa15.72■□□□□ 0.11
COL1A2-208ENST00000481570 CHIC2Q9UKJ5 165 aa15.67■□□□□ 0.1
COL1A2-208ENST00000481570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.66■□□□□ 0.1
COL1A2-208ENST00000481570 NPM1P06748 294 aaKnown RBP eCLIP15.64■□□□□ 0.09
COL1A2-208ENST00000481570 TONSLQ96HA7 1378 aa15.63■□□□□ 0.09
COL1A2-208ENST00000481570 NPM2Q86SE8 214 aaKnown RBP15.63■□□□□ 0.09
COL1A2-208ENST00000481570 SALL2Q9Y467 1007 aaPredicted RBP15.6■□□□□ 0.09
COL1A2-208ENST00000481570 FAM9BQ8IZU0 186 aa15.57■□□□□ 0.08
COL1A2-208ENST00000481570 DDX10Q13206 875 aaKnown RBP15.56■□□□□ 0.08
COL1A2-208ENST00000481570 SENP3Q9H4L4 574 aaPredicted RBP15.56■□□□□ 0.08
COL1A2-208ENST00000481570 ACIN1Q9UKV3 1341 aaKnown RBP15.54■□□□□ 0.08
COL1A2-208ENST00000481570 KDM2AQ9Y2K7 1162 aa15.53■□□□□ 0.08
COL1A2-208ENST00000481570 HNRNPUQ00839 825 aaKnown RBP eCLIP15.52■□□□□ 0.08
COL1A2-208ENST00000481570 ANP32AP39687 249 aaKnown RBP15.52■□□□□ 0.07
COL1A2-208ENST00000481570 FKBP8Q14318 412 aa15.52■□□□□ 0.07
COL1A2-208ENST00000481570 CHMP7Q8WUX9 453 aaPredicted RBP15.5■□□□□ 0.07
COL1A2-208ENST00000481570 ZCCHC6Q5VYS8 1495 aaKnown RBP15.49■□□□□ 0.07
COL1A2-208ENST00000481570 SCAF1Q9H7N4 1312 aaKnown RBP15.46■□□□□ 0.07
COL1A2-208ENST00000481570 PLEKHG5O94827 1062 aa15.45■□□□□ 0.06
COL1A2-208ENST00000481570 TSPY4P0CV99 314 aa15.44■□□□□ 0.06
COL1A2-208ENST00000481570 TSPY10P0CW01 314 aa15.44■□□□□ 0.06
COL1A2-208ENST00000481570 HIRIP3Q9BW71 556 aaPredicted RBP15.44■□□□□ 0.06
COL1A2-208ENST00000481570 MTUS2Q5JR59 1369 aa15.43■□□□□ 0.06
COL1A2-208ENST00000481570 TMC1Q8TDI8 760 aa15.42■□□□□ 0.06
COL1A2-208ENST00000481570 KCNH8Q96L42 1107 aa15.42■□□□□ 0.06
COL1A2-208ENST00000481570 HSP90AA1P07900 732 aaKnown RBP15.41■□□□□ 0.06
COL1A2-208ENST00000481570 RRP7BPQ9NSQ0 103 aa15.4■□□□□ 0.06
COL1A2-208ENST00000481570 ZBTB7CA1YPR0 619 aa15.39■□□□□ 0.05
COL1A2-208ENST00000481570 WDR43Q15061 677 aaKnown RBP eCLIP15.38■□□□□ 0.05
COL1A2-208ENST00000481570 A0A0G2JS52 829 aa15.37■□□□□ 0.05
COL1A2-208ENST00000481570 MRS2Q9HD23 443 aa15.34■□□□□ 0.05
COL1A2-208ENST00000481570 DCAF1Q9Y4B6 1507 aa15.33■□□□□ 0.04
COL1A2-208ENST00000481570 CLIP1P30622 1438 aa15.32■□□□□ 0.04
COL1A2-208ENST00000481570 UPF2Q9HAU5 1272 aaKnown RBP15.32■□□□□ 0.04
COL1A2-208ENST00000481570 C14orf37Q86TY3 774 aa15.31■□□□□ 0.04
COL1A2-208ENST00000481570 IRX6P78412 446 aaPredicted RBP15.31■□□□□ 0.04
COL1A2-208ENST00000481570 CCDC136Q96JN2 1154 aa15.3■□□□□ 0.04
COL1A2-208ENST00000481570 PPP1R15AO75807 674 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms