RNA–Protein interactions for RNA: ENST00000480464.2

TARDBP-209, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-209ENST00000480464 TIA1P31483 386 aaKnown RBP eCLIP3.97□□□□□ -1.772e-8■■■■■ 33
TARDBP-209ENST00000480464 KHSRPQ92945 711 aaKnown RBP eCLIP12.59□□□□□ -0.391e-10■■■■□ 25
TARDBP-209ENST00000480464 TIAL1Q01085 375 aaKnown RBP eCLIP5.15□□□□□ -1.595e-6■■■■□ 19.9
TARDBP-209ENST00000480464 CPSF6Q16630 551 aaKnown RBP eCLIP7.9□□□□□ -1.148e-8■■■□□ 17.3
TARDBP-209ENST00000480464 SF3B4Q15427 424 aaKnown RBP eCLIP4.31□□□□□ -1.728e-7■■□□□ 12.3
TARDBP-209ENST00000480464 RBFOX2O43251 390 aaKnown RBP eCLIP2.7□□□□□ -1.989e-6■□□□□ 10.7
TARDBP-209ENST00000480464 U2AF2P26368 475 aaKnown RBP eCLIP2.82□□□□□ -1.968e-15■□□□□ 10.4
TARDBP-209ENST00000480464 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.9□□□□□ -1.33e-6■□□□□ 10.1
TARDBP-209ENST00000480464 ZRANB2O95218 330 aaKnown RBP eCLIP5.67□□□□□ -1.58e-10■□□□□ 10
TARDBP-209ENST00000480464 SRSF1Q07955 248 aaKnown RBP eCLIP4.78□□□□□ -1.642e-6■□□□□ 9.7
TARDBP-209ENST00000480464 QKIQ96PU8 341 aaKnown RBP eCLIP2.47□□□□□ -2.013e-6■□□□□ 9.1
TARDBP-209ENST00000480464 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.89□□□□□ -1.477e-8■□□□□ 8.3
Retrieved 12 of 12 RNA–protein pairs in 4.4 ms