RNA–Protein interactions for RNA: ENST00000473856.5

ZCCHC11-210, Transcript of Terminal uridylyltransferase 4, humanhuman

TSL 1 (best)

Gene ZCCHC11, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC11-210ENST00000473856 NISCHQ9Y2I1 1504 aa42.36■■■■■ 4.37
ZCCHC11-210ENST00000473856 CCDC180Q9P1Z9 1646 aa36.41■■■■□ 3.42
ZCCHC11-210ENST00000473856 ZCCHC6Q5VYS8 1495 aaKnown RBP35.86■■■■□ 3.33
ZCCHC11-210ENST00000473856 SHROOM4Q9ULL8 1493 aa35.38■■■■□ 3.25
ZCCHC11-210ENST00000473856 DCAF1Q9Y4B6 1507 aa35.07■■■■□ 3.21
ZCCHC11-210ENST00000473856 SUPT5HO00267 1087 aaKnown RBP34.67■■■■□ 3.14
ZCCHC11-210ENST00000473856 DCAF8L2P0C7V8 631 aa34.54■■■■□ 3.12
ZCCHC11-210ENST00000473856 MYO15BQ96JP2 1530 aa34.2■■■■□ 3.06
ZCCHC11-210ENST00000473856 CHIC1Q5VXU3 224 aa33.84■■■■□ 3.01
ZCCHC11-210ENST00000473856 ABCC9O60706 1549 aa33.84■■■■□ 3.01
ZCCHC11-210ENST00000473856 SCRIBQ14160 1630 aa33.62■■■□□ 2.97
ZCCHC11-210ENST00000473856 NACADO15069 1562 aa33.61■■■□□ 2.97
ZCCHC11-210ENST00000473856 RSF1Q96T23 1441 aaPredicted RBP33.32■■■□□ 2.92
ZCCHC11-210ENST00000473856 RB1CC1Q8TDY2 1594 aa33.13■■■□□ 2.89
ZCCHC11-210ENST00000473856 CECR2Q9BXF3 1484 aa32.76■■■□□ 2.83
ZCCHC11-210ENST00000473856 MROH2BQ7Z745 1585 aa32.75■■■□□ 2.83
ZCCHC11-210ENST00000473856 BAZ1AQ9NRL2 1556 aaPredicted RBP32.66■■■□□ 2.82
ZCCHC11-210ENST00000473856 HRCP23327 699 aa32.58■■■□□ 2.81
ZCCHC11-210ENST00000473856 WIZO95785 1651 aa32.58■■■□□ 2.81
ZCCHC11-210ENST00000473856 LOC105371045A0A1W2PR82 267 aa32.55■■■□□ 2.8
ZCCHC11-210ENST00000473856 TRIM41Q8WV44 630 aa32.55■■■□□ 2.8
ZCCHC11-210ENST00000473856 PCGF6Q9BYE7 350 aa32.46■■■□□ 2.79
ZCCHC11-210ENST00000473856 UNC13AQ9UPW8 1703 aa32.4■■■□□ 2.78
ZCCHC11-210ENST00000473856 SMARCA4P51532 1647 aa32.32■■■□□ 2.77
ZCCHC11-210ENST00000473856 TOP2AP11388 1531 aaKnown RBP32.3■■■□□ 2.76
ZCCHC11-210ENST00000473856 EIF4G1Q04637 1599 aaKnown RBP32.26■■■□□ 2.76
ZCCHC11-210ENST00000473856 TRIM26Q12899 539 aaPredicted RBP32.2■■■□□ 2.75
ZCCHC11-210ENST00000473856 SMARCA2P51531 1590 aa32.01■■■□□ 2.72
ZCCHC11-210ENST00000473856 BICRAQ9NZM4 1560 aa31.95■■■□□ 2.7
ZCCHC11-210ENST00000473856 CCDC88BA6NC98 1476 aa31.95■■■□□ 2.7
ZCCHC11-210ENST00000473856 FAM9AQ8IZU1 332 aaPredicted RBP31.93■■■□□ 2.7
ZCCHC11-210ENST00000473856 PEG3Q9GZU2 1588 aa31.89■■■□□ 2.7
ZCCHC11-210ENST00000473856 ABCC8Q09428 1581 aa31.68■■■□□ 2.66
ZCCHC11-210ENST00000473856 ZEB1P37275 1124 aaPredicted RBP31.65■■■□□ 2.66
ZCCHC11-210ENST00000473856 EEA1Q15075 1411 aa31.64■■■□□ 2.66
ZCCHC11-210ENST00000473856 PABPN1Q86U42 306 aaKnown RBP eCLIP31.56■■■□□ 2.64
ZCCHC11-210ENST00000473856 PPARGC1BQ86YN6 1023 aaKnown RBP31.49■■■□□ 2.63
ZCCHC11-210ENST00000473856 ATAD2BQ9ULI0 1458 aa31.45■■■□□ 2.63
ZCCHC11-210ENST00000473856 EHMT2Q96KQ7 1210 aa31.41■■■□□ 2.62
ZCCHC11-210ENST00000473856 WRNQ14191 1432 aaPredicted RBP eCLIP31.39■■■□□ 2.62
ZCCHC11-210ENST00000473856 BAZ1BQ9UIG0 1483 aaKnown RBP31.38■■■□□ 2.61
ZCCHC11-210ENST00000473856 TNIKQ9UKE5 1360 aa31.35■■■□□ 2.61
ZCCHC11-210ENST00000473856 SOGA1O94964 1423 aa31.32■■■□□ 2.6
ZCCHC11-210ENST00000473856 CEP162Q5TB80 1403 aa31.27■■■□□ 2.6
ZCCHC11-210ENST00000473856 CSRNP3Q8WYN3 585 aa31.25■■■□□ 2.59
ZCCHC11-210ENST00000473856 GOLGA3Q08378 1498 aa31.23■■■□□ 2.59
ZCCHC11-210ENST00000473856 SYNJ1O43426 1573 aa31.17■■■□□ 2.58
ZCCHC11-210ENST00000473856 KIF21BO75037 1637 aa31.14■■■□□ 2.58
ZCCHC11-210ENST00000473856 RUSC2Q8N2Y8 1516 aa31.1■■■□□ 2.57
ZCCHC11-210ENST00000473856 CEP164Q9UPV0 1460 aa31.1■■■□□ 2.57
ZCCHC11-210ENST00000473856 HMGXB3Q12766 1538 aa31.08■■■□□ 2.57
ZCCHC11-210ENST00000473856 TOP2BQ02880 1626 aa30.98■■■□□ 2.55
ZCCHC11-210ENST00000473856 NCAPD3P42695 1498 aa30.98■■■□□ 2.55
ZCCHC11-210ENST00000473856 UBTFP17480 764 aaKnown RBP30.98■■■□□ 2.55
ZCCHC11-210ENST00000473856 BIVM-ERCC5R4GMW8 1640 aa30.94■■■□□ 2.54
ZCCHC11-210ENST00000473856 CLIP1P30622 1438 aa30.74■■■□□ 2.51
ZCCHC11-210ENST00000473856 ERICH3Q5RHP9 1530 aa30.71■■■□□ 2.51
ZCCHC11-210ENST00000473856 CCER1Q8TC90 406 aaPredicted RBP30.71■■■□□ 2.51
ZCCHC11-210ENST00000473856 VPS8Q8N3P4 1428 aa30.67■■■□□ 2.5
ZCCHC11-210ENST00000473856 RAPGEF2Q9Y4G8 1499 aa30.65■■■□□ 2.5
ZCCHC11-210ENST00000473856 PRDM2Q13029 1718 aa30.65■■■□□ 2.5
ZCCHC11-210ENST00000473856 CFTRP13569 1480 aa30.64■■■□□ 2.5
ZCCHC11-210ENST00000473856 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.62■■■□□ 2.49
ZCCHC11-210ENST00000473856 PRXQ9BXM0 1461 aa30.55■■■□□ 2.48
ZCCHC11-210ENST00000473856 CUX1P39880 1505 aa30.55■■■□□ 2.48
ZCCHC11-210ENST00000473856 KIF27Q86VH2 1401 aa30.48■■■□□ 2.47
ZCCHC11-210ENST00000473856 APLP2Q06481 763 aa30.44■■■□□ 2.46
ZCCHC11-210ENST00000473856 TTBK1Q5TCY1 1321 aaPredicted RBP30.44■■■□□ 2.46
ZCCHC11-210ENST00000473856 CADPSQ9ULU8 1353 aa30.27■■■□□ 2.44
ZCCHC11-210ENST00000473856 ARAP1Q96P48 1450 aa30.26■■■□□ 2.43
ZCCHC11-210ENST00000473856 CC2D2AQ9P2K1 1620 aa30.14■■■□□ 2.42
ZCCHC11-210ENST00000473856 CUX2O14529 1486 aa30.09■■■□□ 2.41
ZCCHC11-210ENST00000473856 HNRNPUL2Q1KMD3 747 aaKnown RBP30.05■■■□□ 2.4
ZCCHC11-210ENST00000473856 FGD5Q6ZNL6 1462 aa30.04■■■□□ 2.4
ZCCHC11-210ENST00000473856 RANGAP1P46060 587 aaPredicted RBP30.03■■■□□ 2.4
ZCCHC11-210ENST00000473856 DIEXFQ68CQ4 756 aaKnown RBP30.03■■■□□ 2.4
ZCCHC11-210ENST00000473856 ARHGAP35Q9NRY4 1499 aa30.03■■■□□ 2.4
ZCCHC11-210ENST00000473856 IGF1RP08069 1367 aa30.01■■■□□ 2.39
ZCCHC11-210ENST00000473856 CLSPNQ9HAW4 1339 aa29.98■■■□□ 2.39
ZCCHC11-210ENST00000473856 RRBP1Q9P2E9 1410 aaKnown RBP29.96■■■□□ 2.39
ZCCHC11-210ENST00000473856 FANCD2Q9BXW9 1451 aa29.96■■■□□ 2.39
ZCCHC11-210ENST00000473856 MAP3K1Q13233 1512 aa29.96■■■□□ 2.39
ZCCHC11-210ENST00000473856 ZNF316A6NFI3 1004 aaPredicted RBP29.95■■■□□ 2.38
ZCCHC11-210ENST00000473856 DNMBPQ6XZF7 1577 aa29.94■■■□□ 2.38
ZCCHC11-210ENST00000473856 CARMIL1Q5VZK9 1371 aa29.92■■■□□ 2.38
ZCCHC11-210ENST00000473856 ABCA10Q8WWZ4 1543 aa29.83■■■□□ 2.37
ZCCHC11-210ENST00000473856 KANK4Q5T7N3 995 aaPredicted RBP29.81■■■□□ 2.36
ZCCHC11-210ENST00000473856 TIAM1Q13009 1591 aa29.79■■■□□ 2.36
ZCCHC11-210ENST00000473856 CUL7Q14999 1698 aa29.78■■■□□ 2.36
ZCCHC11-210ENST00000473856 FHAD1B1AJZ9 1412 aa29.78■■■□□ 2.36
ZCCHC11-210ENST00000473856 TOPBP1Q92547 1522 aa29.77■■■□□ 2.36
ZCCHC11-210ENST00000473856 LAMC3Q9Y6N6 1575 aa29.77■■■□□ 2.36
ZCCHC11-210ENST00000473856 CCNB3Q8WWL7 1395 aa29.76■■■□□ 2.35
ZCCHC11-210ENST00000473856 CENPBP07199 599 aaPredicted RBP29.74■■■□□ 2.35
ZCCHC11-210ENST00000473856 EFCAB5A4FU69 1503 aa29.72■■■□□ 2.35
ZCCHC11-210ENST00000473856 DHX57Q6P158 1386 aaKnown RBP29.71■■■□□ 2.35
ZCCHC11-210ENST00000473856 POLA1P09884 1462 aaPredicted RBP29.71■■■□□ 2.35
ZCCHC11-210ENST00000473856 SCAF1Q9H7N4 1312 aaKnown RBP29.7■■■□□ 2.34
ZCCHC11-210ENST00000473856 ACIN1Q9UKV3 1341 aaKnown RBP29.69■■■□□ 2.34
ZCCHC11-210ENST00000473856 CFAP43Q8NDM7 1665 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 273.5 ms