RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 AEBP2Q6ZN18 517 aaPredicted RBP16.27■□□□□ 0.2
CLCC1-208ENST00000473062 CHIC1Q5VXU3 224 aa16.21■□□□□ 0.19
CLCC1-208ENST00000473062 POTEDQ86YR6 584 aa14.6□□□□□ -0.07
CLCC1-208ENST00000473062 PHF23Q9BUL5 403 aaPredicted RBP14.12□□□□□ -0.15
CLCC1-208ENST00000473062 SENP3Q9H4L4 574 aaPredicted RBP14.05□□□□□ -0.16
CLCC1-208ENST00000473062 PLPPR3Q6T4P5 718 aa13.34□□□□□ -0.27
CLCC1-208ENST00000473062 FOXD1Q16676 465 aa12.83□□□□□ -0.36
CLCC1-208ENST00000473062 ADRA2BP18089 450 aa12.43□□□□□ -0.42
CLCC1-208ENST00000473062 PPP6R1Q9UPN7 881 aa12.38□□□□□ -0.43
CLCC1-208ENST00000473062 PIAS4Q8N2W9 510 aaPredicted RBP12.24□□□□□ -0.45
CLCC1-208ENST00000473062 MSH5O43196 834 aa11.99□□□□□ -0.49
CLCC1-208ENST00000473062 SCAF1Q9H7N4 1312 aaKnown RBP11.68□□□□□ -0.54
CLCC1-208ENST00000473062 PPP4R3CPQ6ZMV5 832 aa11.68□□□□□ -0.54
CLCC1-208ENST00000473062 NCBP3Q53F19 620 aaKnown RBP11.6□□□□□ -0.55
CLCC1-208ENST00000473062 KCNA4P22459 653 aa11.52□□□□□ -0.57
CLCC1-208ENST00000473062 CNKSR2Q8WXI2 1034 aa11.39□□□□□ -0.59
CLCC1-208ENST00000473062 NPM3O75607 178 aaKnown RBP11.22□□□□□ -0.61
CLCC1-208ENST00000473062 CACNB1Q02641 598 aaPredicted RBP11.19□□□□□ -0.62
CLCC1-208ENST00000473062 MAPK8IP2Q13387 824 aaPredicted RBP11.17□□□□□ -0.62
CLCC1-208ENST00000473062 DMRT2Q9Y5R5 561 aa11.17□□□□□ -0.62
CLCC1-208ENST00000473062 RNF216Q9NWF9 866 aaPredicted RBP11.13□□□□□ -0.63
CLCC1-208ENST00000473062 SLC4A1APQ9BWU0 796 aaKnown RBP11.11□□□□□ -0.63
CLCC1-208ENST00000473062 POTEHQ6S545 545 aa11.08□□□□□ -0.64
CLCC1-208ENST00000473062 DNAJC5BQ9UF47 199 aa11.01□□□□□ -0.65
CLCC1-208ENST00000473062 HOXD11P31277 338 aaPredicted RBP11□□□□□ -0.65
CLCC1-208ENST00000473062 EHMT2Q96KQ7 1210 aa10.9□□□□□ -0.66
CLCC1-208ENST00000473062 DCAF8L1A6NGE4 600 aa10.69□□□□□ -0.7
CLCC1-208ENST00000473062 FOXD4L1Q9NU39 408 aa10.69□□□□□ -0.7
CLCC1-208ENST00000473062 CSRNP3Q8WYN3 585 aa10.66□□□□□ -0.7
CLCC1-208ENST00000473062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.54□□□□□ -0.72
CLCC1-208ENST00000473062 ZBTB22O15209 634 aa10.51□□□□□ -0.73
CLCC1-208ENST00000473062 MYCNP04198 464 aaPredicted RBP10.49□□□□□ -0.73
CLCC1-208ENST00000473062 SLC4A2P04920 1241 aa10.49□□□□□ -0.73
CLCC1-208ENST00000473062 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.47□□□□□ -0.73
CLCC1-208ENST00000473062 HNRNPUL2Q1KMD3 747 aaKnown RBP10.47□□□□□ -0.73
CLCC1-208ENST00000473062 ATXN8OSP0DMR3 200 aa10.38□□□□□ -0.75
CLCC1-208ENST00000473062 APLP2Q06481 763 aa10.38□□□□□ -0.75
CLCC1-208ENST00000473062 SAMD1Q6SPF0 538 aaPredicted RBP10.37□□□□□ -0.75
CLCC1-208ENST00000473062 U3KPZ7 1027 aaPredicted RBP10.27□□□□□ -0.77
CLCC1-208ENST00000473062 RNF39Q9H2S5 420 aa10.17□□□□□ -0.78
CLCC1-208ENST00000473062 C1QBPQ07021 282 aaKnown RBP10.16□□□□□ -0.78
CLCC1-208ENST00000473062 ZNF219Q9P2Y4 722 aaPredicted RBP10.08□□□□□ -0.8
CLCC1-208ENST00000473062 CAPN15O75808 1086 aa9.97□□□□□ -0.81
CLCC1-208ENST00000473062 ATF5Q9Y2D1 282 aaPredicted RBP9.95□□□□□ -0.82
CLCC1-208ENST00000473062 TRHP20396 242 aaPredicted RBP9.93□□□□□ -0.82
CLCC1-208ENST00000473062 SPINK5Q9NQ38 1064 aaPredicted RBP9.88□□□□□ -0.83
CLCC1-208ENST00000473062 ZBTB12Q9Y330 459 aaPredicted RBP9.87□□□□□ -0.83
CLCC1-208ENST00000473062 FBLN2P98095 1184 aa9.84□□□□□ -0.83
CLCC1-208ENST00000473062 PLSCR2Q9NRY7 297 aa9.84□□□□□ -0.83
CLCC1-208ENST00000473062 POLA2Q14181 598 aa9.79□□□□□ -0.84
CLCC1-208ENST00000473062 FKBP8Q14318 412 aa9.71□□□□□ -0.86
CLCC1-208ENST00000473062 DSG3P32926 999 aa9.7□□□□□ -0.86
CLCC1-208ENST00000473062 ABCB7O75027 752 aa9.69□□□□□ -0.86
CLCC1-208ENST00000473062 SPDYE4A6NLX3 237 aa9.59□□□□□ -0.87
CLCC1-208ENST00000473062 MKRN4PQ13434 485 aaPredicted RBP9.57□□□□□ -0.88
CLCC1-208ENST00000473062 SP7Q8TDD2 431 aaPredicted RBP9.56□□□□□ -0.88
CLCC1-208ENST00000473062 SPDYE2BA6NHP3 402 aa9.51□□□□□ -0.89
CLCC1-208ENST00000473062 SPDYE6P0CI01 402 aa9.51□□□□□ -0.89
CLCC1-208ENST00000473062 SPDYE2Q495Y8 402 aa9.51□□□□□ -0.89
CLCC1-208ENST00000473062 FBXO3Q9UK99 471 aa9.5□□□□□ -0.89
CLCC1-208ENST00000473062 RBM42Q9BTD8 480 aaKnown RBP9.45□□□□□ -0.9
CLCC1-208ENST00000473062 ZNF692Q9BU19 519 aaPredicted RBP9.45□□□□□ -0.9
CLCC1-208ENST00000473062 OSCARQ8IYS5 282 aa9.44□□□□□ -0.9
CLCC1-208ENST00000473062 PROM2Q8N271 834 aa9.4□□□□□ -0.9
CLCC1-208ENST00000473062 SSUH2Q9Y2M2 353 aa9.37□□□□□ -0.91
CLCC1-208ENST00000473062 STAG3Q9UJ98 1225 aa9.33□□□□□ -0.92
CLCC1-208ENST00000473062 PABPN1Q86U42 306 aaKnown RBP eCLIP9.29□□□□□ -0.92
CLCC1-208ENST00000473062 AKT1S1Q96B36 256 aa9.28□□□□□ -0.92
CLCC1-208ENST00000473062 AMER1Q5JTC6 1135 aaPredicted RBP9.26□□□□□ -0.93
CLCC1-208ENST00000473062 PLEKHG5O94827 1062 aa9.23□□□□□ -0.93
CLCC1-208ENST00000473062 VASPP50552 380 aaPredicted RBP9.23□□□□□ -0.93
CLCC1-208ENST00000473062 SPDYE1Q8NFV5 336 aaPredicted RBP9.21□□□□□ -0.94
CLCC1-208ENST00000473062 ZBTB47Q9UFB7 747 aaPredicted RBP9.16□□□□□ -0.94
CLCC1-208ENST00000473062 PLCD3Q8N3E9 789 aa9.13□□□□□ -0.95
CLCC1-208ENST00000473062 REM2Q8IYK8 340 aaPredicted RBP9.11□□□□□ -0.95
CLCC1-208ENST00000473062 MIER1Q8N108 512 aa9.09□□□□□ -0.95
CLCC1-208ENST00000473062 KLHL34Q8N239 644 aa9.08□□□□□ -0.96
CLCC1-208ENST00000473062 CLEC11AQ9Y240 323 aa9.07□□□□□ -0.96
CLCC1-208ENST00000473062 PRR29P0C7W0 189 aa9.06□□□□□ -0.96
CLCC1-208ENST00000473062 SPOCK2Q92563 424 aa9.03□□□□□ -0.96
CLCC1-208ENST00000473062 RTN4Q9NQC3 1192 aaKnown RBP9.03□□□□□ -0.96
CLCC1-208ENST00000473062 IFNLR1Q8IU57 520 aaPredicted RBP9.01□□□□□ -0.97
CLCC1-208ENST00000473062 PITPNM1O00562 1244 aa8.97□□□□□ -0.97
CLCC1-208ENST00000473062 NPM1P06748 294 aaKnown RBP eCLIP8.92□□□□□ -0.98
CLCC1-208ENST00000473062 TRIM41Q8WV44 630 aa8.9□□□□□ -0.98
CLCC1-208ENST00000473062 LHX8Q68G74 356 aa8.89□□□□□ -0.99
CLCC1-208ENST00000473062 GSE1Q14687 1217 aa8.87□□□□□ -0.99
CLCC1-208ENST00000473062 CREBZFQ9NS37 354 aa8.87□□□□□ -0.99
CLCC1-208ENST00000473062 CHRDL2Q6WN34 429 aa8.86□□□□□ -0.99
CLCC1-208ENST00000473062 FAM212AQ96EL1 285 aa8.85□□□□□ -0.99
CLCC1-208ENST00000473062 CIZ1Q9ULV3 898 aaPredicted RBP8.82□□□□□ -1
CLCC1-208ENST00000473062 FXR2P51116 673 aaKnown RBP eCLIP8.8□□□□□ -1
CLCC1-208ENST00000473062 ECM2O94769 699 aaPredicted RBP8.79□□□□□ -1
CLCC1-208ENST00000473062 PRKAR2AP13861 404 aaKnown RBP8.79□□□□□ -1
CLCC1-208ENST00000473062 TAOK2Q9UL54 1235 aa8.79□□□□□ -1
CLCC1-208ENST00000473062 PAK3O75914 559 aaPredicted RBP8.77□□□□□ -1.01
CLCC1-208ENST00000473062 PKD2Q13563 968 aa8.77□□□□□ -1.01
CLCC1-208ENST00000473062 FARP1Q9Y4F1 1045 aaPredicted RBP8.77□□□□□ -1.01
CLCC1-208ENST00000473062 MNX1P50219 401 aaPredicted RBP8.76□□□□□ -1.01
CLCC1-208ENST00000473062 NUBP1P53384 320 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms