RNA–Protein interactions for RNA: ENST00000462550.5

GNL3-204, Transcript of G protein nucleolar 3, humanhuman

TSL 2

Gene GNL3, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNL3-204ENST00000462550 AEBP2Q6ZN18 517 aaPredicted RBP30.31■■■□□ 2.44
GNL3-204ENST00000462550 CHIC1Q5VXU3 224 aa29.66■■■□□ 2.34
GNL3-204ENST00000462550 PHF23Q9BUL5 403 aaPredicted RBP26.05■■□□□ 1.76
GNL3-204ENST00000462550 SENP3Q9H4L4 574 aaPredicted RBP25.76■■□□□ 1.71
GNL3-204ENST00000462550 PLPPR3Q6T4P5 718 aa24.1■■□□□ 1.45
GNL3-204ENST00000462550 FOXD1Q16676 465 aa23.87■■□□□ 1.41
GNL3-204ENST00000462550 PPP6R1Q9UPN7 881 aa22.98■■□□□ 1.27
GNL3-204ENST00000462550 ADRA2BP18089 450 aa22.95■■□□□ 1.26
GNL3-204ENST00000462550 PIAS4Q8N2W9 510 aaPredicted RBP22.52■■□□□ 1.2
GNL3-204ENST00000462550 MSH5O43196 834 aa22.04■■□□□ 1.12
GNL3-204ENST00000462550 PPP4R3CPQ6ZMV5 832 aa21.22■□□□□ 0.99
GNL3-204ENST00000462550 SCAF1Q9H7N4 1312 aaKnown RBP21.04■□□□□ 0.96
GNL3-204ENST00000462550 MAPK8IP2Q13387 824 aaPredicted RBP20.81■□□□□ 0.92
GNL3-204ENST00000462550 KCNA4P22459 653 aa20.74■□□□□ 0.91
GNL3-204ENST00000462550 NCBP3Q53F19 620 aaKnown RBP20.7■□□□□ 0.9
GNL3-204ENST00000462550 NISCHQ9Y2I1 1504 aa20.69■□□□□ 0.9
GNL3-204ENST00000462550 CNKSR2Q8WXI2 1034 aa20.64■□□□□ 0.89
GNL3-204ENST00000462550 DMRT2Q9Y5R5 561 aa20.56■□□□□ 0.88
GNL3-204ENST00000462550 NPM3O75607 178 aaKnown RBP20.36■□□□□ 0.85
GNL3-204ENST00000462550 RNF216Q9NWF9 866 aaPredicted RBP20.23■□□□□ 0.83
GNL3-204ENST00000462550 HOXD11P31277 338 aaPredicted RBP20.15■□□□□ 0.82
GNL3-204ENST00000462550 POTEDQ86YR6 584 aa20.13■□□□□ 0.81
GNL3-204ENST00000462550 DNAJC5BQ9UF47 199 aa19.84■□□□□ 0.77
GNL3-204ENST00000462550 SLC4A1APQ9BWU0 796 aaKnown RBP19.77■□□□□ 0.76
GNL3-204ENST00000462550 DCAF8L1A6NGE4 600 aa19.63■□□□□ 0.73
GNL3-204ENST00000462550 SLC4A2P04920 1241 aa19.22■□□□□ 0.67
GNL3-204ENST00000462550 EHMT2Q96KQ7 1210 aa19.2■□□□□ 0.66
GNL3-204ENST00000462550 ABCC9O60706 1549 aa19.19■□□□□ 0.66
GNL3-204ENST00000462550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.18■□□□□ 0.66
GNL3-204ENST00000462550 FOXD4L1Q9NU39 408 aa19.11■□□□□ 0.65
GNL3-204ENST00000462550 ZBTB22O15209 634 aa19.08■□□□□ 0.64
GNL3-204ENST00000462550 CSRNP3Q8WYN3 585 aa18.99■□□□□ 0.63
GNL3-204ENST00000462550 RNF39Q9H2S5 420 aa18.88■□□□□ 0.61
GNL3-204ENST00000462550 U3KPZ7 1027 aaPredicted RBP18.87■□□□□ 0.61
GNL3-204ENST00000462550 MYCNP04198 464 aaPredicted RBP18.84■□□□□ 0.61
GNL3-204ENST00000462550 CCDC180Q9P1Z9 1646 aa18.7■□□□□ 0.58
GNL3-204ENST00000462550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.68■□□□□ 0.58
GNL3-204ENST00000462550 HNRNPUL2Q1KMD3 747 aaKnown RBP18.68■□□□□ 0.58
GNL3-204ENST00000462550 C1QBPQ07021 282 aaKnown RBP18.66■□□□□ 0.58
GNL3-204ENST00000462550 SAMD1Q6SPF0 538 aaPredicted RBP18.61■□□□□ 0.57
GNL3-204ENST00000462550 APLP2Q06481 763 aa18.49■□□□□ 0.55
GNL3-204ENST00000462550 ATXN8OSP0DMR3 200 aa18.46■□□□□ 0.55
GNL3-204ENST00000462550 CACNB1Q02641 598 aaPredicted RBP18.36■□□□□ 0.53
GNL3-204ENST00000462550 SPINK5Q9NQ38 1064 aaPredicted RBP18.33■□□□□ 0.52
GNL3-204ENST00000462550 ATF5Q9Y2D1 282 aaPredicted RBP18.3■□□□□ 0.52
GNL3-204ENST00000462550 CAPN15O75808 1086 aa18.25■□□□□ 0.51
GNL3-204ENST00000462550 ZNF219Q9P2Y4 722 aaPredicted RBP18.22■□□□□ 0.51
GNL3-204ENST00000462550 TRHP20396 242 aaPredicted RBP18.17■□□□□ 0.5
GNL3-204ENST00000462550 RB1CC1Q8TDY2 1594 aa18.05■□□□□ 0.48
GNL3-204ENST00000462550 DSG3P32926 999 aa17.96■□□□□ 0.47
GNL3-204ENST00000462550 ABCB7O75027 752 aa17.9■□□□□ 0.46
GNL3-204ENST00000462550 POLA2Q14181 598 aa17.89■□□□□ 0.45
GNL3-204ENST00000462550 NACADO15069 1562 aa17.86■□□□□ 0.45
GNL3-204ENST00000462550 PABPN1Q86U42 306 aaKnown RBP eCLIP17.83■□□□□ 0.44
GNL3-204ENST00000462550 ZBTB12Q9Y330 459 aaPredicted RBP17.64■□□□□ 0.41
GNL3-204ENST00000462550 BICRAQ9NZM4 1560 aa17.6■□□□□ 0.41
GNL3-204ENST00000462550 DCAF8L2P0C7V8 631 aa17.58■□□□□ 0.4
GNL3-204ENST00000462550 FBLN2P98095 1184 aa17.56■□□□□ 0.4
GNL3-204ENST00000462550 UNC13AQ9UPW8 1703 aa17.55■□□□□ 0.4
GNL3-204ENST00000462550 MYO15BQ96JP2 1530 aa17.53■□□□□ 0.4
GNL3-204ENST00000462550 MKRN4PQ13434 485 aaPredicted RBP17.51■□□□□ 0.39
GNL3-204ENST00000462550 DNAJC5Q9H3Z4 198 aa17.42■□□□□ 0.38
GNL3-204ENST00000462550 CECR2Q9BXF3 1484 aa17.37■□□□□ 0.37
GNL3-204ENST00000462550 SHROOM4Q9ULL8 1493 aa17.34■□□□□ 0.37
GNL3-204ENST00000462550 CC2D2AQ9P2K1 1620 aa17.31■□□□□ 0.36
GNL3-204ENST00000462550 OSCARQ8IYS5 282 aa17.29■□□□□ 0.36
GNL3-204ENST00000462550 EIF4G1Q04637 1599 aaKnown RBP17.18■□□□□ 0.34
GNL3-204ENST00000462550 FKBP8Q14318 412 aa17.17■□□□□ 0.34
GNL3-204ENST00000462550 SPDYE2BA6NHP3 402 aa17.16■□□□□ 0.34
GNL3-204ENST00000462550 SPDYE6P0CI01 402 aa17.16■□□□□ 0.34
GNL3-204ENST00000462550 SPDYE2Q495Y8 402 aa17.16■□□□□ 0.34
GNL3-204ENST00000462550 RBM42Q9BTD8 480 aaKnown RBP17.15■□□□□ 0.34
GNL3-204ENST00000462550 SPDYE4A6NLX3 237 aa17.14■□□□□ 0.33
GNL3-204ENST00000462550 DCAF1Q9Y4B6 1507 aa17.11■□□□□ 0.33
GNL3-204ENST00000462550 ZNF692Q9BU19 519 aaPredicted RBP17.07■□□□□ 0.32
GNL3-204ENST00000462550 ZCCHC6Q5VYS8 1495 aaKnown RBP17.03■□□□□ 0.32
GNL3-204ENST00000462550 SSUH2Q9Y2M2 353 aa17.02■□□□□ 0.32
GNL3-204ENST00000462550 SCRIBQ14160 1630 aa16.96■□□□□ 0.3
GNL3-204ENST00000462550 AKT1S1Q96B36 256 aa16.93■□□□□ 0.3
GNL3-204ENST00000462550 PROM2Q8N271 834 aa16.89■□□□□ 0.29
GNL3-204ENST00000462550 CUX2O14529 1486 aa16.79■□□□□ 0.28
GNL3-204ENST00000462550 REM2Q8IYK8 340 aaPredicted RBP16.74■□□□□ 0.27
GNL3-204ENST00000462550 SPDYE1Q8NFV5 336 aaPredicted RBP16.64■□□□□ 0.25
GNL3-204ENST00000462550 STAG3Q9UJ98 1225 aa16.6■□□□□ 0.25
GNL3-204ENST00000462550 FBXO3Q9UK99 471 aa16.59■□□□□ 0.25
GNL3-204ENST00000462550 ERCC6Q03468 1493 aa16.57■□□□□ 0.24
GNL3-204ENST00000462550 NCAPD3P42695 1498 aa16.56■□□□□ 0.24
GNL3-204ENST00000462550 PITPNM1O00562 1244 aa16.55■□□□□ 0.24
GNL3-204ENST00000462550 CLEC11AQ9Y240 323 aa16.53■□□□□ 0.24
GNL3-204ENST00000462550 PRR29P0C7W0 189 aa16.41■□□□□ 0.22
GNL3-204ENST00000462550 CHRDL2Q6WN34 429 aa16.4■□□□□ 0.22
GNL3-204ENST00000462550 ATAD2BQ9ULI0 1458 aa16.4■□□□□ 0.22
GNL3-204ENST00000462550 NESP48681 1621 aa16.36■□□□□ 0.21
GNL3-204ENST00000462550 VASPP50552 380 aaPredicted RBP16.34■□□□□ 0.21
GNL3-204ENST00000462550 HMGXB3Q12766 1538 aa16.31■□□□□ 0.2
GNL3-204ENST00000462550 TRIM41Q8WV44 630 aa16.3■□□□□ 0.2
GNL3-204ENST00000462550 SMARCA2P51531 1590 aa16.27■□□□□ 0.2
GNL3-204ENST00000462550 THOC2Q8NI27 1593 aaKnown RBP16.27■□□□□ 0.2
GNL3-204ENST00000462550 FXR2P51116 673 aaKnown RBP eCLIP16.25■□□□□ 0.19
GNL3-204ENST00000462550 MIER1Q8N108 512 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms