RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 DCAF8L2P0C7V8 631 aa20.63■□□□□ 0.89
SMARCAD1-204ENST00000457823 SUPT5HO00267 1087 aaKnown RBP19.63■□□□□ 0.73
SMARCAD1-204ENST00000457823 NISCHQ9Y2I1 1504 aa19.61■□□□□ 0.73
SMARCAD1-204ENST00000457823 SHROOM4Q9ULL8 1493 aa19.26■□□□□ 0.67
SMARCAD1-204ENST00000457823 EHMT2Q96KQ7 1210 aa18.98■□□□□ 0.63
SMARCAD1-204ENST00000457823 FAM9AQ8IZU1 332 aaPredicted RBP18.53■□□□□ 0.56
SMARCAD1-204ENST00000457823 APLP2Q06481 763 aa18.46■□□□□ 0.55
SMARCAD1-204ENST00000457823 TTBK1Q5TCY1 1321 aaPredicted RBP18.31■□□□□ 0.52
SMARCAD1-204ENST00000457823 PCGF6Q9BYE7 350 aa18.31■□□□□ 0.52
SMARCAD1-204ENST00000457823 PELP1Q8IZL8 1130 aaKnown RBP18.16■□□□□ 0.5
SMARCAD1-204ENST00000457823 RANGAP1P46060 587 aaPredicted RBP18.13■□□□□ 0.49
SMARCAD1-204ENST00000457823 TRIM41Q8WV44 630 aa18.13■□□□□ 0.49
SMARCAD1-204ENST00000457823 CCER1Q8TC90 406 aaPredicted RBP17.91■□□□□ 0.46
SMARCAD1-204ENST00000457823 UBTFP17480 764 aaKnown RBP17.91■□□□□ 0.46
SMARCAD1-204ENST00000457823 ATP1B4Q9UN42 357 aaPredicted RBP17.9■□□□□ 0.46
SMARCAD1-204ENST00000457823 ZEB1P37275 1124 aaPredicted RBP17.82■□□□□ 0.44
SMARCAD1-204ENST00000457823 CENPBP07199 599 aaPredicted RBP17.74■□□□□ 0.43
SMARCAD1-204ENST00000457823 PPARGC1BQ86YN6 1023 aaKnown RBP17.71■□□□□ 0.43
SMARCAD1-204ENST00000457823 LOC105371045A0A1W2PR82 267 aa17.49■□□□□ 0.39
SMARCAD1-204ENST00000457823 YTHDC1Q96MU7 727 aaKnown RBP17.49■□□□□ 0.39
SMARCAD1-204ENST00000457823 TRIM26Q12899 539 aaPredicted RBP17.47■□□□□ 0.39
SMARCAD1-204ENST00000457823 CHIC1Q5VXU3 224 aa17.44■□□□□ 0.38
SMARCAD1-204ENST00000457823 ERICH6Q7L0X2 663 aa17.42■□□□□ 0.38
SMARCAD1-204ENST00000457823 ITGAEP38570 1179 aa17.36■□□□□ 0.37
SMARCAD1-204ENST00000457823 NEFLP07196 543 aa17.35■□□□□ 0.37
SMARCAD1-204ENST00000457823 HRCP23327 699 aa17.28■□□□□ 0.36
SMARCAD1-204ENST00000457823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.26■□□□□ 0.35
SMARCAD1-204ENST00000457823 HNRNPUL2Q1KMD3 747 aaKnown RBP17.26■□□□□ 0.35
SMARCAD1-204ENST00000457823 MYT1LQ9UL68 1186 aa17.13■□□□□ 0.33
SMARCAD1-204ENST00000457823 POLR3GLQ9BT43 218 aa17.13■□□□□ 0.33
SMARCAD1-204ENST00000457823 CNGB1Q14028 1251 aaPredicted RBP17.04■□□□□ 0.32
SMARCAD1-204ENST00000457823 PABPN1Q86U42 306 aaKnown RBP eCLIP17.03■□□□□ 0.32
SMARCAD1-204ENST00000457823 ABCC9O60706 1549 aa16.96■□□□□ 0.31
SMARCAD1-204ENST00000457823 FAM50AQ14320 339 aaKnown RBP16.87■□□□□ 0.29
SMARCAD1-204ENST00000457823 DIEXFQ68CQ4 756 aaKnown RBP16.86■□□□□ 0.29
SMARCAD1-204ENST00000457823 DAXXQ9UER7 740 aaPredicted RBP16.78■□□□□ 0.28
SMARCAD1-204ENST00000457823 TRIM52Q96A61 297 aa16.76■□□□□ 0.27
SMARCAD1-204ENST00000457823 SLC4A1APQ9BWU0 796 aaKnown RBP16.75■□□□□ 0.27
SMARCAD1-204ENST00000457823 NEUROD1Q13562 356 aa16.74■□□□□ 0.27
SMARCAD1-204ENST00000457823 MYT1Q01538 1121 aa16.73■□□□□ 0.27
SMARCAD1-204ENST00000457823 FBLN2P98095 1184 aa16.62■□□□□ 0.25
SMARCAD1-204ENST00000457823 CSRNP3Q8WYN3 585 aa16.6■□□□□ 0.25
SMARCAD1-204ENST00000457823 ZNF326Q5BKZ1 582 aaKnown RBP16.59■□□□□ 0.25
SMARCAD1-204ENST00000457823 P3H3Q8IVL6 736 aa16.57■□□□□ 0.24
SMARCAD1-204ENST00000457823 CLSPNQ9HAW4 1339 aa16.54■□□□□ 0.24
SMARCAD1-204ENST00000457823 ARID3CA6NKF2 412 aa16.51■□□□□ 0.23
SMARCAD1-204ENST00000457823 ANP32CO43423 234 aa16.49■□□□□ 0.23
SMARCAD1-204ENST00000457823 BCANQ96GW7 911 aa16.49■□□□□ 0.23
SMARCAD1-204ENST00000457823 GTF3C3Q9Y5Q9 886 aa16.48■□□□□ 0.23
SMARCAD1-204ENST00000457823 ZNF316A6NFI3 1004 aaPredicted RBP16.47■□□□□ 0.23
SMARCAD1-204ENST00000457823 RTL5Q5HYW3 569 aaPredicted RBP16.38■□□□□ 0.21
SMARCAD1-204ENST00000457823 ZNF777Q9ULD5 760 aaPredicted RBP16.35■□□□□ 0.21
SMARCAD1-204ENST00000457823 SCRIBQ14160 1630 aa16.27■□□□□ 0.2
SMARCAD1-204ENST00000457823 CDK11AQ9UQ88 783 aaPredicted RBP16.26■□□□□ 0.19
SMARCAD1-204ENST00000457823 ACIN1Q9UKV3 1341 aaKnown RBP16.23■□□□□ 0.19
SMARCAD1-204ENST00000457823 BCL11AQ9H165 835 aa16.19■□□□□ 0.18
SMARCAD1-204ENST00000457823 ZCCHC6Q5VYS8 1495 aaKnown RBP16.18■□□□□ 0.18
SMARCAD1-204ENST00000457823 ZBTB47Q9UFB7 747 aaPredicted RBP16.17■□□□□ 0.18
SMARCAD1-204ENST00000457823 CANXP27824 592 aaKnown RBP16.16■□□□□ 0.18
SMARCAD1-204ENST00000457823 SLC24A1O60721 1099 aa16.15■□□□□ 0.18
SMARCAD1-204ENST00000457823 TONSLQ96HA7 1378 aa16.13■□□□□ 0.17
SMARCAD1-204ENST00000457823 DDX10Q13206 875 aaKnown RBP16.12■□□□□ 0.17
SMARCAD1-204ENST00000457823 NEFMP07197 916 aa16.12■□□□□ 0.17
SMARCAD1-204ENST00000457823 CHIC2Q9UKJ5 165 aa16.11■□□□□ 0.17
SMARCAD1-204ENST00000457823 CHGAP10645 457 aaKnown RBP16.08■□□□□ 0.16
SMARCAD1-204ENST00000457823 DCAF1Q9Y4B6 1507 aa16.06■□□□□ 0.16
SMARCAD1-204ENST00000457823 HNRNPUQ00839 825 aaKnown RBP eCLIP16.04■□□□□ 0.16
SMARCAD1-204ENST00000457823 FKBP8Q14318 412 aa16.03■□□□□ 0.16
SMARCAD1-204ENST00000457823 FAM9BQ8IZU0 186 aa16.03■□□□□ 0.16
SMARCAD1-204ENST00000457823 ESF1Q9H501 851 aaKnown RBP16■□□□□ 0.15
SMARCAD1-204ENST00000457823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.99■□□□□ 0.154e-6■□□□□ 11.3
SMARCAD1-204ENST00000457823 SALL2Q9Y467 1007 aaPredicted RBP15.99■□□□□ 0.15
SMARCAD1-204ENST00000457823 NPM1P06748 294 aaKnown RBP eCLIP15.98■□□□□ 0.15
SMARCAD1-204ENST00000457823 STAG3Q9UJ98 1225 aa15.97■□□□□ 0.15
SMARCAD1-204ENST00000457823 NPM2Q86SE8 214 aaKnown RBP15.96■□□□□ 0.15
SMARCAD1-204ENST00000457823 TSPY4P0CV99 314 aa15.96■□□□□ 0.14
SMARCAD1-204ENST00000457823 TSPY10P0CW01 314 aa15.96■□□□□ 0.14
SMARCAD1-204ENST00000457823 ANP32AP39687 249 aaKnown RBP15.96■□□□□ 0.14
SMARCAD1-204ENST00000457823 MTUS2Q5JR59 1369 aa15.94■□□□□ 0.14
SMARCAD1-204ENST00000457823 HIRIP3Q9BW71 556 aaPredicted RBP15.93■□□□□ 0.14
SMARCAD1-204ENST00000457823 KDM2AQ9Y2K7 1162 aa15.93■□□□□ 0.14
SMARCAD1-204ENST00000457823 TMC1Q8TDI8 760 aa15.92■□□□□ 0.14
SMARCAD1-204ENST00000457823 CLIP1P30622 1438 aa15.92■□□□□ 0.14
SMARCAD1-204ENST00000457823 PLPPR3Q6T4P5 718 aa15.91■□□□□ 0.14
SMARCAD1-204ENST00000457823 CHMP7Q8WUX9 453 aaPredicted RBP15.9■□□□□ 0.14
SMARCAD1-204ENST00000457823 MIER1Q8N108 512 aa15.88■□□□□ 0.13
SMARCAD1-204ENST00000457823 MRS2Q9HD23 443 aa15.86■□□□□ 0.13
SMARCAD1-204ENST00000457823 RRP7BPQ9NSQ0 103 aa15.86■□□□□ 0.13
SMARCAD1-204ENST00000457823 RSF1Q96T23 1441 aaPredicted RBP15.86■□□□□ 0.13
SMARCAD1-204ENST00000457823 CCDC136Q96JN2 1154 aa15.8■□□□□ 0.12
SMARCAD1-204ENST00000457823 MYO15BQ96JP2 1530 aa15.8■□□□□ 0.12
SMARCAD1-204ENST00000457823 EIF4G2P78344 907 aaKnown RBP eCLIP15.78■□□□□ 0.12
SMARCAD1-204ENST00000457823 KCNH8Q96L42 1107 aa15.77■□□□□ 0.12
SMARCAD1-204ENST00000457823 CEP162Q5TB80 1403 aa15.76■□□□□ 0.11
SMARCAD1-204ENST00000457823 WDR43Q15061 677 aaKnown RBP eCLIP15.76■□□□□ 0.11
SMARCAD1-204ENST00000457823 HSP90AA1P07900 732 aaKnown RBP15.75■□□□□ 0.11
SMARCAD1-204ENST00000457823 IRX6P78412 446 aaPredicted RBP15.75■□□□□ 0.11
SMARCAD1-204ENST00000457823 PLEKHD1A6NEE1 506 aa15.74■□□□□ 0.11
SMARCAD1-204ENST00000457823 CCDC180Q9P1Z9 1646 aa15.74■□□□□ 0.11
SMARCAD1-204ENST00000457823 UPF2Q9HAU5 1272 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms