RNA–Protein interactions for RNA: ENST00000457683.1

LINC01780-202, Transcript of long intergenic non-protein coding RNA 1780, humanhuman

TSL 3 BASIC

Gene LINC01780, Length 391 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01780-202ENST00000457683 CHIC1Q5VXU3 224 aa25.32■■□□□ 1.64
LINC01780-202ENST00000457683 AEBP2Q6ZN18 517 aaPredicted RBP25.08■■□□□ 1.61
LINC01780-202ENST00000457683 PHF23Q9BUL5 403 aaPredicted RBP22.27■■□□□ 1.16
LINC01780-202ENST00000457683 SENP3Q9H4L4 574 aaPredicted RBP21.28■■□□□ 1
LINC01780-202ENST00000457683 PLPPR3Q6T4P5 718 aa20.92■□□□□ 0.94
LINC01780-202ENST00000457683 FOXD1Q16676 465 aa19.56■□□□□ 0.72
LINC01780-202ENST00000457683 ADRA2BP18089 450 aa19.4■□□□□ 0.7
LINC01780-202ENST00000457683 PPP6R1Q9UPN7 881 aa19.37■□□□□ 0.69
LINC01780-202ENST00000457683 KCNA4P22459 653 aa18.83■□□□□ 0.6
LINC01780-202ENST00000457683 PIAS4Q8N2W9 510 aaPredicted RBP18.62■□□□□ 0.57
LINC01780-202ENST00000457683 PPP4R3CPQ6ZMV5 832 aa18.47■□□□□ 0.55
LINC01780-202ENST00000457683 EHMT2Q96KQ7 1210 aa18.32■□□□□ 0.52
LINC01780-202ENST00000457683 NCBP3Q53F19 620 aaKnown RBP18.29■□□□□ 0.52
LINC01780-202ENST00000457683 SLC4A1APQ9BWU0 796 aaKnown RBP18.11■□□□□ 0.49
LINC01780-202ENST00000457683 NPM3O75607 178 aaKnown RBP17.92■□□□□ 0.46
LINC01780-202ENST00000457683 SCAF1Q9H7N4 1312 aaKnown RBP17.92■□□□□ 0.46
LINC01780-202ENST00000457683 CSRNP3Q8WYN3 585 aa17.89■□□□□ 0.45
LINC01780-202ENST00000457683 MSH5O43196 834 aa17.86■□□□□ 0.45
LINC01780-202ENST00000457683 CNKSR2Q8WXI2 1034 aa17.86■□□□□ 0.45
LINC01780-202ENST00000457683 DNAJC5BQ9UF47 199 aa17.55■□□□□ 0.4
LINC01780-202ENST00000457683 RNF216Q9NWF9 866 aaPredicted RBP17.34■□□□□ 0.37
LINC01780-202ENST00000457683 MAPK8IP2Q13387 824 aaPredicted RBP17.33■□□□□ 0.36
LINC01780-202ENST00000457683 ZBTB22O15209 634 aa17.32■□□□□ 0.36
LINC01780-202ENST00000457683 FOXD4L1Q9NU39 408 aa17.2■□□□□ 0.34
LINC01780-202ENST00000457683 DMRT2Q9Y5R5 561 aa17.09■□□□□ 0.33
LINC01780-202ENST00000457683 HOXD11P31277 338 aaPredicted RBP17.07■□□□□ 0.32
LINC01780-202ENST00000457683 SLC4A2P04920 1241 aa16.74■□□□□ 0.27
LINC01780-202ENST00000457683 ATXN8OSP0DMR3 200 aa16.65■□□□□ 0.26
LINC01780-202ENST00000457683 MYCNP04198 464 aaPredicted RBP16.61■□□□□ 0.25
LINC01780-202ENST00000457683 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.2■□□□□ 0.18
LINC01780-202ENST00000457683 HNRNPUL2Q1KMD3 747 aaKnown RBP16.2■□□□□ 0.18
LINC01780-202ENST00000457683 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.17■□□□□ 0.18
LINC01780-202ENST00000457683 DCAF8L1A6NGE4 600 aa16.14■□□□□ 0.17
LINC01780-202ENST00000457683 SAMD1Q6SPF0 538 aaPredicted RBP16.14■□□□□ 0.17
LINC01780-202ENST00000457683 AMER1Q5JTC6 1135 aaPredicted RBP16.09■□□□□ 0.17
LINC01780-202ENST00000457683 FKBP8Q14318 412 aa16.08■□□□□ 0.16
LINC01780-202ENST00000457683 U3KPZ7 1027 aaPredicted RBP16■□□□□ 0.15
LINC01780-202ENST00000457683 ATF5Q9Y2D1 282 aaPredicted RBP15.97■□□□□ 0.15
LINC01780-202ENST00000457683 RTN4Q9NQC3 1192 aaKnown RBP15.93■□□□□ 0.14
LINC01780-202ENST00000457683 APLP2Q06481 763 aa15.87■□□□□ 0.13
LINC01780-202ENST00000457683 ZNF219Q9P2Y4 722 aaPredicted RBP15.73■□□□□ 0.11
LINC01780-202ENST00000457683 SLC24A1O60721 1099 aa15.67■□□□□ 0.1
LINC01780-202ENST00000457683 FBXO3Q9UK99 471 aa15.46■□□□□ 0.07
LINC01780-202ENST00000457683 SPDYE4A6NLX3 237 aa15.41■□□□□ 0.06
LINC01780-202ENST00000457683 FBLN2P98095 1184 aa15.38■□□□□ 0.05
LINC01780-202ENST00000457683 PROM2Q8N271 834 aa15.37■□□□□ 0.05
LINC01780-202ENST00000457683 MKRN4PQ13434 485 aaPredicted RBP15.36■□□□□ 0.05
LINC01780-202ENST00000457683 RNF39Q9H2S5 420 aa15.33■□□□□ 0.04
LINC01780-202ENST00000457683 TRHP20396 242 aaPredicted RBP15.27■□□□□ 0.04
LINC01780-202ENST00000457683 SPINK5Q9NQ38 1064 aaPredicted RBP15.26■□□□□ 0.03
LINC01780-202ENST00000457683 C1QBPQ07021 282 aaKnown RBP15.25■□□□□ 0.03
LINC01780-202ENST00000457683 POLA2Q14181 598 aa15.24■□□□□ 0.03
LINC01780-202ENST00000457683 ZBTB12Q9Y330 459 aaPredicted RBP15.2■□□□□ 0.02
LINC01780-202ENST00000457683 CAPN15O75808 1086 aa15.19■□□□□ 0.02
LINC01780-202ENST00000457683 VASPP50552 380 aaPredicted RBP15.14■□□□□ 0.01
LINC01780-202ENST00000457683 IFNLR1Q8IU57 520 aaPredicted RBP14.96□□□□□ -0.01
LINC01780-202ENST00000457683 ABCB7O75027 752 aa14.9□□□□□ -0.02
LINC01780-202ENST00000457683 POTEDQ86YR6 584 aa14.83□□□□□ -0.04
LINC01780-202ENST00000457683 STAG3Q9UJ98 1225 aa14.83□□□□□ -0.04
LINC01780-202ENST00000457683 SPDYE2BA6NHP3 402 aa14.82□□□□□ -0.04
LINC01780-202ENST00000457683 SPDYE6P0CI01 402 aa14.82□□□□□ -0.04
LINC01780-202ENST00000457683 DSG3P32926 999 aa14.82□□□□□ -0.04
LINC01780-202ENST00000457683 SPDYE2Q495Y8 402 aa14.82□□□□□ -0.04
LINC01780-202ENST00000457683 PLCB2Q00722 1185 aa14.79□□□□□ -0.04
LINC01780-202ENST00000457683 ZNF692Q9BU19 519 aaPredicted RBP14.79□□□□□ -0.04
LINC01780-202ENST00000457683 SSUH2Q9Y2M2 353 aa14.77□□□□□ -0.05
LINC01780-202ENST00000457683 PKD2Q13563 968 aa14.76□□□□□ -0.05
LINC01780-202ENST00000457683 SPOCK2Q92563 424 aa14.72□□□□□ -0.05
LINC01780-202ENST00000457683 OSCARQ8IYS5 282 aa14.66□□□□□ -0.06
LINC01780-202ENST00000457683 KLHL34Q8N239 644 aa14.66□□□□□ -0.06
LINC01780-202ENST00000457683 DCAF8L2P0C7V8 631 aa14.61□□□□□ -0.07
LINC01780-202ENST00000457683 PABPN1Q86U42 306 aaKnown RBP eCLIP14.6□□□□□ -0.07
LINC01780-202ENST00000457683 PLCD3Q8N3E9 789 aa14.58□□□□□ -0.08
LINC01780-202ENST00000457683 ECM2O94769 699 aaPredicted RBP14.51□□□□□ -0.09
LINC01780-202ENST00000457683 ZBTB47Q9UFB7 747 aaPredicted RBP14.51□□□□□ -0.09
LINC01780-202ENST00000457683 MIER1Q8N108 512 aa14.5□□□□□ -0.09
LINC01780-202ENST00000457683 PLEKHG5O94827 1062 aa14.48□□□□□ -0.09
LINC01780-202ENST00000457683 HAP1P54257 671 aaPredicted RBP14.48□□□□□ -0.09
LINC01780-202ENST00000457683 BBXQ8WY36 941 aaPredicted RBP14.48□□□□□ -0.09
LINC01780-202ENST00000457683 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.45□□□□□ -0.1
LINC01780-202ENST00000457683 VSIG10Q8N0Z9 540 aa14.44□□□□□ -0.1
LINC01780-202ENST00000457683 TRIM41Q8WV44 630 aa14.37□□□□□ -0.11
LINC01780-202ENST00000457683 RGL2O15211 777 aa14.33□□□□□ -0.12
LINC01780-202ENST00000457683 CACNB1Q02641 598 aaPredicted RBP14.33□□□□□ -0.12
LINC01780-202ENST00000457683 NPM1P06748 294 aaKnown RBP eCLIP14.31□□□□□ -0.12
LINC01780-202ENST00000457683 BCANQ96GW7 911 aa14.29□□□□□ -0.12
LINC01780-202ENST00000457683 CIZ1Q9ULV3 898 aaPredicted RBP14.26□□□□□ -0.13
LINC01780-202ENST00000457683 PAXIP1Q6ZW49 1069 aaPredicted RBP14.24□□□□□ -0.13
LINC01780-202ENST00000457683 GSE1Q14687 1217 aa14.21□□□□□ -0.13
LINC01780-202ENST00000457683 SPRYD3Q8NCJ5 442 aa14.21□□□□□ -0.13
LINC01780-202ENST00000457683 RBM42Q9BTD8 480 aaKnown RBP14.19□□□□□ -0.14
LINC01780-202ENST00000457683 SPDYE1Q8NFV5 336 aaPredicted RBP14.18□□□□□ -0.14
LINC01780-202ENST00000457683 CFAP44Q96MT7 982 aa14.17□□□□□ -0.14
LINC01780-202ENST00000457683 AKT1S1Q96B36 256 aa14.16□□□□□ -0.14
LINC01780-202ENST00000457683 DNAJC5Q9H3Z4 198 aa14.14□□□□□ -0.15
LINC01780-202ENST00000457683 CHGAP10645 457 aaKnown RBP14.13□□□□□ -0.15
LINC01780-202ENST00000457683 NISCHQ9Y2I1 1504 aa14.13□□□□□ -0.15
LINC01780-202ENST00000457683 HS6ST3Q8IZP7 471 aa14.12□□□□□ -0.15
LINC01780-202ENST00000457683 KDM2AQ9Y2K7 1162 aa14.12□□□□□ -0.15
LINC01780-202ENST00000457683 TAOK2Q9UL54 1235 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms