RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 NISCHQ9Y2I1 1504 aa36.19■■■■□ 3.38
PTPN6-204ENST00000456013 SHROOM4Q9ULL8 1493 aa30.84■■■□□ 2.53
PTPN6-204ENST00000456013 CCDC180Q9P1Z9 1646 aa30.75■■■□□ 2.51
PTPN6-204ENST00000456013 ZCCHC6Q5VYS8 1495 aaKnown RBP30.68■■■□□ 2.5
PTPN6-204ENST00000456013 SUPT5HO00267 1087 aaKnown RBP30.37■■■□□ 2.45
PTPN6-204ENST00000456013 DCAF1Q9Y4B6 1507 aa29.78■■■□□ 2.36
PTPN6-204ENST00000456013 CHIC1Q5VXU3 224 aa29.75■■■□□ 2.35
PTPN6-204ENST00000456013 MYO15BQ96JP2 1530 aa29.7■■■□□ 2.35
PTPN6-204ENST00000456013 DCAF8L2P0C7V8 631 aa29.7■■■□□ 2.35
PTPN6-204ENST00000456013 HRCP23327 699 aa29.28■■■□□ 2.28
PTPN6-204ENST00000456013 PCGF6Q9BYE7 350 aa29.01■■■□□ 2.23
PTPN6-204ENST00000456013 ABCC9O60706 1549 aa29.01■■■□□ 2.23
PTPN6-204ENST00000456013 LOC105371045A0A1W2PR82 267 aa28.8■■■□□ 2.2
PTPN6-204ENST00000456013 SCRIBQ14160 1630 aa28.72■■■□□ 2.19
PTPN6-204ENST00000456013 RSF1Q96T23 1441 aaPredicted RBP28.7■■■□□ 2.18
PTPN6-204ENST00000456013 PPARGC1BQ86YN6 1023 aaKnown RBP28.51■■■□□ 2.15
PTPN6-204ENST00000456013 TRIM26Q12899 539 aaPredicted RBP28.5■■■□□ 2.15
PTPN6-204ENST00000456013 RB1CC1Q8TDY2 1594 aa28.49■■■□□ 2.15
PTPN6-204ENST00000456013 TRIM41Q8WV44 630 aa28.33■■■□□ 2.13
PTPN6-204ENST00000456013 NACADO15069 1562 aa28.32■■■□□ 2.12
PTPN6-204ENST00000456013 CECR2Q9BXF3 1484 aa28.14■■■□□ 2.1
PTPN6-204ENST00000456013 MROH2BQ7Z745 1585 aa28.11■■■□□ 2.09
PTPN6-204ENST00000456013 ZEB1P37275 1124 aaPredicted RBP28.04■■■□□ 2.08
PTPN6-204ENST00000456013 FAM9AQ8IZU1 332 aaPredicted RBP28.02■■■□□ 2.08
PTPN6-204ENST00000456013 WIZO95785 1651 aa28■■■□□ 2.07
PTPN6-204ENST00000456013 BAZ1AQ9NRL2 1556 aaPredicted RBP27.9■■■□□ 2.06
PTPN6-204ENST00000456013 EIF4G1Q04637 1599 aaKnown RBP27.8■■■□□ 2.04
PTPN6-204ENST00000456013 EHMT2Q96KQ7 1210 aa27.7■■■□□ 2.02
PTPN6-204ENST00000456013 TOP2AP11388 1531 aaKnown RBP27.59■■■□□ 2.01
PTPN6-204ENST00000456013 SMARCA4P51532 1647 aa27.53■■■□□ 2
PTPN6-204ENST00000456013 UNC13AQ9UPW8 1703 aa27.45■■□□□ 1.98
PTPN6-204ENST00000456013 SMARCA2P51531 1590 aa27.44■■□□□ 1.98
PTPN6-204ENST00000456013 CCDC88BA6NC98 1476 aa27.43■■□□□ 1.98
PTPN6-204ENST00000456013 ABCC8Q09428 1581 aa27.42■■□□□ 1.98
PTPN6-204ENST00000456013 WRNQ14191 1432 aaPredicted RBP eCLIP27.33■■□□□ 1.97
PTPN6-204ENST00000456013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.22■■□□□ 1.95
PTPN6-204ENST00000456013 EEA1Q15075 1411 aa27.22■■□□□ 1.95
PTPN6-204ENST00000456013 CEP162Q5TB80 1403 aa27.22■■□□□ 1.95
PTPN6-204ENST00000456013 TNIKQ9UKE5 1360 aa27.19■■□□□ 1.94
PTPN6-204ENST00000456013 CCER1Q8TC90 406 aaPredicted RBP27.19■■□□□ 1.94
PTPN6-204ENST00000456013 SOGA1O94964 1423 aa27.19■■□□□ 1.94
PTPN6-204ENST00000456013 SCAF1Q9H7N4 1312 aaKnown RBP27.08■■□□□ 1.93
PTPN6-204ENST00000456013 CSRNP3Q8WYN3 585 aa27.07■■□□□ 1.92
PTPN6-204ENST00000456013 RUSC2Q8N2Y8 1516 aa27.04■■□□□ 1.92
PTPN6-204ENST00000456013 PEG3Q9GZU2 1588 aa27.04■■□□□ 1.92
PTPN6-204ENST00000456013 BICRAQ9NZM4 1560 aa27.02■■□□□ 1.92
PTPN6-204ENST00000456013 GOLGA3Q08378 1498 aa26.99■■□□□ 1.91
PTPN6-204ENST00000456013 PELP1Q8IZL8 1130 aaKnown RBP26.94■■□□□ 1.9
PTPN6-204ENST00000456013 UBTFP17480 764 aaKnown RBP26.93■■□□□ 1.9
PTPN6-204ENST00000456013 TTBK1Q5TCY1 1321 aaPredicted RBP26.89■■□□□ 1.9
PTPN6-204ENST00000456013 KIF21BO75037 1637 aa26.85■■□□□ 1.89
PTPN6-204ENST00000456013 SYNJ1O43426 1573 aa26.83■■□□□ 1.89
PTPN6-204ENST00000456013 PABPN1Q86U42 306 aaKnown RBP eCLIP26.83■■□□□ 1.89
PTPN6-204ENST00000456013 DIEXFQ68CQ4 756 aaKnown RBP26.83■■□□□ 1.88
PTPN6-204ENST00000456013 CEP164Q9UPV0 1460 aa26.82■■□□□ 1.88
PTPN6-204ENST00000456013 ACIN1Q9UKV3 1341 aaKnown RBP26.8■■□□□ 1.88
PTPN6-204ENST00000456013 ATAD2BQ9ULI0 1458 aa26.72■■□□□ 1.87
PTPN6-204ENST00000456013 NEUROD1Q13562 356 aa26.69■■□□□ 1.86
PTPN6-204ENST00000456013 BAZ1BQ9UIG0 1483 aaKnown RBP26.66■■□□□ 1.86
PTPN6-204ENST00000456013 CLIP1P30622 1438 aa26.65■■□□□ 1.86
PTPN6-204ENST00000456013 CENPBP07199 599 aaPredicted RBP26.62■■□□□ 1.85
PTPN6-204ENST00000456013 VPS8Q8N3P4 1428 aa26.61■■□□□ 1.85
PTPN6-204ENST00000456013 ZNF316A6NFI3 1004 aaPredicted RBP26.6■■□□□ 1.85
PTPN6-204ENST00000456013 RAPGEF2Q9Y4G8 1499 aa26.54■■□□□ 1.84
PTPN6-204ENST00000456013 TOP2BQ02880 1626 aa26.53■■□□□ 1.84
PTPN6-204ENST00000456013 HNRNPUL2Q1KMD3 747 aaKnown RBP26.46■■□□□ 1.83
PTPN6-204ENST00000456013 BIVM-ERCC5R4GMW8 1640 aa26.46■■□□□ 1.83
PTPN6-204ENST00000456013 GTF3C3Q9Y5Q9 886 aa26.44■■□□□ 1.82
PTPN6-204ENST00000456013 APLP2Q06481 763 aa26.42■■□□□ 1.82
PTPN6-204ENST00000456013 ERICH3Q5RHP9 1530 aa26.37■■□□□ 1.81
PTPN6-204ENST00000456013 PRXQ9BXM0 1461 aa26.3■■□□□ 1.8
PTPN6-204ENST00000456013 HMGXB3Q12766 1538 aa26.23■■□□□ 1.79
PTPN6-204ENST00000456013 ARAP1Q96P48 1450 aa26.22■■□□□ 1.79
PTPN6-204ENST00000456013 RANGAP1P46060 587 aaPredicted RBP26.22■■□□□ 1.79
PTPN6-204ENST00000456013 MIER1Q8N108 512 aa26.2■■□□□ 1.78
PTPN6-204ENST00000456013 CLSPNQ9HAW4 1339 aa26.19■■□□□ 1.78
PTPN6-204ENST00000456013 NCAPD3P42695 1498 aa26.18■■□□□ 1.78
PTPN6-204ENST00000456013 CUX1P39880 1505 aa26.16■■□□□ 1.78
PTPN6-204ENST00000456013 YTHDC1Q96MU7 727 aaKnown RBP26.11■■□□□ 1.77
PTPN6-204ENST00000456013 KIF27Q86VH2 1401 aa26.1■■□□□ 1.77
PTPN6-204ENST00000456013 DHX57Q6P158 1386 aaKnown RBP26.09■■□□□ 1.77
PTPN6-204ENST00000456013 RRBP1Q9P2E9 1410 aaKnown RBP26.05■■□□□ 1.76
PTPN6-204ENST00000456013 KANK4Q5T7N3 995 aaPredicted RBP26.04■■□□□ 1.76
PTPN6-204ENST00000456013 CFTRP13569 1480 aa26.03■■□□□ 1.76
PTPN6-204ENST00000456013 PRDM2Q13029 1718 aa25.97■■□□□ 1.75
PTPN6-204ENST00000456013 CUX2O14529 1486 aa25.97■■□□□ 1.75
PTPN6-204ENST00000456013 ARHGAP35Q9NRY4 1499 aa25.95■■□□□ 1.75
PTPN6-204ENST00000456013 CCNB3Q8WWL7 1395 aa25.88■■□□□ 1.73
PTPN6-204ENST00000456013 MAP3K1Q13233 1512 aa25.8■■□□□ 1.72
PTPN6-204ENST00000456013 IGF1RP08069 1367 aa25.77■■□□□ 1.72
PTPN6-204ENST00000456013 TIAM1Q13009 1591 aa25.76■■□□□ 1.71
PTPN6-204ENST00000456013 CARMIL1Q5VZK9 1371 aa25.67■■□□□ 1.7
PTPN6-204ENST00000456013 CADPSQ9ULU8 1353 aa25.66■■□□□ 1.7
PTPN6-204ENST00000456013 RAB3GAP2Q9H2M9 1393 aa25.66■■□□□ 1.7
PTPN6-204ENST00000456013 MYT1Q01538 1121 aa25.65■■□□□ 1.7
PTPN6-204ENST00000456013 FGD5Q6ZNL6 1462 aa25.64■■□□□ 1.7
PTPN6-204ENST00000456013 MAPKBP1O60336 1514 aa25.64■■□□□ 1.69
PTPN6-204ENST00000456013 LRRC9Q6ZRR7 1453 aa25.63■■□□□ 1.69
PTPN6-204ENST00000456013 ITGAEP38570 1179 aa25.62■■□□□ 1.69
PTPN6-204ENST00000456013 CFAP43Q8NDM7 1665 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms