RNA–Protein interactions for RNA: ENST00000452716.5

LINC01828-203, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 5 BASIC

Gene LINC01828, Length 3,250 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-203ENST00000452716 AEBP2Q6ZN18 517 aaPredicted RBP12.1□□□□□ -0.47
LINC01828-203ENST00000452716 CHIC1Q5VXU3 224 aa12.06□□□□□ -0.48
LINC01828-203ENST00000452716 PHF23Q9BUL5 403 aaPredicted RBP10.68□□□□□ -0.7
LINC01828-203ENST00000452716 SENP3Q9H4L4 574 aaPredicted RBP10.18□□□□□ -0.78
LINC01828-203ENST00000452716 PLPPR3Q6T4P5 718 aa9.95□□□□□ -0.82
LINC01828-203ENST00000452716 FOXD1Q16676 465 aa9.44□□□□□ -0.9
LINC01828-203ENST00000452716 ADRA2BP18089 450 aa9.39□□□□□ -0.91
LINC01828-203ENST00000452716 PPP6R1Q9UPN7 881 aa9.36□□□□□ -0.91
LINC01828-203ENST00000452716 PIAS4Q8N2W9 510 aaPredicted RBP9.02□□□□□ -0.96
LINC01828-203ENST00000452716 KCNA4P22459 653 aa9.02□□□□□ -0.97
LINC01828-203ENST00000452716 EHMT2Q96KQ7 1210 aa8.83□□□□□ -1
LINC01828-203ENST00000452716 PPP4R3CPQ6ZMV5 832 aa8.82□□□□□ -1
LINC01828-203ENST00000452716 NCBP3Q53F19 620 aaKnown RBP8.65□□□□□ -1.03
LINC01828-203ENST00000452716 SLC4A1APQ9BWU0 796 aaKnown RBP8.62□□□□□ -1.03
LINC01828-203ENST00000452716 NPM3O75607 178 aaKnown RBP8.56□□□□□ -1.04
LINC01828-203ENST00000452716 MSH5O43196 834 aa8.54□□□□□ -1.04
LINC01828-203ENST00000452716 SCAF1Q9H7N4 1312 aaKnown RBP8.5□□□□□ -1.05
LINC01828-203ENST00000452716 CSRNP3Q8WYN3 585 aa8.48□□□□□ -1.05
LINC01828-203ENST00000452716 CNKSR2Q8WXI2 1034 aa8.47□□□□□ -1.05
LINC01828-203ENST00000452716 MAPK8IP2Q13387 824 aaPredicted RBP8.43□□□□□ -1.06
LINC01828-203ENST00000452716 SLC24A1O60721 1099 aa8.41□□□□□ -1.06
LINC01828-203ENST00000452716 ZBTB22O15209 634 aa8.29□□□□□ -1.08
LINC01828-203ENST00000452716 RNF216Q9NWF9 866 aaPredicted RBP8.22□□□□□ -1.09
LINC01828-203ENST00000452716 FOXD4L1Q9NU39 408 aa8.16□□□□□ -1.1
LINC01828-203ENST00000452716 DMRT2Q9Y5R5 561 aa8.16□□□□□ -1.1
LINC01828-203ENST00000452716 RTN4Q9NQC3 1192 aaKnown RBP8.12□□□□□ -1.11
LINC01828-203ENST00000452716 DNAJC5BQ9UF47 199 aa8.09□□□□□ -1.11
LINC01828-203ENST00000452716 HOXD11P31277 338 aaPredicted RBP8.09□□□□□ -1.11
LINC01828-203ENST00000452716 SLC4A2P04920 1241 aa8□□□□□ -1.13
LINC01828-203ENST00000452716 DCAF8L1A6NGE4 600 aa7.95□□□□□ -1.14
LINC01828-203ENST00000452716 MYCNP04198 464 aaPredicted RBP7.88□□□□□ -1.15
LINC01828-203ENST00000452716 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.81□□□□□ -1.16
LINC01828-203ENST00000452716 ATXN8OSP0DMR3 200 aa7.77□□□□□ -1.17
LINC01828-203ENST00000452716 AMER1Q5JTC6 1135 aaPredicted RBP7.76□□□□□ -1.17
LINC01828-203ENST00000452716 ATF5Q9Y2D1 282 aaPredicted RBP7.7□□□□□ -1.18
LINC01828-203ENST00000452716 FKBP8Q14318 412 aa7.69□□□□□ -1.18
LINC01828-203ENST00000452716 U3KPZ7 1027 aaPredicted RBP7.68□□□□□ -1.18
LINC01828-203ENST00000452716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.65□□□□□ -1.19
LINC01828-203ENST00000452716 HNRNPUL2Q1KMD3 747 aaKnown RBP7.65□□□□□ -1.19
LINC01828-203ENST00000452716 SAMD1Q6SPF0 538 aaPredicted RBP7.65□□□□□ -1.19
LINC01828-203ENST00000452716 PRKCSHP14314 528 aaPredicted RBP7.6□□□□□ -1.19
LINC01828-203ENST00000452716 ZNF219Q9P2Y4 722 aaPredicted RBP7.51□□□□□ -1.21
LINC01828-203ENST00000452716 APLP2Q06481 763 aa7.46□□□□□ -1.21
LINC01828-203ENST00000452716 TRHP20396 242 aaPredicted RBP7.45□□□□□ -1.22
LINC01828-203ENST00000452716 SPINK5Q9NQ38 1064 aaPredicted RBP7.43□□□□□ -1.22
LINC01828-203ENST00000452716 CAPN15O75808 1086 aa7.39□□□□□ -1.23
LINC01828-203ENST00000452716 NISCHQ9Y2I1 1504 aa7.37□□□□□ -1.23
LINC01828-203ENST00000452716 RNF39Q9H2S5 420 aa7.37□□□□□ -1.23
LINC01828-203ENST00000452716 POLA2Q14181 598 aa7.36□□□□□ -1.23
LINC01828-203ENST00000452716 MKRN4PQ13434 485 aaPredicted RBP7.35□□□□□ -1.23
LINC01828-203ENST00000452716 POTEDQ86YR6 584 aa7.35□□□□□ -1.23
LINC01828-203ENST00000452716 SPDYE4A6NLX3 237 aa7.35□□□□□ -1.23
LINC01828-203ENST00000452716 FBLN2P98095 1184 aa7.32□□□□□ -1.24
LINC01828-203ENST00000452716 ABCB7O75027 752 aa7.3□□□□□ -1.24
LINC01828-203ENST00000452716 TAOK2Q9UL54 1235 aa7.28□□□□□ -1.24
LINC01828-203ENST00000452716 C1QBPQ07021 282 aaKnown RBP7.27□□□□□ -1.25
LINC01828-203ENST00000452716 PLCB2Q00722 1185 aa7.26□□□□□ -1.25
LINC01828-203ENST00000452716 FBXO3Q9UK99 471 aa7.25□□□□□ -1.25
LINC01828-203ENST00000452716 TIMELESSQ9UNS1 1208 aa7.23□□□□□ -1.25
LINC01828-203ENST00000452716 VASPP50552 380 aaPredicted RBP7.19□□□□□ -1.26
LINC01828-203ENST00000452716 PROM2Q8N271 834 aa7.18□□□□□ -1.26
LINC01828-203ENST00000452716 TPRNQ4KMQ1 711 aa7.17□□□□□ -1.26
LINC01828-203ENST00000452716 ZBTB12Q9Y330 459 aaPredicted RBP7.17□□□□□ -1.26
LINC01828-203ENST00000452716 HAP1P54257 671 aaPredicted RBP7.15□□□□□ -1.26
LINC01828-203ENST00000452716 DSG3P32926 999 aa7.13□□□□□ -1.27
LINC01828-203ENST00000452716 IFNLR1Q8IU57 520 aaPredicted RBP7.12□□□□□ -1.27
LINC01828-203ENST00000452716 BCANQ96GW7 911 aa7.12□□□□□ -1.27
LINC01828-203ENST00000452716 DAXXQ9UER7 740 aaPredicted RBP7.12□□□□□ -1.27
LINC01828-203ENST00000452716 OSCARQ8IYS5 282 aa7.12□□□□□ -1.27
LINC01828-203ENST00000452716 ZNF692Q9BU19 519 aaPredicted RBP7.1□□□□□ -1.27
LINC01828-203ENST00000452716 KDM2AQ9Y2K7 1162 aa7.1□□□□□ -1.27
LINC01828-203ENST00000452716 TULP1O00294 542 aaPredicted RBP7.09□□□□□ -1.27
LINC01828-203ENST00000452716 DCAF8L2P0C7V8 631 aa7.09□□□□□ -1.27
LINC01828-203ENST00000452716 KLHL34Q8N239 644 aa7.04□□□□□ -1.28
LINC01828-203ENST00000452716 SPDYE2BA6NHP3 402 aa7.03□□□□□ -1.28
LINC01828-203ENST00000452716 SPDYE6P0CI01 402 aa7.03□□□□□ -1.28
LINC01828-203ENST00000452716 SPDYE2Q495Y8 402 aa7.03□□□□□ -1.28
LINC01828-203ENST00000452716 PABPN1Q86U42 306 aaKnown RBP eCLIP7.03□□□□□ -1.28
LINC01828-203ENST00000452716 CACNB1Q02641 598 aaPredicted RBP7.01□□□□□ -1.29
LINC01828-203ENST00000452716 PLCD3Q8N3E9 789 aa7□□□□□ -1.29
LINC01828-203ENST00000452716 SSUH2Q9Y2M2 353 aa7□□□□□ -1.29
LINC01828-203ENST00000452716 PKD2Q13563 968 aa6.99□□□□□ -1.29
LINC01828-203ENST00000452716 MIER1Q8N108 512 aa6.97□□□□□ -1.29
LINC01828-203ENST00000452716 STAG3Q9UJ98 1225 aa6.95□□□□□ -1.3
LINC01828-203ENST00000452716 SPOCK2Q92563 424 aa6.95□□□□□ -1.3
LINC01828-203ENST00000452716 VSIG10Q8N0Z9 540 aa6.93□□□□□ -1.3
LINC01828-203ENST00000452716 ECM2O94769 699 aaPredicted RBP6.91□□□□□ -1.3
LINC01828-203ENST00000452716 ARXQ96QS3 562 aa6.91□□□□□ -1.3
LINC01828-203ENST00000452716 GTF3C3Q9Y5Q9 886 aa6.88□□□□□ -1.31
LINC01828-203ENST00000452716 NPM1P06748 294 aaKnown RBP eCLIP6.88□□□□□ -1.31
LINC01828-203ENST00000452716 PLEKHG5O94827 1062 aa6.88□□□□□ -1.31
LINC01828-203ENST00000452716 CIZ1Q9ULV3 898 aaPredicted RBP6.87□□□□□ -1.31
LINC01828-203ENST00000452716 RGL2O15211 777 aa6.84□□□□□ -1.31
LINC01828-203ENST00000452716 ZBTB47Q9UFB7 747 aaPredicted RBP6.82□□□□□ -1.32
LINC01828-203ENST00000452716 CLEC11AQ9Y240 323 aa6.81□□□□□ -1.32
LINC01828-203ENST00000452716 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.8□□□□□ -1.32
LINC01828-203ENST00000452716 TSHZ2Q9NRE2 1034 aa6.8□□□□□ -1.32
LINC01828-203ENST00000452716 CFAP44Q96MT7 982 aa6.79□□□□□ -1.32
LINC01828-203ENST00000452716 PAXIP1Q6ZW49 1069 aaPredicted RBP6.79□□□□□ -1.32
LINC01828-203ENST00000452716 CHGAP10645 457 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms