RNA–Protein interactions for RNA: ENST00000448372.5

SENP1-201, Transcript of SUMO specific peptidase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SENP1, Length 4,679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP1-201ENST00000448372 DCAF8L2P0C7V8 631 aa12.79□□□□□ -0.36
SENP1-201ENST00000448372 SUPT5HO00267 1087 aaKnown RBP12.28□□□□□ -0.44
SENP1-201ENST00000448372 NISCHQ9Y2I1 1504 aa12.16□□□□□ -0.46
SENP1-201ENST00000448372 SHROOM4Q9ULL8 1493 aa12.08□□□□□ -0.48
SENP1-201ENST00000448372 EHMT2Q96KQ7 1210 aa11.95□□□□□ -0.5
SENP1-201ENST00000448372 FAM9AQ8IZU1 332 aaPredicted RBP11.61□□□□□ -0.55
SENP1-201ENST00000448372 PCGF6Q9BYE7 350 aa11.54□□□□□ -0.56
SENP1-201ENST00000448372 TTBK1Q5TCY1 1321 aaPredicted RBP11.53□□□□□ -0.56
SENP1-201ENST00000448372 APLP2Q06481 763 aa11.39□□□□□ -0.59
SENP1-201ENST00000448372 RANGAP1P46060 587 aaPredicted RBP11.34□□□□□ -0.59
SENP1-201ENST00000448372 TRIM41Q8WV44 630 aa11.27□□□□□ -0.61
SENP1-201ENST00000448372 PELP1Q8IZL8 1130 aaKnown RBP11.24□□□□□ -0.61
SENP1-201ENST00000448372 CCER1Q8TC90 406 aaPredicted RBP11.2□□□□□ -0.62
SENP1-201ENST00000448372 PPARGC1BQ86YN6 1023 aaKnown RBP11.18□□□□□ -0.62
SENP1-201ENST00000448372 UBTFP17480 764 aaKnown RBP11.12□□□□□ -0.63
SENP1-201ENST00000448372 ATP1B4Q9UN42 357 aaPredicted RBP11.11□□□□□ -0.63
SENP1-201ENST00000448372 ZEB1P37275 1124 aaPredicted RBP11.08□□□□□ -0.64
SENP1-201ENST00000448372 CENPBP07199 599 aaPredicted RBP11.07□□□□□ -0.64
SENP1-201ENST00000448372 YTHDC1Q96MU7 727 aaKnown RBP11.04□□□□□ -0.64
SENP1-201ENST00000448372 LOC105371045A0A1W2PR82 267 aa11.03□□□□□ -0.64
SENP1-201ENST00000448372 CHIC1Q5VXU3 224 aa10.94□□□□□ -0.66
SENP1-201ENST00000448372 TRIM26Q12899 539 aaPredicted RBP10.93□□□□□ -0.66
SENP1-201ENST00000448372 HRCP23327 699 aa10.92□□□□□ -0.66
SENP1-201ENST00000448372 ERICH6Q7L0X2 663 aa10.87□□□□□ -0.67
SENP1-201ENST00000448372 ITGAEP38570 1179 aa10.85□□□□□ -0.67
SENP1-201ENST00000448372 HNRNPUL2Q1KMD3 747 aaKnown RBP10.81□□□□□ -0.68
SENP1-201ENST00000448372 NEFLP07196 543 aa10.79□□□□□ -0.68
SENP1-201ENST00000448372 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.74□□□□□ -0.69
SENP1-201ENST00000448372 CNGB1Q14028 1251 aaPredicted RBP10.7□□□□□ -0.7
SENP1-201ENST00000448372 POLR3GLQ9BT43 218 aa10.69□□□□□ -0.7
SENP1-201ENST00000448372 DIEXFQ68CQ4 756 aaKnown RBP10.59□□□□□ -0.71
SENP1-201ENST00000448372 PABPN1Q86U42 306 aaKnown RBP eCLIP10.56□□□□□ -0.72
SENP1-201ENST00000448372 MYT1LQ9UL68 1186 aa10.55□□□□□ -0.72
SENP1-201ENST00000448372 FAM50AQ14320 339 aaKnown RBP10.49□□□□□ -0.73
SENP1-201ENST00000448372 ABCC9O60706 1549 aa10.48□□□□□ -0.73
SENP1-201ENST00000448372 NEUROD1Q13562 356 aa10.47□□□□□ -0.73
SENP1-201ENST00000448372 MYT1Q01538 1121 aa10.46□□□□□ -0.74
SENP1-201ENST00000448372 GTF3C3Q9Y5Q9 886 aa10.43□□□□□ -0.74
SENP1-201ENST00000448372 BCANQ96GW7 911 aa10.43□□□□□ -0.74
SENP1-201ENST00000448372 DAXXQ9UER7 740 aaPredicted RBP10.41□□□□□ -0.74
SENP1-201ENST00000448372 TRIM52Q96A61 297 aa10.4□□□□□ -0.74
SENP1-201ENST00000448372 SLC4A1APQ9BWU0 796 aaKnown RBP10.38□□□□□ -0.75
SENP1-201ENST00000448372 ZNF326Q5BKZ1 582 aaKnown RBP10.34□□□□□ -0.75
SENP1-201ENST00000448372 P3H3Q8IVL6 736 aa10.33□□□□□ -0.76
SENP1-201ENST00000448372 ZNF316A6NFI3 1004 aaPredicted RBP10.32□□□□□ -0.76
SENP1-201ENST00000448372 ARID3CA6NKF2 412 aa10.31□□□□□ -0.76
SENP1-201ENST00000448372 CSRNP3Q8WYN3 585 aa10.3□□□□□ -0.76
SENP1-201ENST00000448372 CLSPNQ9HAW4 1339 aa10.28□□□□□ -0.76
SENP1-201ENST00000448372 ANP32CO43423 234 aa10.26□□□□□ -0.77
SENP1-201ENST00000448372 FBLN2P98095 1184 aa10.26□□□□□ -0.77
SENP1-201ENST00000448372 ACIN1Q9UKV3 1341 aaKnown RBP10.25□□□□□ -0.77
SENP1-201ENST00000448372 RTL5Q5HYW3 569 aaPredicted RBP10.22□□□□□ -0.77
SENP1-201ENST00000448372 CDK11AQ9UQ88 783 aaPredicted RBP10.15□□□□□ -0.78
SENP1-201ENST00000448372 BCL11AQ9H165 835 aa10.15□□□□□ -0.79
SENP1-201ENST00000448372 ZNF777Q9ULD5 760 aaPredicted RBP10.14□□□□□ -0.79
SENP1-201ENST00000448372 DDX10Q13206 875 aaKnown RBP10.11□□□□□ -0.79
SENP1-201ENST00000448372 FKBP8Q14318 412 aa10.09□□□□□ -0.79
SENP1-201ENST00000448372 SCRIBQ14160 1630 aa10.08□□□□□ -0.8
SENP1-201ENST00000448372 DCAF1Q9Y4B6 1507 aa10.06□□□□□ -0.8
SENP1-201ENST00000448372 HIRIP3Q9BW71 556 aaPredicted RBP10.06□□□□□ -0.8
SENP1-201ENST00000448372 ZCCHC6Q5VYS8 1495 aaKnown RBP10.05□□□□□ -0.8
SENP1-201ENST00000448372 MYO15BQ96JP2 1530 aa10.05□□□□□ -0.8
SENP1-201ENST00000448372 CHIC2Q9UKJ5 165 aa10.05□□□□□ -0.8
SENP1-201ENST00000448372 HNRNPUQ00839 825 aaKnown RBP eCLIP10.04□□□□□ -0.8
SENP1-201ENST00000448372 NPM2Q86SE8 214 aaKnown RBP10.04□□□□□ -0.8
SENP1-201ENST00000448372 SALL2Q9Y467 1007 aaPredicted RBP10.04□□□□□ -0.8
SENP1-201ENST00000448372 FAM9BQ8IZU0 186 aa10.03□□□□□ -0.8
SENP1-201ENST00000448372 CANXP27824 592 aaKnown RBP10.03□□□□□ -0.8
SENP1-201ENST00000448372 MIER1Q8N108 512 aa10.03□□□□□ -0.8
SENP1-201ENST00000448372 TONSLQ96HA7 1378 aa10.02□□□□□ -0.8
SENP1-201ENST00000448372 SCAF1Q9H7N4 1312 aaKnown RBP10.02□□□□□ -0.81
SENP1-201ENST00000448372 SLC24A1O60721 1099 aa10.01□□□□□ -0.81
SENP1-201ENST00000448372 ZBTB47Q9UFB7 747 aaPredicted RBP9.97□□□□□ -0.81
SENP1-201ENST00000448372 IRX6P78412 446 aaPredicted RBP9.96□□□□□ -0.82
SENP1-201ENST00000448372 ANP32AP39687 249 aaKnown RBP9.96□□□□□ -0.82
SENP1-201ENST00000448372 CHGAP10645 457 aaKnown RBP9.95□□□□□ -0.82
SENP1-201ENST00000448372 SENP3-EIF4A1A0A087X0R7 540 aa9.93□□□□□ -0.82
SENP1-201ENST00000448372 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.93□□□□□ -0.82
SENP1-201ENST00000448372 KDM2AQ9Y2K7 1162 aa9.92□□□□□ -0.82
SENP1-201ENST00000448372 CLIP1P30622 1438 aa9.91□□□□□ -0.82
SENP1-201ENST00000448372 NEFMP07197 916 aa9.9□□□□□ -0.82
SENP1-201ENST00000448372 MRS2Q9HD23 443 aa9.9□□□□□ -0.82
SENP1-201ENST00000448372 TMC1Q8TDI8 760 aa9.9□□□□□ -0.83
SENP1-201ENST00000448372 RRP7BPQ9NSQ0 103 aa9.89□□□□□ -0.83
SENP1-201ENST00000448372 RSF1Q96T23 1441 aaPredicted RBP9.88□□□□□ -0.83
SENP1-201ENST00000448372 CCDC136Q96JN2 1154 aa9.87□□□□□ -0.83
SENP1-201ENST00000448372 PLPPR3Q6T4P5 718 aa9.87□□□□□ -0.83
SENP1-201ENST00000448372 MTUS2Q5JR59 1369 aa9.87□□□□□ -0.83
SENP1-201ENST00000448372 NBR1Q14596 966 aa9.86□□□□□ -0.83
SENP1-201ENST00000448372 SENP3Q9H4L4 574 aaPredicted RBP9.86□□□□□ -0.83
SENP1-201ENST00000448372 CEP162Q5TB80 1403 aa9.85□□□□□ -0.83
SENP1-201ENST00000448372 TSPY4P0CV99 314 aa9.83□□□□□ -0.84
SENP1-201ENST00000448372 TSPY10P0CW01 314 aa9.83□□□□□ -0.84
SENP1-201ENST00000448372 STAG3Q9UJ98 1225 aa9.82□□□□□ -0.84
SENP1-201ENST00000448372 EIF4G2P78344 907 aaKnown RBP eCLIP9.8□□□□□ -0.84
SENP1-201ENST00000448372 EIF5BO60841 1220 aaKnown RBP9.8□□□□□ -0.84
SENP1-201ENST00000448372 SIN3AQ96ST3 1273 aa9.8□□□□□ -0.84
SENP1-201ENST00000448372 ARXQ96QS3 562 aa9.79□□□□□ -0.84
SENP1-201ENST00000448372 HSP90AA1P07900 732 aaKnown RBP9.79□□□□□ -0.84
SENP1-201ENST00000448372 RGL3Q3MIN7 710 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms