RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 DCAF8L2P0C7V8 631 aa18.41■□□□□ 0.54
SHPRH-206ENST00000438092 EHMT2Q96KQ7 1210 aa17.18■□□□□ 0.34
SHPRH-206ENST00000438092 SUPT5HO00267 1087 aaKnown RBP17.16■□□□□ 0.34
SHPRH-206ENST00000438092 SHROOM4Q9ULL8 1493 aa16.9■□□□□ 0.3
SHPRH-206ENST00000438092 TTBK1Q5TCY1 1321 aaPredicted RBP16.53■□□□□ 0.24
SHPRH-206ENST00000438092 FAM9AQ8IZU1 332 aaPredicted RBP16.36■□□□□ 0.21
SHPRH-206ENST00000438092 APLP2Q06481 763 aa16.35■□□□□ 0.21
SHPRH-206ENST00000438092 RANGAP1P46060 587 aaPredicted RBP16.35■□□□□ 0.21
SHPRH-206ENST00000438092 NISCHQ9Y2I1 1504 aa16.25■□□□□ 0.19
SHPRH-206ENST00000438092 PELP1Q8IZL8 1130 aaKnown RBP16.17■□□□□ 0.18
SHPRH-206ENST00000438092 ATP1B4Q9UN42 357 aaPredicted RBP16.16■□□□□ 0.18
SHPRH-206ENST00000438092 PCGF6Q9BYE7 350 aa16.03■□□□□ 0.16
SHPRH-206ENST00000438092 ERICH6Q7L0X2 663 aa15.8■□□□□ 0.12
SHPRH-206ENST00000438092 CCER1Q8TC90 406 aaPredicted RBP15.74■□□□□ 0.11
SHPRH-206ENST00000438092 UBTFP17480 764 aaKnown RBP15.73■□□□□ 0.11
SHPRH-206ENST00000438092 PPARGC1BQ86YN6 1023 aaKnown RBP15.71■□□□□ 0.11
SHPRH-206ENST00000438092 TRIM41Q8WV44 630 aa15.71■□□□□ 0.11
SHPRH-206ENST00000438092 YTHDC1Q96MU7 727 aaKnown RBP15.64■□□□□ 0.09
SHPRH-206ENST00000438092 MYT1LQ9UL68 1186 aa15.64■□□□□ 0.09
SHPRH-206ENST00000438092 CHIC1Q5VXU3 224 aa15.59■□□□□ 0.09
SHPRH-206ENST00000438092 POLR3GLQ9BT43 218 aa15.52■□□□□ 0.08
SHPRH-206ENST00000438092 CENPBP07199 599 aaPredicted RBP15.52■□□□□ 0.07
SHPRH-206ENST00000438092 CNGB1Q14028 1251 aaPredicted RBP15.51■□□□□ 0.07
SHPRH-206ENST00000438092 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.49■□□□□ 0.07
SHPRH-206ENST00000438092 HNRNPUL2Q1KMD3 747 aaKnown RBP15.49■□□□□ 0.07
SHPRH-206ENST00000438092 ITGAEP38570 1179 aa15.48■□□□□ 0.07
SHPRH-206ENST00000438092 NEFLP07196 543 aa15.41■□□□□ 0.06
SHPRH-206ENST00000438092 SLC4A1APQ9BWU0 796 aaKnown RBP15.31■□□□□ 0.04
SHPRH-206ENST00000438092 ZEB1P37275 1124 aaPredicted RBP15.31■□□□□ 0.04
SHPRH-206ENST00000438092 MYT1Q01538 1121 aa15.27■□□□□ 0.03
SHPRH-206ENST00000438092 DAXXQ9UER7 740 aaPredicted RBP15.13■□□□□ 0.01
SHPRH-206ENST00000438092 LOC105371045A0A1W2PR82 267 aa15.06■□□□□ 0
SHPRH-206ENST00000438092 TRIM26Q12899 539 aaPredicted RBP14.95□□□□□ -0.02
SHPRH-206ENST00000438092 FAM50AQ14320 339 aaKnown RBP14.92□□□□□ -0.02
SHPRH-206ENST00000438092 BCL11AQ9H165 835 aa14.91□□□□□ -0.02
SHPRH-206ENST00000438092 CLSPNQ9HAW4 1339 aa14.9□□□□□ -0.02
SHPRH-206ENST00000438092 PABPN1Q86U42 306 aaKnown RBP eCLIP14.88□□□□□ -0.03
SHPRH-206ENST00000438092 SLC24A1O60721 1099 aa14.88□□□□□ -0.03
SHPRH-206ENST00000438092 TRIM52Q96A61 297 aa14.87□□□□□ -0.03
SHPRH-206ENST00000438092 FBLN2P98095 1184 aa14.86□□□□□ -0.03
SHPRH-206ENST00000438092 HRCP23327 699 aa14.84□□□□□ -0.03
SHPRH-206ENST00000438092 NEUROD1Q13562 356 aa14.83□□□□□ -0.04
SHPRH-206ENST00000438092 ZNF326Q5BKZ1 582 aaKnown RBP14.82□□□□□ -0.04
SHPRH-206ENST00000438092 ZNF316A6NFI3 1004 aaPredicted RBP14.78□□□□□ -0.04
SHPRH-206ENST00000438092 BCANQ96GW7 911 aa14.78□□□□□ -0.04
SHPRH-206ENST00000438092 ARID3CA6NKF2 412 aa14.77□□□□□ -0.05
SHPRH-206ENST00000438092 PLPPR3Q6T4P5 718 aa14.76□□□□□ -0.05
SHPRH-206ENST00000438092 ABCC9O60706 1549 aa14.67□□□□□ -0.06
SHPRH-206ENST00000438092 P3H3Q8IVL6 736 aa14.62□□□□□ -0.07
SHPRH-206ENST00000438092 DIEXFQ68CQ4 756 aaKnown RBP14.6□□□□□ -0.07
SHPRH-206ENST00000438092 RTL5Q5HYW3 569 aaPredicted RBP14.59□□□□□ -0.07
SHPRH-206ENST00000438092 ZBTB47Q9UFB7 747 aaPredicted RBP14.57□□□□□ -0.08
SHPRH-206ENST00000438092 ZNF777Q9ULD5 760 aaPredicted RBP14.52□□□□□ -0.08
SHPRH-206ENST00000438092 CANXP27824 592 aaKnown RBP14.52□□□□□ -0.09
SHPRH-206ENST00000438092 ANP32CO43423 234 aa14.44□□□□□ -0.1
SHPRH-206ENST00000438092 CHGAP10645 457 aaKnown RBP14.43□□□□□ -0.1
SHPRH-206ENST00000438092 NEFMP07197 916 aa14.4□□□□□ -0.1
SHPRH-206ENST00000438092 SENP3Q9H4L4 574 aaPredicted RBP14.4□□□□□ -0.1
SHPRH-206ENST00000438092 ESF1Q9H501 851 aaKnown RBP14.39□□□□□ -0.11
SHPRH-206ENST00000438092 STAG3Q9UJ98 1225 aa14.37□□□□□ -0.11
SHPRH-206ENST00000438092 PLEKHG5O94827 1062 aa14.37□□□□□ -0.11
SHPRH-206ENST00000438092 SCAF1Q9H7N4 1312 aaKnown RBP14.32□□□□□ -0.12
SHPRH-206ENST00000438092 NPM2Q86SE8 214 aaKnown RBP14.32□□□□□ -0.12
SHPRH-206ENST00000438092 CDK11AQ9UQ88 783 aaPredicted RBP14.31□□□□□ -0.12
SHPRH-206ENST00000438092 A0A0G2JS52 829 aa14.31□□□□□ -0.12
SHPRH-206ENST00000438092 GTF3C3Q9Y5Q9 886 aa14.3□□□□□ -0.12
SHPRH-206ENST00000438092 SALL2Q9Y467 1007 aaPredicted RBP14.29□□□□□ -0.12
SHPRH-206ENST00000438092 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.24□□□□□ -0.131e-6■■□□□ 11.8
SHPRH-206ENST00000438092 ZBTB7CA1YPR0 619 aa14.2□□□□□ -0.14
SHPRH-206ENST00000438092 NPM1P06748 294 aaKnown RBP eCLIP14.16□□□□□ -0.14
SHPRH-206ENST00000438092 CHIC2Q9UKJ5 165 aa14.15□□□□□ -0.14
SHPRH-206ENST00000438092 HSP90AA1P07900 732 aaKnown RBP14.12□□□□□ -0.15
SHPRH-206ENST00000438092 FAM9BQ8IZU0 186 aa14.12□□□□□ -0.15
SHPRH-206ENST00000438092 KDM2AQ9Y2K7 1162 aa14.1□□□□□ -0.15
SHPRH-206ENST00000438092 ANP32AP39687 249 aaKnown RBP14.08□□□□□ -0.16
SHPRH-206ENST00000438092 C14orf37Q86TY3 774 aa14.08□□□□□ -0.16
SHPRH-206ENST00000438092 ARXQ96QS3 562 aa14.08□□□□□ -0.16
SHPRH-206ENST00000438092 CSRNP3Q8WYN3 585 aa14.05□□□□□ -0.16
SHPRH-206ENST00000438092 DDX10Q13206 875 aaKnown RBP14.03□□□□□ -0.16
SHPRH-206ENST00000438092 FKBP8Q14318 412 aa14.03□□□□□ -0.16
SHPRH-206ENST00000438092 HNRNPUQ00839 825 aaKnown RBP eCLIP14.02□□□□□ -0.16
SHPRH-206ENST00000438092 TONSLQ96HA7 1378 aa14.02□□□□□ -0.17
SHPRH-206ENST00000438092 SCRIBQ14160 1630 aa14.01□□□□□ -0.17
SHPRH-206ENST00000438092 SENP3-EIF4A1A0A087X0R7 540 aa14.01□□□□□ -0.17
SHPRH-206ENST00000438092 HIRIP3Q9BW71 556 aaPredicted RBP14.01□□□□□ -0.17
SHPRH-206ENST00000438092 KCNH8Q96L42 1107 aa13.97□□□□□ -0.17
SHPRH-206ENST00000438092 EIF5BO60841 1220 aaKnown RBP13.95□□□□□ -0.18
SHPRH-206ENST00000438092 TMC1Q8TDI8 760 aa13.94□□□□□ -0.18
SHPRH-206ENST00000438092 IRX6P78412 446 aaPredicted RBP13.94□□□□□ -0.18
SHPRH-206ENST00000438092 ANP32BQ92688 251 aaKnown RBP13.94□□□□□ -0.18
SHPRH-206ENST00000438092 WDR43Q15061 677 aaKnown RBP eCLIP13.93□□□□□ -0.18
SHPRH-206ENST00000438092 UPF2Q9HAU5 1272 aaKnown RBP13.93□□□□□ -0.18
SHPRH-206ENST00000438092 TULP1O00294 542 aaPredicted RBP13.92□□□□□ -0.18
SHPRH-206ENST00000438092 ARID4BQ4LE39 1312 aaPredicted RBP13.92□□□□□ -0.18
SHPRH-206ENST00000438092 HAP1P54257 671 aaPredicted RBP13.91□□□□□ -0.18
SHPRH-206ENST00000438092 NBR1Q14596 966 aa13.91□□□□□ -0.18
SHPRH-206ENST00000438092 CHMP7Q8WUX9 453 aaPredicted RBP13.91□□□□□ -0.18
SHPRH-206ENST00000438092 PPP1R15AO75807 674 aaPredicted RBP13.9□□□□□ -0.18
SHPRH-206ENST00000438092 TPRNQ4KMQ1 711 aa13.87□□□□□ -0.19
SHPRH-206ENST00000438092 ACIN1Q9UKV3 1341 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms