RNA–Protein interactions for RNA: ENST00000435367.2

AC025428.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC025428.2, Length 2,672 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025428.2-201ENST00000435367 AEBP2Q6ZN18 517 aaPredicted RBP17.07■□□□□ 0.32
AC025428.2-201ENST00000435367 CHIC1Q5VXU3 224 aa16.48■□□□□ 0.23
AC025428.2-201ENST00000435367 SENP3Q9H4L4 574 aaPredicted RBP14.8□□□□□ -0.04
AC025428.2-201ENST00000435367 PHF23Q9BUL5 403 aaPredicted RBP14.79□□□□□ -0.04
AC025428.2-201ENST00000435367 EHMT2Q96KQ7 1210 aa13.95□□□□□ -0.18
AC025428.2-201ENST00000435367 PLPPR3Q6T4P5 718 aa13.81□□□□□ -0.2
AC025428.2-201ENST00000435367 FOXD1Q16676 465 aa13.64□□□□□ -0.23
AC025428.2-201ENST00000435367 KCNA4P22459 653 aa13.46□□□□□ -0.26
AC025428.2-201ENST00000435367 SLC24A1O60721 1099 aa13.27□□□□□ -0.28
AC025428.2-201ENST00000435367 CSRNP3Q8WYN3 585 aa13.21□□□□□ -0.3
AC025428.2-201ENST00000435367 ADRA2BP18089 450 aa13.18□□□□□ -0.3
AC025428.2-201ENST00000435367 MSH5O43196 834 aa12.98□□□□□ -0.33
AC025428.2-201ENST00000435367 SLC4A1APQ9BWU0 796 aaKnown RBP12.88□□□□□ -0.35
AC025428.2-201ENST00000435367 RTN4Q9NQC3 1192 aaKnown RBP12.81□□□□□ -0.36
AC025428.2-201ENST00000435367 PIAS4Q8N2W9 510 aaPredicted RBP12.78□□□□□ -0.36
AC025428.2-201ENST00000435367 PPP6R1Q9UPN7 881 aa12.75□□□□□ -0.37
AC025428.2-201ENST00000435367 AMER1Q5JTC6 1135 aaPredicted RBP12.53□□□□□ -0.4
AC025428.2-201ENST00000435367 POTEDQ86YR6 584 aa12.5□□□□□ -0.41
AC025428.2-201ENST00000435367 ZBTB22O15209 634 aa12.48□□□□□ -0.41
AC025428.2-201ENST00000435367 PPP4R3CPQ6ZMV5 832 aa12.38□□□□□ -0.43
AC025428.2-201ENST00000435367 NPM3O75607 178 aaKnown RBP12.24□□□□□ -0.45
AC025428.2-201ENST00000435367 NCBP3Q53F19 620 aaKnown RBP12.19□□□□□ -0.46
AC025428.2-201ENST00000435367 FOXD4L1Q9NU39 408 aa11.91□□□□□ -0.5
AC025428.2-201ENST00000435367 SCAF1Q9H7N4 1312 aaKnown RBP11.87□□□□□ -0.51
AC025428.2-201ENST00000435367 FKBP8Q14318 412 aa11.85□□□□□ -0.51
AC025428.2-201ENST00000435367 PRKCSHP14314 528 aaPredicted RBP11.82□□□□□ -0.52
AC025428.2-201ENST00000435367 CNKSR2Q8WXI2 1034 aa11.71□□□□□ -0.54
AC025428.2-201ENST00000435367 DMRT2Q9Y5R5 561 aa11.7□□□□□ -0.54
AC025428.2-201ENST00000435367 PLCB2Q00722 1185 aa11.6□□□□□ -0.55
AC025428.2-201ENST00000435367 MAPK8IP2Q13387 824 aaPredicted RBP11.57□□□□□ -0.56
AC025428.2-201ENST00000435367 TAOK2Q9UL54 1235 aa11.53□□□□□ -0.56
AC025428.2-201ENST00000435367 HAP1P54257 671 aaPredicted RBP11.48□□□□□ -0.57
AC025428.2-201ENST00000435367 BCANQ96GW7 911 aa11.48□□□□□ -0.57
AC025428.2-201ENST00000435367 DNAJC5BQ9UF47 199 aa11.44□□□□□ -0.58
AC025428.2-201ENST00000435367 TPRNQ4KMQ1 711 aa11.37□□□□□ -0.59
AC025428.2-201ENST00000435367 SLC4A2P04920 1241 aa11.34□□□□□ -0.59
AC025428.2-201ENST00000435367 HOXD11P31277 338 aaPredicted RBP11.28□□□□□ -0.6
AC025428.2-201ENST00000435367 TIMELESSQ9UNS1 1208 aa11.26□□□□□ -0.61
AC025428.2-201ENST00000435367 ATXN8OSP0DMR3 200 aa11.24□□□□□ -0.61
AC025428.2-201ENST00000435367 RNF216Q9NWF9 866 aaPredicted RBP11.22□□□□□ -0.61
AC025428.2-201ENST00000435367 DAXXQ9UER7 740 aaPredicted RBP11.22□□□□□ -0.61
AC025428.2-201ENST00000435367 DCAF8L2P0C7V8 631 aa11.22□□□□□ -0.61
AC025428.2-201ENST00000435367 VSIG10Q8N0Z9 540 aa11.19□□□□□ -0.62
AC025428.2-201ENST00000435367 KDM2AQ9Y2K7 1162 aa11.17□□□□□ -0.62
AC025428.2-201ENST00000435367 NISCHQ9Y2I1 1504 aa11.16□□□□□ -0.62
AC025428.2-201ENST00000435367 MYCNP04198 464 aaPredicted RBP11.15□□□□□ -0.62
AC025428.2-201ENST00000435367 TULP1O00294 542 aaPredicted RBP11.15□□□□□ -0.62
AC025428.2-201ENST00000435367 DCAF8L1A6NGE4 600 aa11.13□□□□□ -0.63
AC025428.2-201ENST00000435367 FBLN2P98095 1184 aa11.12□□□□□ -0.63
AC025428.2-201ENST00000435367 ATF5Q9Y2D1 282 aaPredicted RBP11.04□□□□□ -0.64
AC025428.2-201ENST00000435367 CACNB1Q02641 598 aaPredicted RBP11.04□□□□□ -0.64
AC025428.2-201ENST00000435367 ARXQ96QS3 562 aa11□□□□□ -0.65
AC025428.2-201ENST00000435367 PKD2Q13563 968 aa10.95□□□□□ -0.66
AC025428.2-201ENST00000435367 RNF39Q9H2S5 420 aa10.95□□□□□ -0.66
AC025428.2-201ENST00000435367 GTF3C3Q9Y5Q9 886 aa10.92□□□□□ -0.66
AC025428.2-201ENST00000435367 IFNLR1Q8IU57 520 aaPredicted RBP10.91□□□□□ -0.66
AC025428.2-201ENST00000435367 FBXO3Q9UK99 471 aa10.9□□□□□ -0.66
AC025428.2-201ENST00000435367 C1QBPQ07021 282 aaKnown RBP10.9□□□□□ -0.67
AC025428.2-201ENST00000435367 PAXIP1Q6ZW49 1069 aaPredicted RBP10.89□□□□□ -0.67
AC025428.2-201ENST00000435367 VASPP50552 380 aaPredicted RBP10.88□□□□□ -0.67
AC025428.2-201ENST00000435367 CFAP44Q96MT7 982 aa10.88□□□□□ -0.67
AC025428.2-201ENST00000435367 NPM1P06748 294 aaKnown RBP eCLIP10.85□□□□□ -0.67
AC025428.2-201ENST00000435367 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.81□□□□□ -0.68
AC025428.2-201ENST00000435367 TSHZ2Q9NRE2 1034 aa10.8□□□□□ -0.68
AC025428.2-201ENST00000435367 BBXQ8WY36 941 aaPredicted RBP10.79□□□□□ -0.68
AC025428.2-201ENST00000435367 HOMEZQ8IX15 550 aa10.74□□□□□ -0.69
AC025428.2-201ENST00000435367 SPDYE4A6NLX3 237 aa10.73□□□□□ -0.69
AC025428.2-201ENST00000435367 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.73□□□□□ -0.69
AC025428.2-201ENST00000435367 TMEM132AQ24JP5 1023 aa10.7□□□□□ -0.7
AC025428.2-201ENST00000435367 NBR1Q14596 966 aa10.66□□□□□ -0.7
AC025428.2-201ENST00000435367 PROM2Q8N271 834 aa10.65□□□□□ -0.7
AC025428.2-201ENST00000435367 SPRYD3Q8NCJ5 442 aa10.63□□□□□ -0.71
AC025428.2-201ENST00000435367 ECM2O94769 699 aaPredicted RBP10.61□□□□□ -0.71
AC025428.2-201ENST00000435367 C14orf37Q86TY3 774 aa10.61□□□□□ -0.71
AC025428.2-201ENST00000435367 RGL2O15211 777 aa10.58□□□□□ -0.72
AC025428.2-201ENST00000435367 ERICH6Q7L0X2 663 aa10.56□□□□□ -0.72
AC025428.2-201ENST00000435367 MKRN4PQ13434 485 aaPredicted RBP10.55□□□□□ -0.72
AC025428.2-201ENST00000435367 ZNF219Q9P2Y4 722 aaPredicted RBP10.53□□□□□ -0.72
AC025428.2-201ENST00000435367 DNAJC5Q9H3Z4 198 aa10.51□□□□□ -0.73
AC025428.2-201ENST00000435367 SAMD1Q6SPF0 538 aaPredicted RBP10.51□□□□□ -0.73
AC025428.2-201ENST00000435367 APLP2Q06481 763 aa10.47□□□□□ -0.73
AC025428.2-201ENST00000435367 PODXL2Q9NZ53 605 aa10.46□□□□□ -0.73
AC025428.2-201ENST00000435367 U3KPZ7 1027 aaPredicted RBP10.45□□□□□ -0.74
AC025428.2-201ENST00000435367 SUPT5HO00267 1087 aaKnown RBP10.44□□□□□ -0.74
AC025428.2-201ENST00000435367 CHGAP10645 457 aaKnown RBP10.44□□□□□ -0.74
AC025428.2-201ENST00000435367 KLHL34Q8N239 644 aa10.43□□□□□ -0.74
AC025428.2-201ENST00000435367 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.43□□□□□ -0.74
AC025428.2-201ENST00000435367 HNRNPUL2Q1KMD3 747 aaKnown RBP10.43□□□□□ -0.74
AC025428.2-201ENST00000435367 SPOCK2Q92563 424 aa10.42□□□□□ -0.74
AC025428.2-201ENST00000435367 RANGAP1P46060 587 aaPredicted RBP10.33□□□□□ -0.76
AC025428.2-201ENST00000435367 CAPN15O75808 1086 aa10.3□□□□□ -0.76
AC025428.2-201ENST00000435367 UBTFP17480 764 aaKnown RBP10.26□□□□□ -0.77
AC025428.2-201ENST00000435367 DSG3P32926 999 aa10.22□□□□□ -0.77
AC025428.2-201ENST00000435367 BRPF1P55201 1214 aaPredicted RBP10.2□□□□□ -0.78
AC025428.2-201ENST00000435367 TRIM26Q12899 539 aaPredicted RBP10.2□□□□□ -0.78
AC025428.2-201ENST00000435367 NKX1-1Q15270 411 aaPredicted RBP10.2□□□□□ -0.78
AC025428.2-201ENST00000435367 SPINK5Q9NQ38 1064 aaPredicted RBP10.2□□□□□ -0.78
AC025428.2-201ENST00000435367 CIZ1Q9ULV3 898 aaPredicted RBP10.19□□□□□ -0.78
AC025428.2-201ENST00000435367 TRHP20396 242 aaPredicted RBP10.19□□□□□ -0.78
AC025428.2-201ENST00000435367 HS6ST3Q8IZP7 471 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms