RNA–Protein interactions for RNA: ENST00000434559.1

LINC01878-201, Transcript of long intergenic non-protein coding RNA 1878, humanhuman

TSL 3 BASIC

Gene LINC01878, Length 769 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01878-201ENST00000434559 AEBP2Q6ZN18 517 aaPredicted RBP22.68■■□□□ 1.22
LINC01878-201ENST00000434559 CHIC1Q5VXU3 224 aa22.55■■□□□ 1.2
LINC01878-201ENST00000434559 PHF23Q9BUL5 403 aaPredicted RBP19.87■□□□□ 0.77
LINC01878-201ENST00000434559 SENP3Q9H4L4 574 aaPredicted RBP19.52■□□□□ 0.72
LINC01878-201ENST00000434559 PLPPR3Q6T4P5 718 aa18.58■□□□□ 0.56
LINC01878-201ENST00000434559 FOXD1Q16676 465 aa18.2■□□□□ 0.5
LINC01878-201ENST00000434559 POTEDQ86YR6 584 aa17.64■□□□□ 0.41
LINC01878-201ENST00000434559 ADRA2BP18089 450 aa17.36■□□□□ 0.37
LINC01878-201ENST00000434559 PPP6R1Q9UPN7 881 aa17.33■□□□□ 0.36
LINC01878-201ENST00000434559 MSH5O43196 834 aa17.27■□□□□ 0.36
LINC01878-201ENST00000434559 PIAS4Q8N2W9 510 aaPredicted RBP17■□□□□ 0.31
LINC01878-201ENST00000434559 KCNA4P22459 653 aa16.72■□□□□ 0.27
LINC01878-201ENST00000434559 PPP4R3CPQ6ZMV5 832 aa16.43■□□□□ 0.22
LINC01878-201ENST00000434559 EHMT2Q96KQ7 1210 aa16.23■□□□□ 0.19
LINC01878-201ENST00000434559 NCBP3Q53F19 620 aaKnown RBP16.19■□□□□ 0.18
LINC01878-201ENST00000434559 SLC4A1APQ9BWU0 796 aaKnown RBP16.03■□□□□ 0.16
LINC01878-201ENST00000434559 NPM3O75607 178 aaKnown RBP15.93■□□□□ 0.14
LINC01878-201ENST00000434559 SCAF1Q9H7N4 1312 aaKnown RBP15.92■□□□□ 0.14
LINC01878-201ENST00000434559 CNKSR2Q8WXI2 1034 aa15.85■□□□□ 0.13
LINC01878-201ENST00000434559 CSRNP3Q8WYN3 585 aa15.79■□□□□ 0.12
LINC01878-201ENST00000434559 MAPK8IP2Q13387 824 aaPredicted RBP15.56■□□□□ 0.08
LINC01878-201ENST00000434559 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
LINC01878-201ENST00000434559 RNF216Q9NWF9 866 aaPredicted RBP15.4■□□□□ 0.06
LINC01878-201ENST00000434559 ZBTB22O15209 634 aa15.38■□□□□ 0.05
LINC01878-201ENST00000434559 DMRT2Q9Y5R5 561 aa15.36■□□□□ 0.05
LINC01878-201ENST00000434559 FOXD4L1Q9NU39 408 aa15.22■□□□□ 0.03
LINC01878-201ENST00000434559 CACNB1Q02641 598 aaPredicted RBP15.19■□□□□ 0.02
LINC01878-201ENST00000434559 HOXD11P31277 338 aaPredicted RBP15.18■□□□□ 0.02
LINC01878-201ENST00000434559 DCAF8L1A6NGE4 600 aa14.97□□□□□ -0.01
LINC01878-201ENST00000434559 SLC4A2P04920 1241 aa14.9□□□□□ -0.02
LINC01878-201ENST00000434559 MYCNP04198 464 aaPredicted RBP14.73□□□□□ -0.05
LINC01878-201ENST00000434559 ATXN8OSP0DMR3 200 aa14.66□□□□□ -0.06
LINC01878-201ENST00000434559 RNF39Q9H2S5 420 aa14.63□□□□□ -0.07
LINC01878-201ENST00000434559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.46□□□□□ -0.09
LINC01878-201ENST00000434559 C1QBPQ07021 282 aaKnown RBP14.43□□□□□ -0.1
LINC01878-201ENST00000434559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.35□□□□□ -0.11
LINC01878-201ENST00000434559 HNRNPUL2Q1KMD3 747 aaKnown RBP14.35□□□□□ -0.11
LINC01878-201ENST00000434559 SAMD1Q6SPF0 538 aaPredicted RBP14.31□□□□□ -0.12
LINC01878-201ENST00000434559 U3KPZ7 1027 aaPredicted RBP14.3□□□□□ -0.12
LINC01878-201ENST00000434559 ATF5Q9Y2D1 282 aaPredicted RBP14.25□□□□□ -0.13
LINC01878-201ENST00000434559 FKBP8Q14318 412 aa14.23□□□□□ -0.13
LINC01878-201ENST00000434559 APLP2Q06481 763 aa14.05□□□□□ -0.16
LINC01878-201ENST00000434559 AMER1Q5JTC6 1135 aaPredicted RBP14.03□□□□□ -0.16
LINC01878-201ENST00000434559 RTN4Q9NQC3 1192 aaKnown RBP13.99□□□□□ -0.17
LINC01878-201ENST00000434559 ZNF219Q9P2Y4 722 aaPredicted RBP13.98□□□□□ -0.17
LINC01878-201ENST00000434559 POTEHQ6S545 545 aa13.77□□□□□ -0.21
LINC01878-201ENST00000434559 TRHP20396 242 aaPredicted RBP13.7□□□□□ -0.22
LINC01878-201ENST00000434559 SPINK5Q9NQ38 1064 aaPredicted RBP13.7□□□□□ -0.22
LINC01878-201ENST00000434559 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
LINC01878-201ENST00000434559 SPDYE4A6NLX3 237 aa13.67□□□□□ -0.22
LINC01878-201ENST00000434559 CAPN15O75808 1086 aa13.66□□□□□ -0.22
LINC01878-201ENST00000434559 FBLN2P98095 1184 aa13.65□□□□□ -0.22
LINC01878-201ENST00000434559 POLA2Q14181 598 aa13.62□□□□□ -0.23
LINC01878-201ENST00000434559 SLC24A1O60721 1099 aa13.61□□□□□ -0.23
LINC01878-201ENST00000434559 FBXO3Q9UK99 471 aa13.6□□□□□ -0.23
LINC01878-201ENST00000434559 DSG3P32926 999 aa13.56□□□□□ -0.24
LINC01878-201ENST00000434559 PROM2Q8N271 834 aa13.54□□□□□ -0.24
LINC01878-201ENST00000434559 ZBTB12Q9Y330 459 aaPredicted RBP13.48□□□□□ -0.25
LINC01878-201ENST00000434559 ABCB7O75027 752 aa13.4□□□□□ -0.26
LINC01878-201ENST00000434559 VASPP50552 380 aaPredicted RBP13.38□□□□□ -0.27
LINC01878-201ENST00000434559 IFNLR1Q8IU57 520 aaPredicted RBP13.23□□□□□ -0.29
LINC01878-201ENST00000434559 ZNF692Q9BU19 519 aaPredicted RBP13.18□□□□□ -0.3
LINC01878-201ENST00000434559 SPDYE2BA6NHP3 402 aa13.15□□□□□ -0.3
LINC01878-201ENST00000434559 SPDYE6P0CI01 402 aa13.15□□□□□ -0.3
LINC01878-201ENST00000434559 SPDYE2Q495Y8 402 aa13.15□□□□□ -0.3
LINC01878-201ENST00000434559 OSCARQ8IYS5 282 aa13.13□□□□□ -0.31
LINC01878-201ENST00000434559 SSUH2Q9Y2M2 353 aa13.11□□□□□ -0.31
LINC01878-201ENST00000434559 STAG3Q9UJ98 1225 aa13.08□□□□□ -0.32
LINC01878-201ENST00000434559 RBM42Q9BTD8 480 aaKnown RBP13.03□□□□□ -0.32
LINC01878-201ENST00000434559 PKD2Q13563 968 aa13.02□□□□□ -0.33
LINC01878-201ENST00000434559 PABPN1Q86U42 306 aaKnown RBP eCLIP13.01□□□□□ -0.33
LINC01878-201ENST00000434559 KLHL34Q8N239 644 aa13□□□□□ -0.33
LINC01878-201ENST00000434559 SPOCK2Q92563 424 aa12.99□□□□□ -0.33
LINC01878-201ENST00000434559 DCAF8L2P0C7V8 631 aa12.95□□□□□ -0.34
LINC01878-201ENST00000434559 PLCB2Q00722 1185 aa12.94□□□□□ -0.34
LINC01878-201ENST00000434559 PLCD3Q8N3E9 789 aa12.94□□□□□ -0.34
LINC01878-201ENST00000434559 CHRDL2Q6WN34 429 aa12.91□□□□□ -0.34
LINC01878-201ENST00000434559 MIER1Q8N108 512 aa12.89□□□□□ -0.35
LINC01878-201ENST00000434559 ECM2O94769 699 aaPredicted RBP12.83□□□□□ -0.36
LINC01878-201ENST00000434559 PLEKHG5O94827 1062 aa12.8□□□□□ -0.36
LINC01878-201ENST00000434559 ZBTB47Q9UFB7 747 aaPredicted RBP12.79□□□□□ -0.36
LINC01878-201ENST00000434559 HAP1P54257 671 aaPredicted RBP12.73□□□□□ -0.37
LINC01878-201ENST00000434559 BBXQ8WY36 941 aaPredicted RBP12.69□□□□□ -0.38
LINC01878-201ENST00000434559 RGL2O15211 777 aa12.68□□□□□ -0.38
LINC01878-201ENST00000434559 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.68□□□□□ -0.38
LINC01878-201ENST00000434559 SP7Q8TDD2 431 aaPredicted RBP12.67□□□□□ -0.38
LINC01878-201ENST00000434559 CIZ1Q9ULV3 898 aaPredicted RBP12.66□□□□□ -0.38
LINC01878-201ENST00000434559 NPM1P06748 294 aaKnown RBP eCLIP12.64□□□□□ -0.39
LINC01878-201ENST00000434559 SPDYE1Q8NFV5 336 aaPredicted RBP12.62□□□□□ -0.39
LINC01878-201ENST00000434559 TRIM41Q8WV44 630 aa12.61□□□□□ -0.39
LINC01878-201ENST00000434559 AKT1S1Q96B36 256 aa12.61□□□□□ -0.39
LINC01878-201ENST00000434559 VSIG10Q8N0Z9 540 aa12.58□□□□□ -0.4
LINC01878-201ENST00000434559 PAXIP1Q6ZW49 1069 aaPredicted RBP12.55□□□□□ -0.4
LINC01878-201ENST00000434559 GSE1Q14687 1217 aa12.54□□□□□ -0.4
LINC01878-201ENST00000434559 CHGAP10645 457 aaKnown RBP12.51□□□□□ -0.41
LINC01878-201ENST00000434559 CFAP44Q96MT7 982 aa12.51□□□□□ -0.41
LINC01878-201ENST00000434559 NUBP1P53384 320 aa12.5□□□□□ -0.41
LINC01878-201ENST00000434559 CLEC11AQ9Y240 323 aa12.5□□□□□ -0.41
LINC01878-201ENST00000434559 PRR29P0C7W0 189 aa12.49□□□□□ -0.41
LINC01878-201ENST00000434559 HAX1O00165 279 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms