RNA–Protein interactions for RNA: ENST00000424684.2

AC239800.3-201, humanhuman

TSL 5 BASIC

Gene AC239800.3, Length 5,243 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC239800.3-201ENST00000424684 DCAF8L2P0C7V8 631 aa25.31■■□□□ 1.64
AC239800.3-201ENST00000424684 SUPT5HO00267 1087 aaKnown RBP24.16■■□□□ 1.46
AC239800.3-201ENST00000424684 PELP1Q8IZL8 1130 aaKnown RBP23.89■■□□□ 1.42
AC239800.3-201ENST00000424684 SHROOM4Q9ULL8 1493 aa23.43■■□□□ 1.34
AC239800.3-201ENST00000424684 NISCHQ9Y2I1 1504 aa23.4■■□□□ 1.34
AC239800.3-201ENST00000424684 EHMT2Q96KQ7 1210 aa23.38■■□□□ 1.33
AC239800.3-201ENST00000424684 APLP2Q06481 763 aa23.36■■□□□ 1.33
AC239800.3-201ENST00000424684 FAM9AQ8IZU1 332 aaPredicted RBP22.96■■□□□ 1.27
AC239800.3-201ENST00000424684 CENPBP07199 599 aaPredicted RBP22.85■■□□□ 1.25
AC239800.3-201ENST00000424684 CCER1Q8TC90 406 aaPredicted RBP22.81■■□□□ 1.24
AC239800.3-201ENST00000424684 ERICH6Q7L0X2 663 aa22.8■■□□□ 1.24
AC239800.3-201ENST00000424684 PCGF6Q9BYE7 350 aa22.8■■□□□ 1.24
AC239800.3-201ENST00000424684 ZEB1P37275 1124 aaPredicted RBP22.74■■□□□ 1.23
AC239800.3-201ENST00000424684 TTBK1Q5TCY1 1321 aaPredicted RBP22.67■■□□□ 1.22
AC239800.3-201ENST00000424684 TRIM41Q8WV44 630 aa22.41■■□□□ 1.18
AC239800.3-201ENST00000424684 NEFLP07196 543 aa22.39■■□□□ 1.17
AC239800.3-201ENST00000424684 RANGAP1P46060 587 aaPredicted RBP22.37■■□□□ 1.17
AC239800.3-201ENST00000424684 MYT1Q01538 1121 aa22.36■■□□□ 1.17
AC239800.3-201ENST00000424684 ATP1B4Q9UN42 357 aaPredicted RBP22.3■■□□□ 1.16
AC239800.3-201ENST00000424684 UBTFP17480 764 aaKnown RBP22.23■■□□□ 1.15
AC239800.3-201ENST00000424684 YTHDC1Q96MU7 727 aaKnown RBP22.08■■□□□ 1.13
AC239800.3-201ENST00000424684 TRIM26Q12899 539 aaPredicted RBP21.83■■□□□ 1.09
AC239800.3-201ENST00000424684 DAXXQ9UER7 740 aaPredicted RBP21.82■■□□□ 1.08
AC239800.3-201ENST00000424684 PPARGC1BQ86YN6 1023 aaKnown RBP21.71■■□□□ 1.07
AC239800.3-201ENST00000424684 HRCP23327 699 aa21.65■■□□□ 1.06
AC239800.3-201ENST00000424684 POLR3GLQ9BT43 218 aa21.56■■□□□ 1.04
AC239800.3-201ENST00000424684 ITGAEP38570 1179 aa21.53■■□□□ 1.04
AC239800.3-201ENST00000424684 MYT1LQ9UL68 1186 aa21.49■■□□□ 1.03
AC239800.3-201ENST00000424684 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.48■■□□□ 1.03
AC239800.3-201ENST00000424684 HNRNPUL2Q1KMD3 747 aaKnown RBP21.48■■□□□ 1.03
AC239800.3-201ENST00000424684 RTL5Q5HYW3 569 aaPredicted RBP21.33■■□□□ 1
AC239800.3-201ENST00000424684 LOC105371045A0A1W2PR82 267 aa21.27■■□□□ 1
AC239800.3-201ENST00000424684 CNGB1Q14028 1251 aaPredicted RBP21.26■□□□□ 0.99
AC239800.3-201ENST00000424684 CHIC1Q5VXU3 224 aa21.26■□□□□ 0.99
AC239800.3-201ENST00000424684 ZNF316A6NFI3 1004 aaPredicted RBP21.25■□□□□ 0.99
AC239800.3-201ENST00000424684 CLSPNQ9HAW4 1339 aa21.23■□□□□ 0.99
AC239800.3-201ENST00000424684 DIEXFQ68CQ4 756 aaKnown RBP21.19■□□□□ 0.98
AC239800.3-201ENST00000424684 SLC4A1APQ9BWU0 796 aaKnown RBP21.15■□□□□ 0.98
AC239800.3-201ENST00000424684 FAM50AQ14320 339 aaKnown RBP20.97■□□□□ 0.95
AC239800.3-201ENST00000424684 TRIM52Q96A61 297 aa20.93■□□□□ 0.94
AC239800.3-201ENST00000424684 ANP32CO43423 234 aa20.86■□□□□ 0.93
AC239800.3-201ENST00000424684 CDK11AQ9UQ88 783 aaPredicted RBP20.85■□□□□ 0.93
AC239800.3-201ENST00000424684 ZBTB47Q9UFB7 747 aaPredicted RBP20.85■□□□□ 0.93
AC239800.3-201ENST00000424684 NEUROD1Q13562 356 aa20.83■□□□□ 0.93
AC239800.3-201ENST00000424684 BCANQ96GW7 911 aa20.79■□□□□ 0.92
AC239800.3-201ENST00000424684 GTF3C3Q9Y5Q9 886 aa20.79■□□□□ 0.92
AC239800.3-201ENST00000424684 ZNF326Q5BKZ1 582 aaKnown RBP20.69■□□□□ 0.9
AC239800.3-201ENST00000424684 CANXP27824 592 aaKnown RBP20.62■□□□□ 0.89
AC239800.3-201ENST00000424684 NEFMP07197 916 aa20.6■□□□□ 0.89
AC239800.3-201ENST00000424684 ANP32AP39687 249 aaKnown RBP20.55■□□□□ 0.88
AC239800.3-201ENST00000424684 ACIN1Q9UKV3 1341 aaKnown RBP20.47■□□□□ 0.87
AC239800.3-201ENST00000424684 SLC24A1O60721 1099 aa20.45■□□□□ 0.86
AC239800.3-201ENST00000424684 BCL11AQ9H165 835 aa20.41■□□□□ 0.86
AC239800.3-201ENST00000424684 PABPN1Q86U42 306 aaKnown RBP eCLIP20.38■□□□□ 0.85
AC239800.3-201ENST00000424684 FBLN2P98095 1184 aa20.36■□□□□ 0.85
AC239800.3-201ENST00000424684 ANP32BQ92688 251 aaKnown RBP20.34■□□□□ 0.85
AC239800.3-201ENST00000424684 CSRNP3Q8WYN3 585 aa20.31■□□□□ 0.84
AC239800.3-201ENST00000424684 NPM2Q86SE8 214 aaKnown RBP20.3■□□□□ 0.84
AC239800.3-201ENST00000424684 UPF2Q9HAU5 1272 aaKnown RBP20.25■□□□□ 0.83
AC239800.3-201ENST00000424684 HSP90AA1P07900 732 aaKnown RBP20.24■□□□□ 0.83
AC239800.3-201ENST00000424684 P3H3Q8IVL6 736 aa20.23■□□□□ 0.83
AC239800.3-201ENST00000424684 FKBP8Q14318 412 aa20.21■□□□□ 0.83
AC239800.3-201ENST00000424684 ZNF777Q9ULD5 760 aaPredicted RBP20.2■□□□□ 0.82
AC239800.3-201ENST00000424684 ABCC9O60706 1549 aa20.19■□□□□ 0.82
AC239800.3-201ENST00000424684 TONSLQ96HA7 1378 aa20.19■□□□□ 0.82
AC239800.3-201ENST00000424684 EIF5BO60841 1220 aaKnown RBP20.18■□□□□ 0.82
AC239800.3-201ENST00000424684 HNRNPUQ00839 825 aaKnown RBP eCLIP20.16■□□□□ 0.82
AC239800.3-201ENST00000424684 ARID3CA6NKF2 412 aa20.16■□□□□ 0.82
AC239800.3-201ENST00000424684 ESF1Q9H501 851 aaKnown RBP20.08■□□□□ 0.81
AC239800.3-201ENST00000424684 GLIPR1L2Q4G1C9 344 aa20.07■□□□□ 0.8
AC239800.3-201ENST00000424684 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.07■□□□□ 0.8
AC239800.3-201ENST00000424684 FAM9BQ8IZU0 186 aa20.06■□□□□ 0.8
AC239800.3-201ENST00000424684 DDX10Q13206 875 aaKnown RBP20.04■□□□□ 0.8
AC239800.3-201ENST00000424684 CCDC136Q96JN2 1154 aa20.04■□□□□ 0.8
AC239800.3-201ENST00000424684 CHGAP10645 457 aaKnown RBP20.01■□□□□ 0.79
AC239800.3-201ENST00000424684 TMC1Q8TDI8 760 aa20.01■□□□□ 0.79
AC239800.3-201ENST00000424684 STAG3Q9UJ98 1225 aa20■□□□□ 0.79
AC239800.3-201ENST00000424684 SALL2Q9Y467 1007 aaPredicted RBP19.93■□□□□ 0.78
AC239800.3-201ENST00000424684 WDR43Q15061 677 aaKnown RBP eCLIP19.92■□□□□ 0.78
AC239800.3-201ENST00000424684 MRS2Q9HD23 443 aa19.89■□□□□ 0.77
AC239800.3-201ENST00000424684 DCAF1Q9Y4B6 1507 aa19.87■□□□□ 0.77
AC239800.3-201ENST00000424684 NBR1Q14596 966 aa19.85■□□□□ 0.77
AC239800.3-201ENST00000424684 NPM1P06748 294 aaKnown RBP eCLIP19.85■□□□□ 0.77
AC239800.3-201ENST00000424684 TSPY4P0CV99 314 aa19.8■□□□□ 0.76
AC239800.3-201ENST00000424684 TSPY10P0CW01 314 aa19.8■□□□□ 0.76
AC239800.3-201ENST00000424684 MYH16Q9H6N6 1097 aa19.8■□□□□ 0.76
AC239800.3-201ENST00000424684 CHIC2Q9UKJ5 165 aa19.79■□□□□ 0.76
AC239800.3-201ENST00000424684 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.77■□□□□ 0.76
AC239800.3-201ENST00000424684 ARXQ96QS3 562 aa19.75■□□□□ 0.75
AC239800.3-201ENST00000424684 ANP32EQ9BTT0 268 aa19.75■□□□□ 0.75
AC239800.3-201ENST00000424684 BECN1Q14457 450 aa19.73■□□□□ 0.75
AC239800.3-201ENST00000424684 DDRGK1Q96HY6 314 aa19.72■□□□□ 0.75
AC239800.3-201ENST00000424684 EIF4G2P78344 907 aaKnown RBP eCLIP19.72■□□□□ 0.75
AC239800.3-201ENST00000424684 KDM2AQ9Y2K7 1162 aa19.71■□□□□ 0.75
AC239800.3-201ENST00000424684 MTUS2Q5JR59 1369 aa19.7■□□□□ 0.74
AC239800.3-201ENST00000424684 CDK11BP21127 795 aaKnown RBP19.69■□□□□ 0.74
AC239800.3-201ENST00000424684 MIER1Q8N108 512 aa19.68■□□□□ 0.74
AC239800.3-201ENST00000424684 NCLP19338 710 aaKnown RBP19.67■□□□□ 0.74
AC239800.3-201ENST00000424684 GOLGA6L22H0YM25 854 aa19.66■□□□□ 0.74
AC239800.3-201ENST00000424684 IRX6P78412 446 aaPredicted RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms