RNA–Protein interactions for RNA: ENST00000424401.1

USP9YP4-201, Transcript of USP9Y pseudogene 4, humanhuman

BASIC

Gene USP9YP4, Length 1,745 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9YP4-201ENST00000424401 AEBP2Q6ZN18 517 aaPredicted RBP18.55■□□□□ 0.56
USP9YP4-201ENST00000424401 CHIC1Q5VXU3 224 aa17.35■□□□□ 0.37
USP9YP4-201ENST00000424401 SENP3Q9H4L4 574 aaPredicted RBP15.71■□□□□ 0.11
USP9YP4-201ENST00000424401 PHF23Q9BUL5 403 aaPredicted RBP15.54■□□□□ 0.08
USP9YP4-201ENST00000424401 FOXD1Q16676 465 aa14.76□□□□□ -0.05
USP9YP4-201ENST00000424401 POTEDQ86YR6 584 aa13.85□□□□□ -0.19
USP9YP4-201ENST00000424401 MSH5O43196 834 aa13.77□□□□□ -0.21
USP9YP4-201ENST00000424401 PLPPR3Q6T4P5 718 aa13.73□□□□□ -0.21
USP9YP4-201ENST00000424401 PPP6R1Q9UPN7 881 aa13.71□□□□□ -0.21
USP9YP4-201ENST00000424401 PIAS4Q8N2W9 510 aaPredicted RBP13.68□□□□□ -0.22
USP9YP4-201ENST00000424401 ADRA2BP18089 450 aa13.61□□□□□ -0.23
USP9YP4-201ENST00000424401 MAPK8IP2Q13387 824 aaPredicted RBP12.59□□□□□ -0.39
USP9YP4-201ENST00000424401 DMRT2Q9Y5R5 561 aa12.47□□□□□ -0.41
USP9YP4-201ENST00000424401 SCAF1Q9H7N4 1312 aaKnown RBP12.3□□□□□ -0.44
USP9YP4-201ENST00000424401 KCNA4P22459 653 aa12.1□□□□□ -0.47
USP9YP4-201ENST00000424401 PPP4R3CPQ6ZMV5 832 aa12.05□□□□□ -0.48
USP9YP4-201ENST00000424401 HOXD11P31277 338 aaPredicted RBP11.95□□□□□ -0.5
USP9YP4-201ENST00000424401 CACNB1Q02641 598 aaPredicted RBP11.94□□□□□ -0.5
USP9YP4-201ENST00000424401 DCAF8L1A6NGE4 600 aa11.91□□□□□ -0.5
USP9YP4-201ENST00000424401 EHMT2Q96KQ7 1210 aa11.89□□□□□ -0.51
USP9YP4-201ENST00000424401 CNKSR2Q8WXI2 1034 aa11.83□□□□□ -0.52
USP9YP4-201ENST00000424401 RNF39Q9H2S5 420 aa11.8□□□□□ -0.52
USP9YP4-201ENST00000424401 RNF216Q9NWF9 866 aaPredicted RBP11.78□□□□□ -0.52
USP9YP4-201ENST00000424401 NCBP3Q53F19 620 aaKnown RBP11.72□□□□□ -0.53
USP9YP4-201ENST00000424401 SLC4A1APQ9BWU0 796 aaKnown RBP11.65□□□□□ -0.54
USP9YP4-201ENST00000424401 C1QBPQ07021 282 aaKnown RBP11.57□□□□□ -0.56
USP9YP4-201ENST00000424401 DNAJC5BQ9UF47 199 aa11.52□□□□□ -0.56
USP9YP4-201ENST00000424401 NPM3O75607 178 aaKnown RBP11.49□□□□□ -0.57
USP9YP4-201ENST00000424401 CSRNP3Q8WYN3 585 aa11.45□□□□□ -0.58
USP9YP4-201ENST00000424401 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.32□□□□□ -0.6
USP9YP4-201ENST00000424401 U3KPZ7 1027 aaPredicted RBP11.15□□□□□ -0.63
USP9YP4-201ENST00000424401 ZBTB22O15209 634 aa11.1□□□□□ -0.63
USP9YP4-201ENST00000424401 SPINK5Q9NQ38 1064 aaPredicted RBP11.06□□□□□ -0.64
USP9YP4-201ENST00000424401 FOXD4L1Q9NU39 408 aa11.02□□□□□ -0.65
USP9YP4-201ENST00000424401 DSG3P32926 999 aa11.01□□□□□ -0.65
USP9YP4-201ENST00000424401 SLC4A2P04920 1241 aa10.97□□□□□ -0.65
USP9YP4-201ENST00000424401 CAPN15O75808 1086 aa10.95□□□□□ -0.66
USP9YP4-201ENST00000424401 POTEHQ6S545 545 aa10.79□□□□□ -0.68
USP9YP4-201ENST00000424401 TRHP20396 242 aaPredicted RBP10.75□□□□□ -0.69
USP9YP4-201ENST00000424401 ABCB7O75027 752 aa10.73□□□□□ -0.69
USP9YP4-201ENST00000424401 ZNF219Q9P2Y4 722 aaPredicted RBP10.69□□□□□ -0.7
USP9YP4-201ENST00000424401 MYCNP04198 464 aaPredicted RBP10.64□□□□□ -0.71
USP9YP4-201ENST00000424401 APLP2Q06481 763 aa10.63□□□□□ -0.71
USP9YP4-201ENST00000424401 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.62□□□□□ -0.71
USP9YP4-201ENST00000424401 SLC24A1O60721 1099 aa10.62□□□□□ -0.71
USP9YP4-201ENST00000424401 HNRNPUL2Q1KMD3 747 aaKnown RBP10.62□□□□□ -0.71
USP9YP4-201ENST00000424401 SAMD1Q6SPF0 538 aaPredicted RBP10.58□□□□□ -0.72
USP9YP4-201ENST00000424401 ATXN8OSP0DMR3 200 aa10.58□□□□□ -0.72
USP9YP4-201ENST00000424401 POLA2Q14181 598 aa10.44□□□□□ -0.74
USP9YP4-201ENST00000424401 RBM42Q9BTD8 480 aaKnown RBP10.39□□□□□ -0.75
USP9YP4-201ENST00000424401 FKBP8Q14318 412 aa10.38□□□□□ -0.75
USP9YP4-201ENST00000424401 ATF5Q9Y2D1 282 aaPredicted RBP10.37□□□□□ -0.75
USP9YP4-201ENST00000424401 RTN4Q9NQC3 1192 aaKnown RBP10.32□□□□□ -0.76
USP9YP4-201ENST00000424401 CHRDL2Q6WN34 429 aa10.3□□□□□ -0.76
USP9YP4-201ENST00000424401 AMER1Q5JTC6 1135 aaPredicted RBP10.3□□□□□ -0.76
USP9YP4-201ENST00000424401 AKT1S1Q96B36 256 aa10.16□□□□□ -0.78
USP9YP4-201ENST00000424401 OSCARQ8IYS5 282 aa10.13□□□□□ -0.79
USP9YP4-201ENST00000424401 ZBTB12Q9Y330 459 aaPredicted RBP10.11□□□□□ -0.79
USP9YP4-201ENST00000424401 REM2Q8IYK8 340 aaPredicted RBP10.1□□□□□ -0.79
USP9YP4-201ENST00000424401 PIP4P2Q8N4L2 257 aa10.05□□□□□ -0.8
USP9YP4-201ENST00000424401 PITPNM1O00562 1244 aa10.02□□□□□ -0.81
USP9YP4-201ENST00000424401 SP7Q8TDD2 431 aaPredicted RBP10.02□□□□□ -0.81
USP9YP4-201ENST00000424401 FXR2P51116 673 aaKnown RBP eCLIP9.96□□□□□ -0.81
USP9YP4-201ENST00000424401 SPDYE4A6NLX3 237 aa9.92□□□□□ -0.82
USP9YP4-201ENST00000424401 FBXO3Q9UK99 471 aa9.9□□□□□ -0.82
USP9YP4-201ENST00000424401 FBLN2P98095 1184 aa9.9□□□□□ -0.83
USP9YP4-201ENST00000424401 HAX1O00165 279 aa9.87□□□□□ -0.83
USP9YP4-201ENST00000424401 EVX2Q03828 476 aa9.87□□□□□ -0.83
USP9YP4-201ENST00000424401 MKRN4PQ13434 485 aaPredicted RBP9.87□□□□□ -0.83
USP9YP4-201ENST00000424401 NISCHQ9Y2I1 1504 aa9.85□□□□□ -0.83
USP9YP4-201ENST00000424401 SPDYE2BA6NHP3 402 aa9.85□□□□□ -0.83
USP9YP4-201ENST00000424401 SPDYE6P0CI01 402 aa9.85□□□□□ -0.83
USP9YP4-201ENST00000424401 SPDYE2Q495Y8 402 aa9.85□□□□□ -0.83
USP9YP4-201ENST00000424401 SSUH2Q9Y2M2 353 aa9.75□□□□□ -0.85
USP9YP4-201ENST00000424401 PRKAR2AP13861 404 aaKnown RBP9.72□□□□□ -0.85
USP9YP4-201ENST00000424401 VASPP50552 380 aaPredicted RBP9.72□□□□□ -0.85
USP9YP4-201ENST00000424401 PROM2Q8N271 834 aa9.72□□□□□ -0.85
USP9YP4-201ENST00000424401 CLEC11AQ9Y240 323 aa9.72□□□□□ -0.85
USP9YP4-201ENST00000424401 SPDYE1Q8NFV5 336 aaPredicted RBP9.7□□□□□ -0.86
USP9YP4-201ENST00000424401 ZNF692Q9BU19 519 aaPredicted RBP9.7□□□□□ -0.86
USP9YP4-201ENST00000424401 C19orf67A6NJJ6 358 aa9.65□□□□□ -0.87
USP9YP4-201ENST00000424401 CHADLQ6NUI6 762 aa9.62□□□□□ -0.87
USP9YP4-201ENST00000424401 IFNLR1Q8IU57 520 aaPredicted RBP9.6□□□□□ -0.87
USP9YP4-201ENST00000424401 DCAF8L2P0C7V8 631 aa9.59□□□□□ -0.87
USP9YP4-201ENST00000424401 PABPN1Q86U42 306 aaKnown RBP eCLIP9.58□□□□□ -0.88
USP9YP4-201ENST00000424401 GABBR2O75899 941 aa9.55□□□□□ -0.88
USP9YP4-201ENST00000424401 PRR29P0C7W0 189 aa9.52□□□□□ -0.89
USP9YP4-201ENST00000424401 KLHL34Q8N239 644 aa9.52□□□□□ -0.89
USP9YP4-201ENST00000424401 PLCB2Q00722 1185 aa9.48□□□□□ -0.89
USP9YP4-201ENST00000424401 STAG3Q9UJ98 1225 aa9.47□□□□□ -0.89
USP9YP4-201ENST00000424401 PKD2Q13563 968 aa9.45□□□□□ -0.9
USP9YP4-201ENST00000424401 PLCD3Q8N3E9 789 aa9.45□□□□□ -0.9
USP9YP4-201ENST00000424401 SPOCK2Q92563 424 aa9.45□□□□□ -0.9
USP9YP4-201ENST00000424401 POTEIP0CG38 1075 aa9.42□□□□□ -0.9
USP9YP4-201ENST00000424401 FARP1Q9Y4F1 1045 aaPredicted RBP9.42□□□□□ -0.9
USP9YP4-201ENST00000424401 HAP1P54257 671 aaPredicted RBP9.4□□□□□ -0.9
USP9YP4-201ENST00000424401 CD44P16070 742 aaKnown RBP9.39□□□□□ -0.91
USP9YP4-201ENST00000424401 PRKCSHP14314 528 aaPredicted RBP9.39□□□□□ -0.91
USP9YP4-201ENST00000424401 LHX8Q68G74 356 aa9.39□□□□□ -0.91
USP9YP4-201ENST00000424401 MIER1Q8N108 512 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms