RNA–Protein interactions for RNA: ENST00000421306.7

PITPNM3-202, Transcript of PITPNM family member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PITPNM3, Length 6,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM3-202ENST00000421306 DCAF8L2P0C7V8 631 aa22.06■■□□□ 1.12
PITPNM3-202ENST00000421306 EHMT2Q96KQ7 1210 aa20.9■□□□□ 0.94
PITPNM3-202ENST00000421306 SUPT5HO00267 1087 aaKnown RBP20.27■□□□□ 0.84
PITPNM3-202ENST00000421306 SHROOM4Q9ULL8 1493 aa20.01■□□□□ 0.79
PITPNM3-202ENST00000421306 TTBK1Q5TCY1 1321 aaPredicted RBP19.95■□□□□ 0.78
PITPNM3-202ENST00000421306 PELP1Q8IZL8 1130 aaKnown RBP19.88■□□□□ 0.77
PITPNM3-202ENST00000421306 RANGAP1P46060 587 aaPredicted RBP19.74■□□□□ 0.75
PITPNM3-202ENST00000421306 APLP2Q06481 763 aa19.65■□□□□ 0.74
PITPNM3-202ENST00000421306 ATP1B4Q9UN42 357 aaPredicted RBP19.58■□□□□ 0.73
PITPNM3-202ENST00000421306 FAM9AQ8IZU1 332 aaPredicted RBP19.53■□□□□ 0.72
PITPNM3-202ENST00000421306 ERICH6Q7L0X2 663 aa19.43■□□□□ 0.7
PITPNM3-202ENST00000421306 CHIC1Q5VXU3 224 aa19.17■□□□□ 0.66
PITPNM3-202ENST00000421306 PCGF6Q9BYE7 350 aa19.13■□□□□ 0.65
PITPNM3-202ENST00000421306 MYT1LQ9UL68 1186 aa19.11■□□□□ 0.65
PITPNM3-202ENST00000421306 MYT1Q01538 1121 aa19.08■□□□□ 0.65
PITPNM3-202ENST00000421306 CCER1Q8TC90 406 aaPredicted RBP18.95■□□□□ 0.62
PITPNM3-202ENST00000421306 CENPBP07199 599 aaPredicted RBP18.91■□□□□ 0.62
PITPNM3-202ENST00000421306 YTHDC1Q96MU7 727 aaKnown RBP18.89■□□□□ 0.61
PITPNM3-202ENST00000421306 CNGB1Q14028 1251 aaPredicted RBP18.88■□□□□ 0.61
PITPNM3-202ENST00000421306 POLR3GLQ9BT43 218 aa18.88■□□□□ 0.61
PITPNM3-202ENST00000421306 PPARGC1BQ86YN6 1023 aaKnown RBP18.87■□□□□ 0.61
PITPNM3-202ENST00000421306 SLC4A1APQ9BWU0 796 aaKnown RBP18.76■□□□□ 0.59
PITPNM3-202ENST00000421306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.7■□□□□ 0.58
PITPNM3-202ENST00000421306 HNRNPUL2Q1KMD3 747 aaKnown RBP18.7■□□□□ 0.58
PITPNM3-202ENST00000421306 UBTFP17480 764 aaKnown RBP18.68■□□□□ 0.58
PITPNM3-202ENST00000421306 ZEB1P37275 1124 aaPredicted RBP18.65■□□□□ 0.58
PITPNM3-202ENST00000421306 NEFLP07196 543 aa18.63■□□□□ 0.57
PITPNM3-202ENST00000421306 ITGAEP38570 1179 aa18.55■□□□□ 0.56
PITPNM3-202ENST00000421306 DAXXQ9UER7 740 aaPredicted RBP18.52■□□□□ 0.56
PITPNM3-202ENST00000421306 TRIM41Q8WV44 630 aa18.47■□□□□ 0.55
PITPNM3-202ENST00000421306 NISCHQ9Y2I1 1504 aa18.36■□□□□ 0.53
PITPNM3-202ENST00000421306 BCL11AQ9H165 835 aa18.34■□□□□ 0.53
PITPNM3-202ENST00000421306 SLC24A1O60721 1099 aa18.33■□□□□ 0.52
PITPNM3-202ENST00000421306 CLSPNQ9HAW4 1339 aa18.17■□□□□ 0.5
PITPNM3-202ENST00000421306 PLPPR3Q6T4P5 718 aa18.13■□□□□ 0.49
PITPNM3-202ENST00000421306 ZNF316A6NFI3 1004 aaPredicted RBP18.08■□□□□ 0.49
PITPNM3-202ENST00000421306 BCANQ96GW7 911 aa18.07■□□□□ 0.48
PITPNM3-202ENST00000421306 ZNF326Q5BKZ1 582 aaKnown RBP17.84■□□□□ 0.45
PITPNM3-202ENST00000421306 TRIM52Q96A61 297 aa17.82■□□□□ 0.44
PITPNM3-202ENST00000421306 FBLN2P98095 1184 aa17.82■□□□□ 0.44
PITPNM3-202ENST00000421306 FAM50AQ14320 339 aaKnown RBP17.81■□□□□ 0.44
PITPNM3-202ENST00000421306 HRCP23327 699 aa17.79■□□□□ 0.44
PITPNM3-202ENST00000421306 ZBTB47Q9UFB7 747 aaPredicted RBP17.79■□□□□ 0.44
PITPNM3-202ENST00000421306 TRIM26Q12899 539 aaPredicted RBP17.76■□□□□ 0.43
PITPNM3-202ENST00000421306 RTL5Q5HYW3 569 aaPredicted RBP17.75■□□□□ 0.43
PITPNM3-202ENST00000421306 ARID3CA6NKF2 412 aa17.74■□□□□ 0.43
PITPNM3-202ENST00000421306 NEUROD1Q13562 356 aa17.73■□□□□ 0.43
PITPNM3-202ENST00000421306 SENP3Q9H4L4 574 aaPredicted RBP17.73■□□□□ 0.43
PITPNM3-202ENST00000421306 LOC105371045A0A1W2PR82 267 aa17.65■□□□□ 0.42
PITPNM3-202ENST00000421306 A0A0G2JS52 829 aa17.65■□□□□ 0.42
PITPNM3-202ENST00000421306 CANXP27824 592 aaKnown RBP17.65■□□□□ 0.42
PITPNM3-202ENST00000421306 PLEKHG5O94827 1062 aa17.61■□□□□ 0.41
PITPNM3-202ENST00000421306 SCAF1Q9H7N4 1312 aaKnown RBP17.61■□□□□ 0.41
PITPNM3-202ENST00000421306 PABPN1Q86U42 306 aaKnown RBP eCLIP17.58■□□□□ 0.41
PITPNM3-202ENST00000421306 NEFMP07197 916 aa17.45■□□□□ 0.38
PITPNM3-202ENST00000421306 ESF1Q9H501 851 aaKnown RBP17.44■□□□□ 0.38
PITPNM3-202ENST00000421306 CHGAP10645 457 aaKnown RBP17.41■□□□□ 0.38
PITPNM3-202ENST00000421306 STAG3Q9UJ98 1225 aa17.4■□□□□ 0.38
PITPNM3-202ENST00000421306 ZBTB7CA1YPR0 619 aa17.4■□□□□ 0.38
PITPNM3-202ENST00000421306 DIEXFQ68CQ4 756 aaKnown RBP17.38■□□□□ 0.37
PITPNM3-202ENST00000421306 ZNF777Q9ULD5 760 aaPredicted RBP17.37■□□□□ 0.37
PITPNM3-202ENST00000421306 NPM2Q86SE8 214 aaKnown RBP17.35■□□□□ 0.37
PITPNM3-202ENST00000421306 TULP1O00294 542 aaPredicted RBP17.35■□□□□ 0.37
PITPNM3-202ENST00000421306 P3H3Q8IVL6 736 aa17.33■□□□□ 0.37
PITPNM3-202ENST00000421306 GTF3C3Q9Y5Q9 886 aa17.23■□□□□ 0.35
PITPNM3-202ENST00000421306 CDK11AQ9UQ88 783 aaPredicted RBP17.23■□□□□ 0.35
PITPNM3-202ENST00000421306 ANP32CO43423 234 aa17.21■□□□□ 0.35
PITPNM3-202ENST00000421306 ARXQ96QS3 562 aa17.19■□□□□ 0.34
PITPNM3-202ENST00000421306 SALL2Q9Y467 1007 aaPredicted RBP17.19■□□□□ 0.34
PITPNM3-202ENST00000421306 HSP90AA1P07900 732 aaKnown RBP17.17■□□□□ 0.34
PITPNM3-202ENST00000421306 C14orf37Q86TY3 774 aa17.15■□□□□ 0.34
PITPNM3-202ENST00000421306 NCBP3Q53F19 620 aaKnown RBP17.14■□□□□ 0.33
PITPNM3-202ENST00000421306 ABCC9O60706 1549 aa17.09■□□□□ 0.33
PITPNM3-202ENST00000421306 SENP3-EIF4A1A0A087X0R7 540 aa17.07■□□□□ 0.32
PITPNM3-202ENST00000421306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.06■□□□□ 0.32
PITPNM3-202ENST00000421306 CDK11BP21127 795 aaKnown RBP17.05■□□□□ 0.32
PITPNM3-202ENST00000421306 TAOK2Q9UL54 1235 aa17.04■□□□□ 0.32
PITPNM3-202ENST00000421306 EIF5BO60841 1220 aaKnown RBP17.03■□□□□ 0.32
PITPNM3-202ENST00000421306 TPRNQ4KMQ1 711 aa17.01■□□□□ 0.31
PITPNM3-202ENST00000421306 HAP1P54257 671 aaPredicted RBP17■□□□□ 0.31
PITPNM3-202ENST00000421306 GLIPR1L2Q4G1C9 344 aa16.99■□□□□ 0.31
PITPNM3-202ENST00000421306 ANP32AP39687 249 aaKnown RBP16.99■□□□□ 0.31
PITPNM3-202ENST00000421306 ANP32BQ92688 251 aaKnown RBP16.99■□□□□ 0.31
PITPNM3-202ENST00000421306 NPM1P06748 294 aaKnown RBP eCLIP16.96■□□□□ 0.31
PITPNM3-202ENST00000421306 ACIN1Q9UKV3 1341 aaKnown RBP16.94■□□□□ 0.3
PITPNM3-202ENST00000421306 NPHP1O15259 732 aa16.89■□□□□ 0.29
PITPNM3-202ENST00000421306 FAM9BQ8IZU0 186 aa16.86■□□□□ 0.29
PITPNM3-202ENST00000421306 KDM2AQ9Y2K7 1162 aa16.84■□□□□ 0.29
PITPNM3-202ENST00000421306 ARID4BQ4LE39 1312 aaPredicted RBP16.83■□□□□ 0.29
PITPNM3-202ENST00000421306 UPF2Q9HAU5 1272 aaKnown RBP16.8■□□□□ 0.28
PITPNM3-202ENST00000421306 NBR1Q14596 966 aa16.8■□□□□ 0.28
PITPNM3-202ENST00000421306 LMOD2Q6P5Q4 547 aa16.78■□□□□ 0.28
PITPNM3-202ENST00000421306 CHIC2Q9UKJ5 165 aa16.77■□□□□ 0.28
PITPNM3-202ENST00000421306 PPP1R15AO75807 674 aaPredicted RBP16.74■□□□□ 0.27
PITPNM3-202ENST00000421306 CLSTN1O94985 981 aa16.73■□□□□ 0.27
PITPNM3-202ENST00000421306 PPM1GO15355 546 aaPredicted RBP16.7■□□□□ 0.26
PITPNM3-202ENST00000421306 WDR43Q15061 677 aaKnown RBP eCLIP16.7■□□□□ 0.26
PITPNM3-202ENST00000421306 FKBP8Q14318 412 aa16.69■□□□□ 0.26
PITPNM3-202ENST00000421306 AMER1Q5JTC6 1135 aaPredicted RBP16.67■□□□□ 0.26
PITPNM3-202ENST00000421306 HIRIP3Q9BW71 556 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms