RNA–Protein interactions for RNA: ENST00000421035.2

UTRN-206, Transcript of utrophin, humanhuman

TSL 2

Gene UTRN, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UTRN-206ENST00000421035 CHIC1Q5VXU3 224 aa28.53■■■□□ 2.16
UTRN-206ENST00000421035 AEBP2Q6ZN18 517 aaPredicted RBP28.51■■■□□ 2.15
UTRN-206ENST00000421035 PHF23Q9BUL5 403 aaPredicted RBP25.2■■□□□ 1.62
UTRN-206ENST00000421035 SENP3Q9H4L4 574 aaPredicted RBP24.04■■□□□ 1.44
UTRN-206ENST00000421035 PLPPR3Q6T4P5 718 aa23.49■■□□□ 1.35
UTRN-206ENST00000421035 FOXD1Q16676 465 aa22.24■■□□□ 1.15
UTRN-206ENST00000421035 ADRA2BP18089 450 aa22.05■■□□□ 1.12
UTRN-206ENST00000421035 PPP6R1Q9UPN7 881 aa22■■□□□ 1.11
UTRN-206ENST00000421035 KCNA4P22459 653 aa21.21■□□□□ 0.99
UTRN-206ENST00000421035 PIAS4Q8N2W9 510 aaPredicted RBP21.18■□□□□ 0.98
UTRN-206ENST00000421035 PPP4R3CPQ6ZMV5 832 aa20.83■□□□□ 0.93
UTRN-206ENST00000421035 EHMT2Q96KQ7 1210 aa20.66■□□□□ 0.9
UTRN-206ENST00000421035 NCBP3Q53F19 620 aaKnown RBP20.47■□□□□ 0.87
UTRN-206ENST00000421035 SLC4A1APQ9BWU0 796 aaKnown RBP20.32■□□□□ 0.84
UTRN-206ENST00000421035 NPM3O75607 178 aaKnown RBP20.2■□□□□ 0.82
UTRN-206ENST00000421035 MSH5O43196 834 aa20.18■□□□□ 0.82
UTRN-206ENST00000421035 SCAF1Q9H7N4 1312 aaKnown RBP20.09■□□□□ 0.81
UTRN-206ENST00000421035 CNKSR2Q8WXI2 1034 aa20.05■□□□□ 0.8
UTRN-206ENST00000421035 CSRNP3Q8WYN3 585 aa20.01■□□□□ 0.79
UTRN-206ENST00000421035 MAPK8IP2Q13387 824 aaPredicted RBP19.79■□□□□ 0.76
UTRN-206ENST00000421035 ZBTB22O15209 634 aa19.54■□□□□ 0.72
UTRN-206ENST00000421035 RNF216Q9NWF9 866 aaPredicted RBP19.46■□□□□ 0.71
UTRN-206ENST00000421035 DNAJC5BQ9UF47 199 aa19.38■□□□□ 0.69
UTRN-206ENST00000421035 DMRT2Q9Y5R5 561 aa19.31■□□□□ 0.68
UTRN-206ENST00000421035 FOXD4L1Q9NU39 408 aa19.27■□□□□ 0.68
UTRN-206ENST00000421035 HOXD11P31277 338 aaPredicted RBP19.18■□□□□ 0.66
UTRN-206ENST00000421035 SLC4A2P04920 1241 aa18.89■□□□□ 0.61
UTRN-206ENST00000421035 MYCNP04198 464 aaPredicted RBP18.63■□□□□ 0.57
UTRN-206ENST00000421035 DCAF8L1A6NGE4 600 aa18.52■□□□□ 0.56
UTRN-206ENST00000421035 ATXN8OSP0DMR3 200 aa18.49■□□□□ 0.55
UTRN-206ENST00000421035 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.34■□□□□ 0.539e-12■□□□□ 10.8
UTRN-206ENST00000421035 ATF5Q9Y2D1 282 aaPredicted RBP18.12■□□□□ 0.49
UTRN-206ENST00000421035 U3KPZ7 1027 aaPredicted RBP18.12■□□□□ 0.49
UTRN-206ENST00000421035 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.09■□□□□ 0.49
UTRN-206ENST00000421035 HNRNPUL2Q1KMD3 747 aaKnown RBP18.09■□□□□ 0.49
UTRN-206ENST00000421035 FKBP8Q14318 412 aa18.07■□□□□ 0.48
UTRN-206ENST00000421035 SAMD1Q6SPF0 538 aaPredicted RBP18.07■□□□□ 0.48
UTRN-206ENST00000421035 RTN4Q9NQC3 1192 aaKnown RBP17.76■□□□□ 0.43
UTRN-206ENST00000421035 APLP2Q06481 763 aa17.73■□□□□ 0.43
UTRN-206ENST00000421035 AMER1Q5JTC6 1135 aaPredicted RBP17.73■□□□□ 0.43
UTRN-206ENST00000421035 ZNF219Q9P2Y4 722 aaPredicted RBP17.73■□□□□ 0.43
UTRN-206ENST00000421035 TRHP20396 242 aaPredicted RBP17.42■□□□□ 0.38
UTRN-206ENST00000421035 SPINK5Q9NQ38 1064 aaPredicted RBP17.41■□□□□ 0.38
UTRN-206ENST00000421035 RNF39Q9H2S5 420 aa17.38■□□□□ 0.37
UTRN-206ENST00000421035 MKRN4PQ13434 485 aaPredicted RBP17.35■□□□□ 0.37
UTRN-206ENST00000421035 SPDYE4A6NLX3 237 aa17.32■□□□□ 0.36
UTRN-206ENST00000421035 CAPN15O75808 1086 aa17.31■□□□□ 0.36
UTRN-206ENST00000421035 FBLN2P98095 1184 aa17.28■□□□□ 0.36
UTRN-206ENST00000421035 POLA2Q14181 598 aa17.28■□□□□ 0.36
UTRN-206ENST00000421035 SLC24A1O60721 1099 aa17.24■□□□□ 0.35
UTRN-206ENST00000421035 C1QBPQ07021 282 aaKnown RBP17.19■□□□□ 0.34
UTRN-206ENST00000421035 FBXO3Q9UK99 471 aa17.17■□□□□ 0.34
UTRN-206ENST00000421035 POTEDQ86YR6 584 aa17.12■□□□□ 0.33
UTRN-206ENST00000421035 PROM2Q8N271 834 aa17.09■□□□□ 0.33
UTRN-206ENST00000421035 ABCB7O75027 752 aa17.08■□□□□ 0.32
UTRN-206ENST00000421035 ZBTB12Q9Y330 459 aaPredicted RBP17■□□□□ 0.31
UTRN-206ENST00000421035 VASPP50552 380 aaPredicted RBP16.95■□□□□ 0.3
UTRN-206ENST00000421035 DSG3P32926 999 aa16.8■□□□□ 0.28
UTRN-206ENST00000421035 IFNLR1Q8IU57 520 aaPredicted RBP16.78■□□□□ 0.28
UTRN-206ENST00000421035 ZNF692Q9BU19 519 aaPredicted RBP16.7■□□□□ 0.26
UTRN-206ENST00000421035 OSCARQ8IYS5 282 aa16.68■□□□□ 0.26
UTRN-206ENST00000421035 SPDYE2BA6NHP3 402 aa16.61■□□□□ 0.25
UTRN-206ENST00000421035 SPDYE6P0CI01 402 aa16.61■□□□□ 0.25
UTRN-206ENST00000421035 SPDYE2Q495Y8 402 aa16.61■□□□□ 0.25
UTRN-206ENST00000421035 SSUH2Q9Y2M2 353 aa16.57■□□□□ 0.24
UTRN-206ENST00000421035 DCAF8L2P0C7V8 631 aa16.52■□□□□ 0.24
UTRN-206ENST00000421035 KLHL34Q8N239 644 aa16.52■□□□□ 0.24
UTRN-206ENST00000421035 PABPN1Q86U42 306 aaKnown RBP eCLIP16.51■□□□□ 0.23
UTRN-206ENST00000421035 STAG3Q9UJ98 1225 aa16.51■□□□□ 0.23
UTRN-206ENST00000421035 PKD2Q13563 968 aa16.5■□□□□ 0.23
UTRN-206ENST00000421035 SPOCK2Q92563 424 aa16.45■□□□□ 0.22
UTRN-206ENST00000421035 CACNB1Q02641 598 aaPredicted RBP16.43■□□□□ 0.22
UTRN-206ENST00000421035 PLCD3Q8N3E9 789 aa16.43■□□□□ 0.22
UTRN-206ENST00000421035 PLCB2Q00722 1185 aa16.39■□□□□ 0.21
UTRN-206ENST00000421035 MIER1Q8N108 512 aa16.35■□□□□ 0.21
UTRN-206ENST00000421035 ECM2O94769 699 aaPredicted RBP16.29■□□□□ 0.2
UTRN-206ENST00000421035 HAP1P54257 671 aaPredicted RBP16.21■□□□□ 0.19
UTRN-206ENST00000421035 PLEKHG5O94827 1062 aa16.19■□□□□ 0.18
UTRN-206ENST00000421035 ZBTB47Q9UFB7 747 aaPredicted RBP16.13■□□□□ 0.17
UTRN-206ENST00000421035 RGL2O15211 777 aa16.11■□□□□ 0.17
UTRN-206ENST00000421035 CIZ1Q9ULV3 898 aaPredicted RBP16.11■□□□□ 0.17
UTRN-206ENST00000421035 NPM1P06748 294 aaKnown RBP eCLIP16.06■□□□□ 0.16
UTRN-206ENST00000421035 BBXQ8WY36 941 aaPredicted RBP16.06■□□□□ 0.16
UTRN-206ENST00000421035 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.05■□□□□ 0.16
UTRN-206ENST00000421035 RBM42Q9BTD8 480 aaKnown RBP15.97■□□□□ 0.15
UTRN-206ENST00000421035 SPDYE1Q8NFV5 336 aaPredicted RBP15.96■□□□□ 0.15
UTRN-206ENST00000421035 PAXIP1Q6ZW49 1069 aaPredicted RBP15.95■□□□□ 0.14
UTRN-206ENST00000421035 AKT1S1Q96B36 256 aa15.94■□□□□ 0.14
UTRN-206ENST00000421035 CFAP44Q96MT7 982 aa15.93■□□□□ 0.14
UTRN-206ENST00000421035 VSIG10Q8N0Z9 540 aa15.9■□□□□ 0.14
UTRN-206ENST00000421035 TRIM41Q8WV44 630 aa15.9■□□□□ 0.14
UTRN-206ENST00000421035 CLEC11AQ9Y240 323 aa15.9■□□□□ 0.14
UTRN-206ENST00000421035 CHGAP10645 457 aaKnown RBP15.88■□□□□ 0.13
UTRN-206ENST00000421035 GSE1Q14687 1217 aa15.86■□□□□ 0.13
UTRN-206ENST00000421035 NUBP1P53384 320 aa15.84■□□□□ 0.13
UTRN-206ENST00000421035 PRR29P0C7W0 189 aa15.83■□□□□ 0.12
UTRN-206ENST00000421035 REM2Q8IYK8 340 aaPredicted RBP15.81■□□□□ 0.12
UTRN-206ENST00000421035 SPRYD3Q8NCJ5 442 aa15.81■□□□□ 0.12
UTRN-206ENST00000421035 CREBZFQ9NS37 354 aa15.8■□□□□ 0.12
UTRN-206ENST00000421035 DCAF8Q5TAQ9 597 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms